RNA–Protein interactions for RNA: ENST00000519503.5

CHMP7-205, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-205ENST00000519503 NECTIN2Q92692 538 aa28.24■■■□□ 2.11
CHMP7-205ENST00000519503 CFAP44Q96MT7 982 aa28.24■■■□□ 2.11
CHMP7-205ENST00000519503 COPS6Q7L5N1 327 aa28.23■■■□□ 2.11
CHMP7-205ENST00000519503 CALD1Q05682 793 aaKnown RBP28.22■■■□□ 2.11
CHMP7-205ENST00000519503 KRT24Q2M2I5 525 aa28.22■■■□□ 2.11
CHMP7-205ENST00000519503 CC2D2BQ6DHV5 1058 aa28.22■■■□□ 2.11
CHMP7-205ENST00000519503 XAGE3Q8WTP9 111 aa28.22■■■□□ 2.11
CHMP7-205ENST00000519503 UTP14AQ9BVJ6 771 aaKnown RBP28.22■■■□□ 2.11
CHMP7-205ENST00000519503 HDGFL1Q5TGJ6 251 aa28.21■■■□□ 2.11
CHMP7-205ENST00000519503 AIMP1Q12904 312 aaKnown RBP28.2■■■□□ 2.1
CHMP7-205ENST00000519503 GRIPAP1Q4V328 841 aa28.2■■■□□ 2.1
CHMP7-205ENST00000519503 RBM17Q96I25 401 aaKnown RBP28.2■■■□□ 2.1
CHMP7-205ENST00000519503 APAF1O14727 1248 aa28.19■■■□□ 2.1
CHMP7-205ENST00000519503 OLFM4Q6UX06 510 aa28.19■■■□□ 2.1
CHMP7-205ENST00000519503 NLRP3Q96P20 1036 aa28.19■■■□□ 2.1
CHMP7-205ENST00000519503 CRAMP1Q96RY5 1269 aa28.19■■■□□ 2.1
CHMP7-205ENST00000519503 ZNF277Q9NRM2 450 aaPredicted RBP28.19■■■□□ 2.1
CHMP7-205ENST00000519503 CHPF2Q9P2E5 772 aa28.19■■■□□ 2.1
CHMP7-205ENST00000519503 SCN4AP35499 1836 aa28.19■■■□□ 2.1
CHMP7-205ENST00000519503 SNED1Q8TER0 1413 aa28.18■■■□□ 2.1
CHMP7-205ENST00000519503 POTECB2RU33 542 aa28.18■■■□□ 2.1
CHMP7-205ENST00000519503 SLC10A5Q5PT55 438 aa28.18■■■□□ 2.1
CHMP7-205ENST00000519503 PSMD1Q99460 953 aa28.18■■■□□ 2.1
CHMP7-205ENST00000519503 DBF4Q9UBU7 674 aaPredicted RBP28.18■■■□□ 2.1
CHMP7-205ENST00000519503 LAMB2P55268 1798 aa28.17■■■□□ 2.1
CHMP7-205ENST00000519503 MBIPQ9NS73 344 aa28.17■■■□□ 2.1
CHMP7-205ENST00000519503 IFT57Q9NWB7 429 aa28.17■■■□□ 2.1
CHMP7-205ENST00000519503 ZNF853P0CG23 659 aa28.16■■■□□ 2.1
CHMP7-205ENST00000519503 TCIRG1Q13488 830 aa28.16■■■□□ 2.1
CHMP7-205ENST00000519503 DDNO94850 711 aaPredicted RBP28.15■■■□□ 2.1
CHMP7-205ENST00000519503 IARSP41252 1262 aaKnown RBP28.15■■■□□ 2.1
CHMP7-205ENST00000519503 GNAI1P63096 354 aa28.15■■■□□ 2.1
CHMP7-205ENST00000519503 DUSP27Q5VZP5 1158 aa28.15■■■□□ 2.1
CHMP7-205ENST00000519503 NLRP10Q86W26 655 aa28.15■■■□□ 2.1
CHMP7-205ENST00000519503 SYNE4Q8N205 404 aa28.15■■■□□ 2.1
CHMP7-205ENST00000519503 DNAJC5GQ8N7S2 189 aa28.15■■■□□ 2.1
CHMP7-205ENST00000519503 IQCA1LA6NCM1 817 aa28.14■■■□□ 2.1
CHMP7-205ENST00000519503 PPEF1O14829 653 aaPredicted RBP28.14■■■□□ 2.1
CHMP7-205ENST00000519503 L3MBTL3Q96JM7 780 aaPredicted RBP28.14■■■□□ 2.1
CHMP7-205ENST00000519503 HYPKQ9NX55 129 aa28.14■■■□□ 2.1
CHMP7-205ENST00000519503 C3orf67Q6ZVT6 689 aa28.13■■■□□ 2.09
CHMP7-205ENST00000519503 PLBD2Q8NHP8 589 aa28.13■■■□□ 2.09
CHMP7-205ENST00000519503 TMX4Q9H1E5 349 aaPredicted RBP28.12■■■□□ 2.09
CHMP7-205ENST00000519503 TRMT112Q9UI30 125 aaKnown RBP28.12■■■□□ 2.09
CHMP7-205ENST00000519503 SH3TC1Q8TE82 1336 aa28.12■■■□□ 2.09
CHMP7-205ENST00000519503 ANKRD13DQ6ZTN6 518 aa28.11■■■□□ 2.09
CHMP7-205ENST00000519503 JDP2Q8WYK2 163 aa28.1■■■□□ 2.09
CHMP7-205ENST00000519503 FZD9O00144 591 aa28.09■■■□□ 2.09
CHMP7-205ENST00000519503 CHMP4AQ9BY43 222 aa28.09■■■□□ 2.09
CHMP7-205ENST00000519503 ZNF541Q9H0D2 1346 aa28.09■■■□□ 2.09
CHMP7-205ENST00000519503 DDX60Q8IY21 1712 aaKnown RBP28.08■■■□□ 2.09
CHMP7-205ENST00000519503 ABCC4O15439 1325 aa28.08■■■□□ 2.09
CHMP7-205ENST00000519503 CHADLQ6NUI6 762 aa28.07■■■□□ 2.08
CHMP7-205ENST00000519503 KLRG1Q96E93 195 aa28.07■■■□□ 2.08
CHMP7-205ENST00000519503 ATP6V0A2Q9Y487 856 aa28.07■■■□□ 2.08
CHMP7-205ENST00000519503 HCLS1P14317 486 aaPredicted RBP28.06■■■□□ 2.08
CHMP7-205ENST00000519503 HTRA3P83110 453 aa28.06■■■□□ 2.08
CHMP7-205ENST00000519503 TCERG1O14776 1098 aaKnown RBP28.05■■■□□ 2.08
CHMP7-205ENST00000519503 BBOX1O75936 387 aa28.05■■■□□ 2.08
CHMP7-205ENST00000519503 GPC2Q8N158 579 aa28.05■■■□□ 2.08
CHMP7-205ENST00000519503 ISCA1Q9BUE6 129 aa28.05■■■□□ 2.08
CHMP7-205ENST00000519503 TAF1DQ9H5J8 278 aaPredicted RBP28.05■■■□□ 2.08
CHMP7-205ENST00000519503 DDX46Q7L014 1031 aaKnown RBP28.04■■■□□ 2.08
CHMP7-205ENST00000519503 PCNTO95613 3336 aa28.03■■■□□ 2.08
CHMP7-205ENST00000519503 EIF6P56537 245 aaKnown RBP28.03■■■□□ 2.08
CHMP7-205ENST00000519503 GOLGA2Q08379 1002 aa28.03■■■□□ 2.08
CHMP7-205ENST00000519503 LDHDQ86WU2 507 aa28.03■■■□□ 2.08
CHMP7-205ENST00000519503 LARGE2Q8N3Y3 721 aa28.03■■■□□ 2.08
CHMP7-205ENST00000519503 VPS33BQ9H267 617 aa28.03■■■□□ 2.08
CHMP7-205ENST00000519503 HACL1Q9UJ83 578 aa28.03■■■□□ 2.08
CHMP7-205ENST00000519503 COL4A5P29400 1685 aa28.03■■■□□ 2.08
CHMP7-205ENST00000519503 TRIM28Q13263 835 aaKnown RBP28.02■■■□□ 2.08
CHMP7-205ENST00000519503 CCDC27Q2M243 656 aa28.02■■■□□ 2.08
CHMP7-205ENST00000519503 CCDC184Q52MB2 194 aa28.02■■■□□ 2.08
CHMP7-205ENST00000519503 ZNF316A6NFI3 1004 aaPredicted RBP28.01■■■□□ 2.07
CHMP7-205ENST00000519503 TMC4Q7Z404 712 aa28.01■■■□□ 2.07
CHMP7-205ENST00000519503 SUPT20HQ8NEM7 779 aa28.01■■■□□ 2.07
CHMP7-205ENST00000519503 TAF1P21675 1872 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 ATP5J2-PTCD1G3V325 749 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 ELL2O00472 640 aaPredicted RBP28■■■□□ 2.07
CHMP7-205ENST00000519503 POTEIP0CG38 1075 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 POTEJP0CG39 1038 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 GRAPQ13588 217 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 RIC3Q7Z5B4 369 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 SP8Q8IXZ3 490 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 JMYQ8N9B5 988 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 GRAPLQ8TC17 118 aaPredicted RBP28■■■□□ 2.07
CHMP7-205ENST00000519503 LRRC37AA6NMS7 1700 aa28■■■□□ 2.07
CHMP7-205ENST00000519503 ADAMTSL1Q8N6G6 1762 aa27.99■■■□□ 2.07
CHMP7-205ENST00000519503 ANP32CO43423 234 aa27.99■■■□□ 2.07
CHMP7-205ENST00000519503 CCDC30Q5VVM6 783 aa27.99■■■□□ 2.07
CHMP7-205ENST00000519503 PNMA8AQ86V59 439 aaPredicted RBP27.99■■■□□ 2.07
CHMP7-205ENST00000519503 NIM1KQ8IY84 436 aa27.99■■■□□ 2.07
CHMP7-205ENST00000519503 C8orf58Q8NAV2 365 aa27.99■■■□□ 2.07
CHMP7-205ENST00000519503 PPIP5K2O43314 1243 aa27.98■■■□□ 2.07
CHMP7-205ENST00000519503 EPHX2P34913 555 aa27.98■■■□□ 2.07
CHMP7-205ENST00000519503 NCBP3Q53F19 620 aaKnown RBP27.98■■■□□ 2.07
CHMP7-205ENST00000519503 FAM89AQ96GI7 184 aa27.98■■■□□ 2.07
CHMP7-205ENST00000519503 RTFDC1Q9BY42 306 aaPredicted RBP27.98■■■□□ 2.07
CHMP7-205ENST00000519503 DPP8Q6V1X1 898 aaPredicted RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms