RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
MSR1-210ENST00000519060 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
MSR1-210ENST00000519060 UBR3Q6ZT12 1888 aa12.85□□□□□ -0.35
MSR1-210ENST00000519060 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
MSR1-210ENST00000519060 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
MSR1-210ENST00000519060 GYS1P13807 737 aa12.83□□□□□ -0.36
MSR1-210ENST00000519060 DPEP1P16444 411 aa12.83□□□□□ -0.36
MSR1-210ENST00000519060 PLEKHO1Q53GL0 409 aaPredicted RBP12.83□□□□□ -0.36
MSR1-210ENST00000519060 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
MSR1-210ENST00000519060 SPNS2Q8IVW8 549 aa12.83□□□□□ -0.36
MSR1-210ENST00000519060 DCAF5Q96JK2 942 aa12.83□□□□□ -0.36
MSR1-210ENST00000519060 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
MSR1-210ENST00000519060 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
MSR1-210ENST00000519060 RFC4P35249 363 aa12.82□□□□□ -0.36
MSR1-210ENST00000519060 CABP4P57796 275 aa12.82□□□□□ -0.36
MSR1-210ENST00000519060 TRIM26Q12899 539 aaPredicted RBP12.82□□□□□ -0.36
MSR1-210ENST00000519060 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
MSR1-210ENST00000519060 KIF20BQ96Q89 1820 aa12.82□□□□□ -0.36
MSR1-210ENST00000519060 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
MSR1-210ENST00000519060 KCNA3P22001 575 aa12.81□□□□□ -0.36
MSR1-210ENST00000519060 PXYLP1Q8TE99 480 aa12.81□□□□□ -0.36
MSR1-210ENST00000519060 PANK3Q9H999 370 aa12.81□□□□□ -0.36
MSR1-210ENST00000519060 CCDC87Q9NVE4 849 aa12.81□□□□□ -0.36
MSR1-210ENST00000519060 PARP3Q9Y6F1 533 aa12.81□□□□□ -0.36
MSR1-210ENST00000519060 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
MSR1-210ENST00000519060 MTHFSP49914 203 aa12.8□□□□□ -0.36
MSR1-210ENST00000519060 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
MSR1-210ENST00000519060 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
MSR1-210ENST00000519060 METTL3Q86U44 580 aaKnown RBP12.8□□□□□ -0.36
MSR1-210ENST00000519060 DNAJC5GQ8N7S2 189 aa12.8□□□□□ -0.36
MSR1-210ENST00000519060 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
MSR1-210ENST00000519060 CCDC102AQ96A19 550 aa12.8□□□□□ -0.36
MSR1-210ENST00000519060 CNTNAP4Q9C0A0 1308 aa12.8□□□□□ -0.36
MSR1-210ENST00000519060 KDRP35968 1356 aa12.8□□□□□ -0.36
MSR1-210ENST00000519060 GOLGA8CPA6NN73 597 aa12.79□□□□□ -0.36
MSR1-210ENST00000519060 TOMM70O94826 608 aa12.79□□□□□ -0.36
MSR1-210ENST00000519060 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
MSR1-210ENST00000519060 SLC24A3Q9HC58 644 aa12.79□□□□□ -0.36
MSR1-210ENST00000519060 CRKLP46109 303 aaKnown RBP12.78□□□□□ -0.36
MSR1-210ENST00000519060 APLP1P51693 650 aa12.78□□□□□ -0.36
MSR1-210ENST00000519060 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
MSR1-210ENST00000519060 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
MSR1-210ENST00000519060 SRP68Q9UHB9 627 aaKnown RBP12.78□□□□□ -0.36
MSR1-210ENST00000519060 C9orf131Q5VYM1 1079 aa12.77□□□□□ -0.37
MSR1-210ENST00000519060 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
MSR1-210ENST00000519060 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
MSR1-210ENST00000519060 RCCD1A6NED2 376 aa12.76□□□□□ -0.37
MSR1-210ENST00000519060 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
MSR1-210ENST00000519060 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
MSR1-210ENST00000519060 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
MSR1-210ENST00000519060 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
MSR1-210ENST00000519060 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
MSR1-210ENST00000519060 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
MSR1-210ENST00000519060 HSPA5P11021 654 aaKnown RBP12.75□□□□□ -0.37
MSR1-210ENST00000519060 DNAJB2P25686 324 aa12.75□□□□□ -0.37
MSR1-210ENST00000519060 TM4SF1P30408 202 aa12.75□□□□□ -0.37
MSR1-210ENST00000519060 DDR1Q08345 913 aa12.75□□□□□ -0.37
MSR1-210ENST00000519060 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
MSR1-210ENST00000519060 PHOX2BQ99453 314 aa12.75□□□□□ -0.37
MSR1-210ENST00000519060 ANKRD26Q9UPS8 1709 aa12.75□□□□□ -0.37
MSR1-210ENST00000519060 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
MSR1-210ENST00000519060 CHRNA5P30532 468 aa12.74□□□□□ -0.37
MSR1-210ENST00000519060 IL13P35225 146 aa12.74□□□□□ -0.37
MSR1-210ENST00000519060 EIF4G2P78344 907 aaKnown RBP eCLIP12.74□□□□□ -0.37
MSR1-210ENST00000519060 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
MSR1-210ENST00000519060 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
MSR1-210ENST00000519060 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
MSR1-210ENST00000519060 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
MSR1-210ENST00000519060 USP42Q9H9J4 1324 aaKnown RBP12.73□□□□□ -0.37
MSR1-210ENST00000519060 PCGF6Q9BYE7 350 aa12.73□□□□□ -0.37
MSR1-210ENST00000519060 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
MSR1-210ENST00000519060 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
MSR1-210ENST00000519060 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
MSR1-210ENST00000519060 ANKK1Q8NFD2 765 aa12.72□□□□□ -0.37
MSR1-210ENST00000519060 WNT2BQ93097 391 aa12.72□□□□□ -0.37
MSR1-210ENST00000519060 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
MSR1-210ENST00000519060 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.37
MSR1-210ENST00000519060 TRIM66O15016 1216 aa12.71□□□□□ -0.37
MSR1-210ENST00000519060 ZPR1O75312 459 aa12.71□□□□□ -0.37
MSR1-210ENST00000519060 HTRA3P83110 453 aa12.71□□□□□ -0.37
MSR1-210ENST00000519060 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
MSR1-210ENST00000519060 TMEM134Q9H6X4 195 aa12.71□□□□□ -0.37
MSR1-210ENST00000519060 RNF181Q9P0P0 153 aa12.71□□□□□ -0.37
MSR1-210ENST00000519060 CYP19A1P11511 503 aaPredicted RBP12.7□□□□□ -0.38
MSR1-210ENST00000519060 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
MSR1-210ENST00000519060 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
MSR1-210ENST00000519060 SAMD7Q7Z3H4 446 aa12.7□□□□□ -0.38
MSR1-210ENST00000519060 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
MSR1-210ENST00000519060 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
MSR1-210ENST00000519060 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
MSR1-210ENST00000519060 KNSTRNQ9Y448 316 aa12.7□□□□□ -0.38
MSR1-210ENST00000519060 C4AP0C0L4 1744 aa12.7□□□□□ -0.38
MSR1-210ENST00000519060 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
MSR1-210ENST00000519060 CLSPNQ9HAW4 1339 aa12.69□□□□□ -0.38
MSR1-210ENST00000519060 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
MSR1-210ENST00000519060 FSTL1Q12841 308 aa12.69□□□□□ -0.38
MSR1-210ENST00000519060 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
MSR1-210ENST00000519060 NFIXQ14938 502 aa12.69□□□□□ -0.38
MSR1-210ENST00000519060 SWT1Q5T5J6 900 aaKnown RBP12.69□□□□□ -0.38
MSR1-210ENST00000519060 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms