RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ABCC12	Q96J65	1359 aa		31.18	■■■□□ 2.58
CNOT7-204	ENST00000518885	NLRP3	Q96P20	1036 aa		31.18	■■■□□ 2.58
CNOT7-204	ENST00000518885	LTBP3	Q9NS15	1303 aa		31.18	■■■□□ 2.58
CNOT7-204	ENST00000518885	CCDC93	Q567U6	631 aa		31.17	■■■□□ 2.58
CNOT7-204	ENST00000518885	C8orf58	Q8NAV2	365 aa		31.17	■■■□□ 2.58
CNOT7-204	ENST00000518885	TAOK3	Q9H2K8	898 aa		31.17	■■■□□ 2.58
CNOT7-204	ENST00000518885	ANKRD36C	Q5JPF3	1778 aa		31.17	■■■□□ 2.58
CNOT7-204	ENST00000518885	NFKBIE	O00221	500 aa		31.16	■■■□□ 2.58
CNOT7-204	ENST00000518885	DDX58	O95786	925 aa	Known RBP	31.16	■■■□□ 2.58
CNOT7-204	ENST00000518885	NLRP10	Q86W26	655 aa		31.16	■■■□□ 2.58
CNOT7-204	ENST00000518885	TSR2	Q969E8	191 aa	Known RBP	31.16	■■■□□ 2.58
CNOT7-204	ENST00000518885	RBM17	Q96I25	401 aa	Known RBP	31.16	■■■□□ 2.58
CNOT7-204	ENST00000518885	STK31	Q9BXU1	1019 aa		31.16	■■■□□ 2.58
CNOT7-204	ENST00000518885	TRMT112	Q9UI30	125 aa	Known RBP	31.15	■■■□□ 2.58
CNOT7-204	ENST00000518885	SLC10A5	Q5PT55	438 aa		31.14	■■■□□ 2.58
CNOT7-204	ENST00000518885	RIC3	Q7Z5B4	369 aa		31.14	■■■□□ 2.58
CNOT7-204	ENST00000518885	RTKN2	Q8IZC4	609 aa		31.14	■■■□□ 2.58
CNOT7-204	ENST00000518885	HOXA10	P31260	410 aa	Predicted RBP	31.13	■■■□□ 2.57
CNOT7-204	ENST00000518885	TMX4	Q9H1E5	349 aa	Predicted RBP	31.13	■■■□□ 2.57
CNOT7-204	ENST00000518885	SH3TC1	Q8TE82	1336 aa		31.13	■■■□□ 2.57
CNOT7-204	ENST00000518885	SLX4	Q8IY92	1834 aa		31.12	■■■□□ 2.57
CNOT7-204	ENST00000518885	SBF1	O95248	1867 aa		31.12	■■■□□ 2.57
CNOT7-204	ENST00000518885	SENP3-EIF4A1	A0A087X0R7	540 aa		31.12	■■■□□ 2.57
CNOT7-204	ENST00000518885	GRIPAP1	Q4V328	841 aa		31.12	■■■□□ 2.57
CNOT7-204	ENST00000518885	CC2D2B	Q6DHV5	1058 aa		31.12	■■■□□ 2.57
CNOT7-204	ENST00000518885	SALL2	Q9Y467	1007 aa	Predicted RBP	31.12	■■■□□ 2.57
CNOT7-204	ENST00000518885	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.12	■■■□□ 2.57
CNOT7-204	ENST00000518885	CACNA1S	Q13698	1873 aa		31.12	■■■□□ 2.57
CNOT7-204	ENST00000518885	TWISTNB	Q3B726	338 aa	Predicted RBP	31.11	■■■□□ 2.57
CNOT7-204	ENST00000518885	CRAMP1	Q96RY5	1269 aa		31.11	■■■□□ 2.57
CNOT7-204	ENST00000518885	C7orf43	Q8WVR3	580 aa		31.1	■■■□□ 2.57
CNOT7-204	ENST00000518885	HSP90B1	P14625	803 aa	Known RBP	31.09	■■■□□ 2.57
CNOT7-204	ENST00000518885	MYH16	Q9H6N6	1097 aa		31.09	■■■□□ 2.57
CNOT7-204	ENST00000518885	FER1L6	Q2WGJ9	1857 aa		31.09	■■■□□ 2.57
CNOT7-204	ENST00000518885	TRIM28	Q13263	835 aa	Known RBP	31.08	■■■□□ 2.57
CNOT7-204	ENST00000518885	ISCA1	Q9BUE6	129 aa		31.08	■■■□□ 2.57
CNOT7-204	ENST00000518885	FANCI	Q9NVI1	1328 aa		31.07	■■■□□ 2.56
CNOT7-204	ENST00000518885	FKBP4	Q02790	459 aa	Known RBP eCLIP	31.07	■■■□□ 2.56
CNOT7-204	ENST00000518885	DPY19L2	Q6NUT2	758 aa		31.07	■■■□□ 2.56
CNOT7-204	ENST00000518885	C16orf71	Q8IYS4	520 aa	Predicted RBP	31.07	■■■□□ 2.56
CNOT7-204	ENST00000518885	TSPYL6	Q8N831	410 aa		31.07	■■■□□ 2.56
CNOT7-204	ENST00000518885	PHAX	Q9H814	394 aa	Known RBP	31.07	■■■□□ 2.56
CNOT7-204	ENST00000518885	ATP5J2-PTCD1	G3V325	749 aa		31.04	■■■□□ 2.56
CNOT7-204	ENST00000518885	KIF3C	O14782	793 aa		31.04	■■■□□ 2.56
CNOT7-204	ENST00000518885	TIAM2	Q8IVF5	1701 aa		31.04	■■■□□ 2.56
CNOT7-204	ENST00000518885	GLTPD2	A6NH11	291 aa		31.03	■■■□□ 2.56
CNOT7-204	ENST00000518885	PPEF1	O14829	653 aa	Predicted RBP	31.03	■■■□□ 2.56
CNOT7-204	ENST00000518885	PRELP	P51888	382 aa		31.03	■■■□□ 2.56
CNOT7-204	ENST00000518885	DDX46	Q7L014	1031 aa	Known RBP	31.03	■■■□□ 2.56
CNOT7-204	ENST00000518885	HCLS1	P14317	486 aa	Predicted RBP	31.02	■■■□□ 2.56
CNOT7-204	ENST00000518885	NMRK2	Q9NPI5	230 aa		31.02	■■■□□ 2.56
CNOT7-204	ENST00000518885	TOMM70	O94826	608 aa		31.01	■■■□□ 2.55
CNOT7-204	ENST00000518885	CCDC191	Q8NCU4	936 aa		31.01	■■■□□ 2.55
CNOT7-204	ENST00000518885	PSMD1	Q99460	953 aa		31.01	■■■□□ 2.55
CNOT7-204	ENST00000518885	CCER2	I3L3R5	266 aa		31	■■■□□ 2.55
CNOT7-204	ENST00000518885	BBOX1	O75936	387 aa		31	■■■□□ 2.55
CNOT7-204	ENST00000518885	NEXN	Q0ZGT2	675 aa		31	■■■□□ 2.55
CNOT7-204	ENST00000518885	MYD88	Q99836	296 aa		31	■■■□□ 2.55
CNOT7-204	ENST00000518885	SLC4A2	P04920	1241 aa		30.99	■■■□□ 2.55
CNOT7-204	ENST00000518885	KSR2	Q6VAB6	950 aa		30.99	■■■□□ 2.55
CNOT7-204	ENST00000518885	C3orf67	Q6ZVT6	689 aa		30.99	■■■□□ 2.55
CNOT7-204	ENST00000518885	FAM89A	Q96GI7	184 aa		30.99	■■■□□ 2.55
CNOT7-204	ENST00000518885	METTL22	Q9BUU2	404 aa	Predicted RBP	30.99	■■■□□ 2.55
CNOT7-204	ENST00000518885	CCDC88A	Q3V6T2	1871 aa		30.98	■■■□□ 2.55
CNOT7-204	ENST00000518885	TMC4	Q7Z404	712 aa		30.98	■■■□□ 2.55
CNOT7-204	ENST00000518885	DICER1	Q9UPY3	1922 aa	Known RBP	30.98	■■■□□ 2.55
CNOT7-204	ENST00000518885	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	30.97	■■■□□ 2.55
CNOT7-204	ENST00000518885	RRAGC	Q9HB90	399 aa		30.97	■■■□□ 2.55
CNOT7-204	ENST00000518885	CWC25	Q9NXE8	425 aa	Predicted RBP	30.97	■■■□□ 2.55
CNOT7-204	ENST00000518885	MAP3K2	Q9Y2U5	619 aa		30.97	■■■□□ 2.55
CNOT7-204	ENST00000518885	ABCC4	O15439	1325 aa		30.97	■■■□□ 2.55
CNOT7-204	ENST00000518885	EXOSC9	Q06265	439 aa	Known RBP	30.96	■■■□□ 2.55
CNOT7-204	ENST00000518885	SYNE4	Q8N205	404 aa		30.96	■■■□□ 2.55
CNOT7-204	ENST00000518885	ZNF277	Q9NRM2	450 aa	Predicted RBP	30.96	■■■□□ 2.55
CNOT7-204	ENST00000518885	ATP6V0A2	Q9Y487	856 aa		30.96	■■■□□ 2.55
CNOT7-204	ENST00000518885	IRS4	O14654	1257 aa	Predicted RBP	30.95	■■■□□ 2.55
CNOT7-204	ENST00000518885	VEGFA	P15692	232 aa	Predicted RBP	30.95	■■■□□ 2.55
CNOT7-204	ENST00000518885	PI4KAP2	A4QPH2	592 aa		30.94	■■■□□ 2.54
CNOT7-204	ENST00000518885	IARS	P41252	1262 aa	Known RBP	30.94	■■■□□ 2.54
CNOT7-204	ENST00000518885	GRAP	Q13588	217 aa		30.94	■■■□□ 2.54
CNOT7-204	ENST00000518885	OLFM4	Q6UX06	510 aa		30.94	■■■□□ 2.54
CNOT7-204	ENST00000518885	PI4KAP1	Q8N8J0	262 aa		30.94	■■■□□ 2.54
CNOT7-204	ENST00000518885	GRAPL	Q8TC17	118 aa	Predicted RBP	30.94	■■■□□ 2.54
CNOT7-204	ENST00000518885	JDP2	Q8WYK2	163 aa		30.94	■■■□□ 2.54
CNOT7-204	ENST00000518885	VAMP4	O75379	141 aa		30.93	■■■□□ 2.54
CNOT7-204	ENST00000518885	SUPT20H	Q8NEM7	779 aa		30.93	■■■□□ 2.54
CNOT7-204	ENST00000518885	RBM46	Q8TBY0	533 aa	Known RBP	30.93	■■■□□ 2.54
CNOT7-204	ENST00000518885	TCERG1	O14776	1098 aa	Known RBP	30.92	■■■□□ 2.54
CNOT7-204	ENST00000518885	PCCA	P05165	728 aa	Predicted RBP	30.92	■■■□□ 2.54
CNOT7-204	ENST00000518885	SF3B3	Q15393	1217 aa	Known RBP	30.92	■■■□□ 2.54
CNOT7-204	ENST00000518885	FLII	Q13045	1269 aa		30.91	■■■□□ 2.54
CNOT7-204	ENST00000518885	RTL5	Q5HYW3	569 aa	Predicted RBP	30.91	■■■□□ 2.54
CNOT7-204	ENST00000518885	SP8	Q8IXZ3	490 aa		30.91	■■■□□ 2.54
CNOT7-204	ENST00000518885	VPS33B	Q9H267	617 aa		30.91	■■■□□ 2.54
CNOT7-204	ENST00000518885	LAMB2	P55268	1798 aa		30.91	■■■□□ 2.54
CNOT7-204	ENST00000518885	FKBP5	Q13451	457 aa	Predicted RBP	30.9	■■■□□ 2.54
CNOT7-204	ENST00000518885	ZNF428	Q96B54	188 aa		30.9	■■■□□ 2.54
CNOT7-204	ENST00000518885	SNED1	Q8TER0	1413 aa		30.9	■■■□□ 2.54
CNOT7-204	ENST00000518885	DDX60	Q8IY21	1712 aa	Known RBP	30.89	■■■□□ 2.54
CNOT7-204	ENST00000518885	FSTL1	Q12841	308 aa		30.88	■■■□□ 2.53

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms