RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 PIP4P2Q8N4L2 257 aa19.42■□□□□ 0.7
FBXO28-204ENST00000519894 ABCC12Q96J65 1359 aa19.42■□□□□ 0.7
FBXO28-204ENST00000519894 KIF3CO14782 793 aa19.41■□□□□ 0.7
FBXO28-204ENST00000519894 NTSR2O95665 410 aa19.41■□□□□ 0.7
FBXO28-204ENST00000519894 ARFGEF2Q9Y6D5 1785 aa19.41■□□□□ 0.7
FBXO28-204ENST00000519894 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
FBXO28-204ENST00000519894 TNRC6CQ9HCJ0 1690 aaKnown RBP19.4■□□□□ 0.7
FBXO28-204ENST00000519894 LMNB1P20700 586 aa19.4■□□□□ 0.7
FBXO28-204ENST00000519894 CCDC27Q2M243 656 aa19.4■□□□□ 0.7
FBXO28-204ENST00000519894 PARP10Q53GL7 1025 aa19.4■□□□□ 0.7
FBXO28-204ENST00000519894 C7orf43Q8WVR3 580 aa19.4■□□□□ 0.7
FBXO28-204ENST00000519894 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.7
FBXO28-204ENST00000519894 CCDC88AQ3V6T2 1871 aa19.39■□□□□ 0.7
FBXO28-204ENST00000519894 ELL2O00472 640 aaPredicted RBP19.39■□□□□ 0.69
FBXO28-204ENST00000519894 PPP1R42Q7Z4L9 355 aa19.39■□□□□ 0.69
FBXO28-204ENST00000519894 WWC1Q8IX03 1113 aa19.39■□□□□ 0.69
FBXO28-204ENST00000519894 DBF4Q9UBU7 674 aaPredicted RBP19.39■□□□□ 0.69
FBXO28-204ENST00000519894 TCIRG1Q13488 830 aa19.38■□□□□ 0.69
FBXO28-204ENST00000519894 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
FBXO28-204ENST00000519894 HSP90AB3PQ58FF7 597 aa19.38■□□□□ 0.69
FBXO28-204ENST00000519894 C8orf58Q8NAV2 365 aa19.38■□□□□ 0.69
FBXO28-204ENST00000519894 RIC1Q4ADV7 1423 aa19.37■□□□□ 0.69
FBXO28-204ENST00000519894 REM2Q8IYK8 340 aaPredicted RBP19.37■□□□□ 0.69
FBXO28-204ENST00000519894 UTP14AQ9BVJ6 771 aaKnown RBP19.37■□□□□ 0.69
FBXO28-204ENST00000519894 NMRK2Q9NPI5 230 aa19.37■□□□□ 0.69
FBXO28-204ENST00000519894 LTBP3Q9NS15 1303 aa19.36■□□□□ 0.69
FBXO28-204ENST00000519894 ALDH1B1P30837 517 aa19.36■□□□□ 0.69
FBXO28-204ENST00000519894 SOGA3Q5TF21 947 aa19.36■□□□□ 0.69
FBXO28-204ENST00000519894 ANKRD13DQ6ZTN6 518 aa19.36■□□□□ 0.69
FBXO28-204ENST00000519894 NLRP10Q86W26 655 aa19.36■□□□□ 0.69
FBXO28-204ENST00000519894 PLBD2Q8NHP8 589 aa19.36■□□□□ 0.69
FBXO28-204ENST00000519894 HYPKQ9NX55 129 aa19.36■□□□□ 0.69
FBXO28-204ENST00000519894 ANKRD36CQ5JPF3 1778 aa19.36■□□□□ 0.69
FBXO28-204ENST00000519894 ZC3H4Q9UPT8 1303 aaKnown RBP19.35■□□□□ 0.69
FBXO28-204ENST00000519894 SLC10A5Q5PT55 438 aa19.35■□□□□ 0.69
FBXO28-204ENST00000519894 C3orf67Q6ZVT6 689 aa19.35■□□□□ 0.69
FBXO28-204ENST00000519894 TSPYL6Q8N831 410 aa19.35■□□□□ 0.69
FBXO28-204ENST00000519894 TAOK3Q9H2K8 898 aa19.35■□□□□ 0.69
FBXO28-204ENST00000519894 HOXA10P31260 410 aaPredicted RBP19.34■□□□□ 0.69
FBXO28-204ENST00000519894 CCDC93Q567U6 631 aa19.34■□□□□ 0.69
FBXO28-204ENST00000519894 OLFM4Q6UX06 510 aa19.34■□□□□ 0.69
FBXO28-204ENST00000519894 TSR2Q969E8 191 aaKnown RBP19.34■□□□□ 0.69
FBXO28-204ENST00000519894 KDM2BQ8NHM5 1336 aa19.33■□□□□ 0.69
FBXO28-204ENST00000519894 PHAXQ9H814 394 aaKnown RBP19.33■□□□□ 0.68
FBXO28-204ENST00000519894 DICER1Q9UPY3 1922 aaKnown RBP19.32■□□□□ 0.68
FBXO28-204ENST00000519894 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
FBXO28-204ENST00000519894 SYNE4Q8N205 404 aa19.32■□□□□ 0.68
FBXO28-204ENST00000519894 RPGRQ92834 1020 aaKnown RBP19.32■□□□□ 0.68
FBXO28-204ENST00000519894 NLRP3Q96P20 1036 aa19.32■□□□□ 0.68
FBXO28-204ENST00000519894 ISCA1Q9BUE6 129 aa19.32■□□□□ 0.68
FBXO28-204ENST00000519894 RRAGCQ9HB90 399 aa19.32■□□□□ 0.68
FBXO28-204ENST00000519894 SALL2Q9Y467 1007 aaPredicted RBP19.32■□□□□ 0.68
FBXO28-204ENST00000519894 TIAM2Q8IVF5 1701 aa19.31■□□□□ 0.68
FBXO28-204ENST00000519894 IL16Q14005 1332 aa19.31■□□□□ 0.68
FBXO28-204ENST00000519894 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
FBXO28-204ENST00000519894 GLTPD2A6NH11 291 aa19.31■□□□□ 0.68
FBXO28-204ENST00000519894 RBM17Q96I25 401 aaKnown RBP19.31■□□□□ 0.68
FBXO28-204ENST00000519894 CRAMP1Q96RY5 1269 aa19.31■□□□□ 0.68
FBXO28-204ENST00000519894 TRMT112Q9UI30 125 aaKnown RBP19.31■□□□□ 0.68
FBXO28-204ENST00000519894 ZBTB12Q9Y330 459 aaPredicted RBP19.31■□□□□ 0.68
FBXO28-204ENST00000519894 ATP5J2-PTCD1G3V325 749 aa19.3■□□□□ 0.68
FBXO28-204ENST00000519894 FKBP4Q02790 459 aaKnown RBP eCLIP19.3■□□□□ 0.68
FBXO28-204ENST00000519894 CCDC30Q5VVM6 783 aa19.3■□□□□ 0.68
FBXO28-204ENST00000519894 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
FBXO28-204ENST00000519894 SH3TC1Q8TE82 1336 aa19.29■□□□□ 0.68
FBXO28-204ENST00000519894 TOMM70O94826 608 aa19.29■□□□□ 0.68
FBXO28-204ENST00000519894 HCLS1P14317 486 aaPredicted RBP19.29■□□□□ 0.68
FBXO28-204ENST00000519894 RTKN2Q8IZC4 609 aa19.29■□□□□ 0.68
FBXO28-204ENST00000519894 SNED1Q8TER0 1413 aa19.28■□□□□ 0.68
FBXO28-204ENST00000519894 HAX1O00165 279 aa19.28■□□□□ 0.68
FBXO28-204ENST00000519894 RIC3Q7Z5B4 369 aa19.28■□□□□ 0.68
FBXO28-204ENST00000519894 WDR63Q8IWG1 891 aa19.28■□□□□ 0.68
FBXO28-204ENST00000519894 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
FBXO28-204ENST00000519894 LAMB2P55268 1798 aa19.27■□□□□ 0.68
FBXO28-204ENST00000519894 GOLGA2Q08379 1002 aa19.27■□□□□ 0.68
FBXO28-204ENST00000519894 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.68
FBXO28-204ENST00000519894 TWISTNBQ3B726 338 aaPredicted RBP19.27■□□□□ 0.68
FBXO28-204ENST00000519894 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
FBXO28-204ENST00000519894 ZNF277Q9NRM2 450 aaPredicted RBP19.27■□□□□ 0.68
FBXO28-204ENST00000519894 CC2D2BQ6DHV5 1058 aa19.26■□□□□ 0.67
FBXO28-204ENST00000519894 DPY19L2Q6NUT2 758 aa19.26■□□□□ 0.67
FBXO28-204ENST00000519894 POTECB2RU33 542 aa19.25■□□□□ 0.67
FBXO28-204ENST00000519894 TCERG1O14776 1098 aaKnown RBP19.25■□□□□ 0.67
FBXO28-204ENST00000519894 PPEF1O14829 653 aaPredicted RBP19.25■□□□□ 0.67
FBXO28-204ENST00000519894 FAM89AQ96GI7 184 aa19.25■□□□□ 0.67
FBXO28-204ENST00000519894 ABCC4O15439 1325 aa19.25■□□□□ 0.67
FBXO28-204ENST00000519894 FANCIQ9NVI1 1328 aa19.25■□□□□ 0.67
FBXO28-204ENST00000519894 HSPA6P17066 643 aa19.24■□□□□ 0.67
FBXO28-204ENST00000519894 C16orf71Q8IYS4 520 aaPredicted RBP19.24■□□□□ 0.67
FBXO28-204ENST00000519894 RBM46Q8TBY0 533 aaKnown RBP19.24■□□□□ 0.67
FBXO28-204ENST00000519894 PSMD1Q99460 953 aa19.24■□□□□ 0.67
FBXO28-204ENST00000519894 MYD88Q99836 296 aa19.24■□□□□ 0.67
FBXO28-204ENST00000519894 DDX60Q8IY21 1712 aaKnown RBP19.23■□□□□ 0.67
FBXO28-204ENST00000519894 VEGFAP15692 232 aaPredicted RBP19.23■□□□□ 0.67
FBXO28-204ENST00000519894 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
FBXO28-204ENST00000519894 METTL22Q9BUU2 404 aaPredicted RBP19.23■□□□□ 0.67
FBXO28-204ENST00000519894 WDR90Q96KV7 1748 aa19.22■□□□□ 0.67
FBXO28-204ENST00000519894 DDNO94850 711 aaPredicted RBP19.22■□□□□ 0.67
FBXO28-204ENST00000519894 DDX58O95786 925 aaKnown RBP19.22■□□□□ 0.67
FBXO28-204ENST00000519894 GRIPAP1Q4V328 841 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms