RNA–Protein interactions for RNA: ENST00000518610.1

TMPRSS4-205, Transcript of transmembrane serine protease 4, human

TSL 3

Gene TMPRSS4, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPRSS4-205	ENST00000518610	PRDM10	Q9NQV6	1147 aa		10.86	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	FZD9	O00144	591 aa		10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	SNRPA1	P09661	255 aa	Known RBP	10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	HSPA8	P11142	646 aa	Known RBP	10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	IARS	P41252	1262 aa	Known RBP	10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	DEFB115	Q30KQ5	88 aa		10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	TPTE2	Q6XPS3	522 aa		10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	CCER1	Q8TC90	406 aa	Predicted RBP	10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	GJA3	Q9Y6H8	435 aa		10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	FER1L6	Q2WGJ9	1857 aa		10.85	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	CLSPN	Q9HAW4	1339 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	COL11A2	P13942	1736 aa	Predicted RBP	10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	TIAM2	Q8IVF5	1701 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	IQCA1L	A6NCM1	817 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	TRAF5	O00463	557 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	EPS15	P42566	896 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	SOGA3	Q5TF21	947 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	CLEC4G	Q6UXB4	293 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	TTLL7	Q6ZT98	887 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	C3orf67	Q6ZVT6	689 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	TSKS	Q9UJT2	592 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	CEMIP	Q8WUJ3	1361 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	DLEC1	Q9Y238	1755 aa		10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	WDR33	Q9C0J8	1336 aa	Known RBP	10.84	□□□□□ -0.67
TMPRSS4-205	ENST00000518610	COL3A1	P02461	1466 aa	Predicted RBP	10.83	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	GRM1	Q13255	1194 aa		10.83	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	CST9	Q5W186	159 aa		10.83	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	AIDA	Q96BJ3	306 aa		10.83	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	RRP7A	Q9Y3A4	280 aa	Known RBP	10.83	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	RASSF10	A6NK89	507 aa		10.82	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	GPT	P24298	496 aa		10.82	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	GTF2E1	P29083	439 aa	Predicted RBP	10.82	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	DLK2	Q6UY11	383 aa		10.82	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	RTKN2	Q8IZC4	609 aa		10.82	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	ABHD8	Q96I13	439 aa		10.82	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	ABT1	Q9ULW3	272 aa	Known RBP	10.82	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	UBR2	Q8IWV8	1755 aa		10.82	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	AOC2	O75106	756 aa		10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	ALDH1B1	P30837	517 aa		10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	SUSD4	Q5VX71	490 aa		10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	CYP4F22	Q6NT55	531 aa		10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	ZNF428	Q96B54	188 aa		10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	CACNA1S	Q13698	1873 aa		10.81	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	COL4A5	P29400	1685 aa		10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	SCNN1D	P51172	638 aa		10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	TAF7	Q15545	349 aa	Predicted RBP	10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	FAM161A	Q3B820	660 aa		10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	PNMA8A	Q86V59	439 aa	Predicted RBP	10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	GPC2	Q8N158	579 aa		10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	THUMPD2	Q9BTF0	503 aa	Known RBP	10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	ZNF652	Q9Y2D9	606 aa		10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	DICER1	Q9UPY3	1922 aa	Known RBP	10.8	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	ABCC12	Q96J65	1359 aa		10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	CCDC85C	A6NKD9	419 aa		10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	MYL6B	P14649	208 aa		10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	PPP2R1A	P30153	589 aa		10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	EIF6	P56537	245 aa	Known RBP	10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	JDP2	Q8WYK2	163 aa		10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	RTF1	Q92541	710 aa	Known RBP	10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	CAPNS2	Q96L46	248 aa		10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	GPR101	Q96P66	508 aa	Predicted RBP	10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	ZBTB3	Q9H5J0	574 aa		10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	VIRMA	Q69YN4	1812 aa	Known RBP	10.79	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	SHTN1	A0MZ66	631 aa		10.78	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	CRY2	Q49AN0	593 aa		10.78	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	LARGE2	Q8N3Y3	721 aa		10.78	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	ZIC5	Q96T25	663 aa		10.78	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	PSMD1	Q99460	953 aa		10.78	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	UBN2	Q6ZU65	1347 aa		10.78	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	SNED1	Q8TER0	1413 aa		10.77	□□□□□ -0.68
TMPRSS4-205	ENST00000518610	HOXA10	P31260	410 aa	Predicted RBP	10.77	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	PLCD3	Q8N3E9	789 aa		10.77	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	DCBLD2	Q96PD2	775 aa		10.77	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	SCN7A	Q01118	1682 aa		10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	SIPA1L3	O60292	1781 aa	Predicted RBP	10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	ANXA1	P04083	346 aa		10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	HIRA	P54198	1017 aa	Predicted RBP	10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	EIF4A1	P60842	406 aa	Known RBP	10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	MAP2K1	Q02750	393 aa	Predicted RBP	10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	CXCL9	Q07325	125 aa		10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	AOC3	Q16853	763 aa		10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	ZNF34	Q8IZ26	560 aa		10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	RASEF	Q8IZ41	740 aa		10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	RPGR	Q92834	1020 aa	Known RBP	10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	CFAP53	Q96M91	514 aa		10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	MAP3K15	Q6ZN16	1313 aa		10.76	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	ERVV-1	B6SEH8	477 aa		10.75	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	LMOD1	P29536	600 aa	Predicted RBP	10.75	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	RBM17	Q96I25	401 aa	Known RBP	10.75	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	NUDC	Q9Y266	331 aa		10.75	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	NPC1L1	Q9UHC9	1359 aa		10.75	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	LTBP1	Q14766	1721 aa		10.75	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	PPEF1	O14829	653 aa	Predicted RBP	10.74	□□□□□ -0.69
TMPRSS4-205	ENST00000518610	PPIP5K2	O43314	1243 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms