RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 RAB44Q7Z6P3 723 aaPredicted RBP7.24□□□□□ -1.25
SKP1-205ENST00000519054 TREML1Q86YW5 311 aa7.24□□□□□ -1.25
SKP1-205ENST00000519054 GOLGA6L1Q8N7Z2 621 aa7.24□□□□□ -1.25
SKP1-205ENST00000519054 GDF2Q9UK05 429 aaPredicted RBP7.24□□□□□ -1.25
SKP1-205ENST00000519054 DNMT3AQ9Y6K1 912 aaPredicted RBP7.24□□□□□ -1.25
SKP1-205ENST00000519054 TNFRSF10BO14763 440 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 OIP5O43482 229 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 ARHGEF15O94989 841 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 BRD2P25440 801 aaKnown RBP7.23□□□□□ -1.25
SKP1-205ENST00000519054 INPP5BP32019 993 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 FAM26DQ5JW98 314 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 ZNF468Q5VIY5 522 aaPredicted RBP7.23□□□□□ -1.25
SKP1-205ENST00000519054 C1orf229Q6ZS94 237 aaPredicted RBP7.23□□□□□ -1.25
SKP1-205ENST00000519054 SYT9Q86SS6 491 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 ETFBKMTQ8IXQ9 262 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 GALNT6Q8NCL4 622 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 KLF15Q9UIH9 416 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 USP20Q9Y2K6 914 aa7.23□□□□□ -1.25
SKP1-205ENST00000519054 EPB42P16452 691 aa7.22□□□□□ -1.25
SKP1-205ENST00000519054 ADH6P28332 368 aa7.22□□□□□ -1.25
SKP1-205ENST00000519054 GRNP28799 593 aaKnown RBP7.22□□□□□ -1.25
SKP1-205ENST00000519054 ARSDP51689 593 aa7.22□□□□□ -1.25
SKP1-205ENST00000519054 SLCO4C1Q6ZQN7 724 aa7.22□□□□□ -1.25
SKP1-205ENST00000519054 ENAMQ9NRM1 1142 aa7.22□□□□□ -1.25
SKP1-205ENST00000519054 ADAMTS8Q9UP79 889 aa7.22□□□□□ -1.25
SKP1-205ENST00000519054 SHISA8B8ZZ34 492 aa7.21□□□□□ -1.26
SKP1-205ENST00000519054 OPLAHO14841 1288 aa7.21□□□□□ -1.26
SKP1-205ENST00000519054 FCHSD1Q86WN1 690 aa7.21□□□□□ -1.26
SKP1-205ENST00000519054 NEDD1Q8NHV4 660 aa7.21□□□□□ -1.26
SKP1-205ENST00000519054 EDARADDQ8WWZ3 215 aa7.21□□□□□ -1.26
SKP1-205ENST00000519054 BHMTQ93088 406 aa7.21□□□□□ -1.26
SKP1-205ENST00000519054 AVENQ9NQS1 362 aaPredicted RBP7.21□□□□□ -1.26
SKP1-205ENST00000519054 EPXP11678 715 aa7.2□□□□□ -1.26
SKP1-205ENST00000519054 NEUROD1Q13562 356 aa7.2□□□□□ -1.26
SKP1-205ENST00000519054 RGL4Q8IZJ4 473 aa7.2□□□□□ -1.26
SKP1-205ENST00000519054 GTF3C2Q8WUA4 911 aaPredicted RBP7.2□□□□□ -1.26
SKP1-205ENST00000519054 LRRC4BQ9NT99 713 aa7.2□□□□□ -1.26
SKP1-205ENST00000519054 STIM2Q9P246 746 aa7.2□□□□□ -1.26
SKP1-205ENST00000519054 ZBTB39O15060 712 aa7.19□□□□□ -1.26
SKP1-205ENST00000519054 AMPD1P23109 780 aa7.19□□□□□ -1.26
SKP1-205ENST00000519054 MTMR3Q13615 1198 aa7.19□□□□□ -1.26
SKP1-205ENST00000519054 B4GALNT3Q6L9W6 998 aa7.19□□□□□ -1.26
SKP1-205ENST00000519054 KRT25Q7Z3Z0 450 aa7.19□□□□□ -1.26
SKP1-205ENST00000519054 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
SKP1-205ENST00000519054 HELQQ8TDG4 1101 aa7.19□□□□□ -1.26
SKP1-205ENST00000519054 PNMA5Q96PV4 448 aa7.19□□□□□ -1.26
SKP1-205ENST00000519054 GSX2Q9BZM3 304 aa7.19□□□□□ -1.26
SKP1-205ENST00000519054 RTCBQ9Y3I0 505 aaKnown RBP7.19□□□□□ -1.26
SKP1-205ENST00000519054 SIN3BO75182 1162 aa7.18□□□□□ -1.26
SKP1-205ENST00000519054 MARSP56192 900 aaKnown RBP7.18□□□□□ -1.26
SKP1-205ENST00000519054 CCINQ13939 588 aa7.18□□□□□ -1.26
SKP1-205ENST00000519054 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.18□□□□□ -1.26
SKP1-205ENST00000519054 ABL1P00519 1130 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 NFKB1P19838 968 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 ZAP70P43403 619 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 PDE4CQ08493 712 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 TBC1D8BQ0IIM8 1120 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 ABTB2Q8N961 1025 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 IGFLR1Q9H665 355 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 RRAGCQ9HB90 399 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 ANO2Q9NQ90 1003 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 MTMR7Q9Y216 660 aa7.17□□□□□ -1.26
SKP1-205ENST00000519054 SASH3O75995 380 aa7.16□□□□□ -1.26
SKP1-205ENST00000519054 ATCAYQ86WG3 371 aa7.16□□□□□ -1.26
SKP1-205ENST00000519054 GPR152Q8TDT2 470 aa7.16□□□□□ -1.26
SKP1-205ENST00000519054 BTBD6Q96KE9 485 aa7.16□□□□□ -1.26
SKP1-205ENST00000519054 ELOA3CA0A087WX78 387 aaPredicted RBP7.15□□□□□ -1.26
SKP1-205ENST00000519054 ELOA3DA6NLF2 546 aaPredicted RBP7.15□□□□□ -1.26
SKP1-205ENST00000519054 XYLBO75191 536 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 MPSTP25325 297 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 TARSP26639 723 aaKnown RBP7.15□□□□□ -1.26
SKP1-205ENST00000519054 ZNF211Q13398 564 aaPredicted RBP7.15□□□□□ -1.26
SKP1-205ENST00000519054 ELOA3BQ3SY89 546 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 CHSY3Q70JA7 882 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 ELOA3Q8NG57 546 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 PIK3R5Q8WYR1 880 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 TNFRSF25Q93038 417 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 UBE2OQ9C0C9 1292 aaKnown RBP7.15□□□□□ -1.26
SKP1-205ENST00000519054 ZFATQ9P243 1243 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
SKP1-205ENST00000519054 ADARB2-AS1A8MUL3 147 aa7.14□□□□□ -1.27
SKP1-205ENST00000519054 RARAP10276 462 aa7.14□□□□□ -1.27
SKP1-205ENST00000519054 ALAS2P22557 587 aa7.14□□□□□ -1.27
SKP1-205ENST00000519054 ARID4AP29374 1257 aaPredicted RBP7.14□□□□□ -1.27
SKP1-205ENST00000519054 ADH7P40394 386 aa7.14□□□□□ -1.27
SKP1-205ENST00000519054 SERPINB4P48594 390 aa7.14□□□□□ -1.27
SKP1-205ENST00000519054 SNRPNP63162 240 aaKnown RBP7.14□□□□□ -1.27
SKP1-205ENST00000519054 TRIP4Q15650 581 aaPredicted RBP7.14□□□□□ -1.27
SKP1-205ENST00000519054 CNTNAP5Q8WYK1 1306 aa7.14□□□□□ -1.27
SKP1-205ENST00000519054 MDFIQ99750 246 aa7.14□□□□□ -1.27
SKP1-205ENST00000519054 FAM13BQ9NYF5 915 aa7.14□□□□□ -1.27
SKP1-205ENST00000519054 NOM1Q5C9Z4 860 aaKnown RBP7.13□□□□□ -1.27
SKP1-205ENST00000519054 PODNQ7Z5L7 613 aa7.13□□□□□ -1.27
SKP1-205ENST00000519054 SCARF2Q96GP6 870 aaPredicted RBP7.13□□□□□ -1.27
SKP1-205ENST00000519054 EFCC1Q9HA90 598 aa7.13□□□□□ -1.27
SKP1-205ENST00000519054 C11orf16Q9NQ32 467 aa7.13□□□□□ -1.27
SKP1-205ENST00000519054 UBAP1LF5GYI3 381 aa7.12□□□□□ -1.27
SKP1-205ENST00000519054 EGFRP00533 1210 aa7.12□□□□□ -1.27
SKP1-205ENST00000519054 HOXB4P17483 251 aaPredicted RBP7.12□□□□□ -1.27
SKP1-205ENST00000519054 EIF1AXP47813 144 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms