RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 ISCA1Q9BUE6 129 aa17.6■□□□□ 0.41
SCUBE2-205ENST00000519535 DBF4Q9UBU7 674 aaPredicted RBP17.6■□□□□ 0.41
SCUBE2-205ENST00000519535 HCLS1P14317 486 aaPredicted RBP17.59■□□□□ 0.41
SCUBE2-205ENST00000519535 SLC10A5Q5PT55 438 aa17.59■□□□□ 0.41
SCUBE2-205ENST00000519535 UTP14AQ9BVJ6 771 aaKnown RBP17.59■□□□□ 0.41
SCUBE2-205ENST00000519535 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
SCUBE2-205ENST00000519535 RIC1Q4ADV7 1423 aa17.58■□□□□ 0.41
SCUBE2-205ENST00000519535 GTF2E1P29083 439 aaPredicted RBP17.58■□□□□ 0.4
SCUBE2-205ENST00000519535 PARP10Q53GL7 1025 aa17.58■□□□□ 0.4
SCUBE2-205ENST00000519535 ANKRD13DQ6ZTN6 518 aa17.58■□□□□ 0.4
SCUBE2-205ENST00000519535 G2E3Q7L622 706 aa17.58■□□□□ 0.4
SCUBE2-205ENST00000519535 PLBD2Q8NHP8 589 aa17.58■□□□□ 0.4
SCUBE2-205ENST00000519535 SBF1O95248 1867 aa17.58■□□□□ 0.4
SCUBE2-205ENST00000519535 COL4A1P02462 1669 aa17.58■□□□□ 0.4
SCUBE2-205ENST00000519535 FANCIQ9NVI1 1328 aa17.57■□□□□ 0.4
SCUBE2-205ENST00000519535 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
SCUBE2-205ENST00000519535 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
SCUBE2-205ENST00000519535 POTECB2RU33 542 aa17.56■□□□□ 0.4
SCUBE2-205ENST00000519535 JARID2Q92833 1246 aaPredicted RBP17.56■□□□□ 0.4
SCUBE2-205ENST00000519535 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
SCUBE2-205ENST00000519535 HYPKQ9NX55 129 aa17.56■□□□□ 0.4
SCUBE2-205ENST00000519535 COL4A5P29400 1685 aa17.55■□□□□ 0.4
SCUBE2-205ENST00000519535 LTBP3Q9NS15 1303 aa17.55■□□□□ 0.4
SCUBE2-205ENST00000519535 TAOK3Q9H2K8 898 aa17.55■□□□□ 0.4
SCUBE2-205ENST00000519535 RRAGCQ9HB90 399 aa17.55■□□□□ 0.4
SCUBE2-205ENST00000519535 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
SCUBE2-205ENST00000519535 IL16Q14005 1332 aa17.54■□□□□ 0.4
SCUBE2-205ENST00000519535 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
SCUBE2-205ENST00000519535 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
SCUBE2-205ENST00000519535 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
SCUBE2-205ENST00000519535 FAM89AQ96GI7 184 aa17.54■□□□□ 0.4
SCUBE2-205ENST00000519535 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
SCUBE2-205ENST00000519535 ABCC4O15439 1325 aa17.53■□□□□ 0.4
SCUBE2-205ENST00000519535 CACNA1SQ13698 1873 aa17.53■□□□□ 0.4
SCUBE2-205ENST00000519535 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
SCUBE2-205ENST00000519535 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
SCUBE2-205ENST00000519535 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
SCUBE2-205ENST00000519535 ZNF521Q96K83 1311 aa17.52■□□□□ 0.4
SCUBE2-205ENST00000519535 EXOSC9Q06265 439 aaKnown RBP17.52■□□□□ 0.4
SCUBE2-205ENST00000519535 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.4
SCUBE2-205ENST00000519535 RPGRQ92834 1020 aaKnown RBP17.52■□□□□ 0.4
SCUBE2-205ENST00000519535 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
SCUBE2-205ENST00000519535 MYD88Q99836 296 aa17.52■□□□□ 0.4
SCUBE2-205ENST00000519535 SH3TC1Q8TE82 1336 aa17.51■□□□□ 0.39
SCUBE2-205ENST00000519535 GLTPD2A6NH11 291 aa17.51■□□□□ 0.39
SCUBE2-205ENST00000519535 VAMP4O75379 141 aa17.51■□□□□ 0.39
SCUBE2-205ENST00000519535 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
SCUBE2-205ENST00000519535 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCUBE2-205ENST00000519535 TRIM28Q13263 835 aaKnown RBP17.51■□□□□ 0.39
SCUBE2-205ENST00000519535 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
SCUBE2-205ENST00000519535 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
SCUBE2-205ENST00000519535 ZNF541Q9H0D2 1346 aa17.5■□□□□ 0.39
SCUBE2-205ENST00000519535 ALDH1B1P30837 517 aa17.5■□□□□ 0.39
SCUBE2-205ENST00000519535 CCDC30Q5VVM6 783 aa17.5■□□□□ 0.39
SCUBE2-205ENST00000519535 RIC3Q7Z5B4 369 aa17.5■□□□□ 0.39
SCUBE2-205ENST00000519535 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
SCUBE2-205ENST00000519535 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
SCUBE2-205ENST00000519535 PPEF1O14829 653 aaPredicted RBP17.49■□□□□ 0.39
SCUBE2-205ENST00000519535 DDNO94850 711 aaPredicted RBP17.49■□□□□ 0.39
SCUBE2-205ENST00000519535 MAP3K2Q9Y2U5 619 aa17.49■□□□□ 0.39
SCUBE2-205ENST00000519535 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
SCUBE2-205ENST00000519535 ZC3H4Q9UPT8 1303 aaKnown RBP17.48■□□□□ 0.39
SCUBE2-205ENST00000519535 PI4KAP2A4QPH2 592 aa17.48■□□□□ 0.39
SCUBE2-205ENST00000519535 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
SCUBE2-205ENST00000519535 PI4KAP1Q8N8J0 262 aa17.48■□□□□ 0.39
SCUBE2-205ENST00000519535 CELF1Q92879 486 aaKnown RBP17.48■□□□□ 0.39
SCUBE2-205ENST00000519535 METTL22Q9BUU2 404 aaPredicted RBP17.48■□□□□ 0.39
SCUBE2-205ENST00000519535 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
SCUBE2-205ENST00000519535 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
SCUBE2-205ENST00000519535 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
SCUBE2-205ENST00000519535 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
SCUBE2-205ENST00000519535 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
SCUBE2-205ENST00000519535 LAMB2P55268 1798 aa17.46■□□□□ 0.39
SCUBE2-205ENST00000519535 IRS4O14654 1257 aaPredicted RBP17.46■□□□□ 0.39
SCUBE2-205ENST00000519535 TOMM70O94826 608 aa17.46■□□□□ 0.39
SCUBE2-205ENST00000519535 POTEIP0CG38 1075 aa17.46■□□□□ 0.39
SCUBE2-205ENST00000519535 POTEJP0CG39 1038 aa17.46■□□□□ 0.39
SCUBE2-205ENST00000519535 RTKN2Q8IZC4 609 aa17.46■□□□□ 0.39
SCUBE2-205ENST00000519535 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
SCUBE2-205ENST00000519535 CCDC88AQ3V6T2 1871 aa17.46■□□□□ 0.38
SCUBE2-205ENST00000519535 IARSP41252 1262 aaKnown RBP17.45■□□□□ 0.38
SCUBE2-205ENST00000519535 SF3B3Q15393 1217 aaKnown RBP17.45■□□□□ 0.38
SCUBE2-205ENST00000519535 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
SCUBE2-205ENST00000519535 KSR2Q6VAB6 950 aa17.45■□□□□ 0.38
SCUBE2-205ENST00000519535 PSMD1Q99460 953 aa17.45■□□□□ 0.38
SCUBE2-205ENST00000519535 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
SCUBE2-205ENST00000519535 HTRA3P83110 453 aa17.44■□□□□ 0.38
SCUBE2-205ENST00000519535 GRAPQ13588 217 aa17.44■□□□□ 0.38
SCUBE2-205ENST00000519535 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
SCUBE2-205ENST00000519535 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
SCUBE2-205ENST00000519535 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
SCUBE2-205ENST00000519535 TAF1P21675 1872 aa17.44■□□□□ 0.38
SCUBE2-205ENST00000519535 FZD9O00144 591 aa17.43■□□□□ 0.38
SCUBE2-205ENST00000519535 HSPA6P17066 643 aa17.43■□□□□ 0.38
SCUBE2-205ENST00000519535 FLIIQ13045 1269 aa17.43■□□□□ 0.38
SCUBE2-205ENST00000519535 RBM46Q8TBY0 533 aaKnown RBP17.43■□□□□ 0.38
SCUBE2-205ENST00000519535 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
SCUBE2-205ENST00000519535 DUOX1Q9NRD9 1551 aa17.43■□□□□ 0.38
SCUBE2-205ENST00000519535 NEURL1BA8MQ27 555 aa17.42■□□□□ 0.38
SCUBE2-205ENST00000519535 F6X3S4 739 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms