RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 MAP3K13O43283 966 aa9.81□□□□□ -0.84
CSGALNACT1-206ENST00000518542 HSP90AB3PQ58FF7 597 aa9.81□□□□□ -0.84
CSGALNACT1-206ENST00000518542 RIC3Q7Z5B4 369 aa9.81□□□□□ -0.84
CSGALNACT1-206ENST00000518542 PLBD2Q8NHP8 589 aa9.81□□□□□ -0.84
CSGALNACT1-206ENST00000518542 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
CSGALNACT1-206ENST00000518542 PHAXQ9H814 394 aaKnown RBP9.81□□□□□ -0.84
CSGALNACT1-206ENST00000518542 MMP10P09238 476 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 FLIIQ13045 1269 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 GIGYF2Q6Y7W6 1299 aaKnown RBP9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 BICDL1Q6ZP65 573 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 SSH1Q8WYL5 1049 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 BCL2L12Q9HB09 334 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 SMC4Q9NTJ3 1288 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 PCDHB13Q9Y5F0 798 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 PARP3Q9Y6F1 533 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 ANKRD36CQ5JPF3 1778 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 ARFGEF2Q9Y6D5 1785 aa9.8□□□□□ -0.84
CSGALNACT1-206ENST00000518542 NPHP1O15259 732 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 TM4SF1P30408 202 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 RARSP54136 660 aaKnown RBP9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 NFIXQ14938 502 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 HLFQ16534 295 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 TBC1D9BQ66K14 1250 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 KSR2Q6VAB6 950 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 G2E3Q7L622 706 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 PCDHB8Q9UN66 801 aa9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 NIP7Q9Y221 180 aaKnown RBP eCLIP9.79□□□□□ -0.84
CSGALNACT1-206ENST00000518542 CARMIL3Q8ND23 1372 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 PI4KAP2A4QPH2 592 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 NEXNQ0ZGT2 675 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 TCIRG1Q13488 830 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 PI4KAP1Q8N8J0 262 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 MAP3K2Q9Y2U5 619 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 ATP10DQ9P241 1426 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 PTPRCP08575 1304 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 KIF16BQ96L93 1317 aa9.78□□□□□ -0.84
CSGALNACT1-206ENST00000518542 AFDNP55196 1824 aaKnown RBP9.77□□□□□ -0.84
CSGALNACT1-206ENST00000518542 POLRMTO00411 1230 aaKnown RBP9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 SERPINB2P05120 415 aa9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 PARP10Q53GL7 1025 aa9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 PPP1R42Q7Z4L9 355 aa9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 NBPF5PQ86XG9 351 aaPredicted RBP9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 IFNL1Q8IU54 200 aa9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 ZNF34Q8IZ26 560 aa9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 METTL22Q9BUU2 404 aaPredicted RBP9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 NYXQ9GZU5 481 aa9.77□□□□□ -0.85
CSGALNACT1-206ENST00000518542 ADCY9O60503 1353 aa9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 IPO8O15397 1037 aaKnown RBP9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 GPTP24298 496 aa9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 GTF2E1P29083 439 aaPredicted RBP9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 DDR1Q08345 913 aa9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 GPR162Q16538 588 aa9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 TPTE2Q6XPS3 522 aa9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 NLGN2Q8NFZ4 835 aa9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 MYD88Q99836 296 aa9.76□□□□□ -0.85
CSGALNACT1-206ENST00000518542 FAM177BA6PVY3 158 aa9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 ATP5J2-PTCD1G3V325 749 aa9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 BCAR3O75815 825 aa9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 ST5P78524 1137 aa9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 TRIM28Q13263 835 aaKnown RBP9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 CNBD1Q8NA66 436 aa9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 ARHGAP45Q92619 1136 aa9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 UTP14AQ9BVJ6 771 aaKnown RBP9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 API5Q9BZZ5 524 aaKnown RBP9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 RCAN3Q9UKA8 241 aa9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 NOB1Q9ULX3 412 aaKnown RBP9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 NRXN2Q9P2S2 1712 aa9.75□□□□□ -0.85
CSGALNACT1-206ENST00000518542 F6X3S4 739 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 YBX3P16989 372 aaKnown RBP eCLIP9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 SUSD4Q5VX71 490 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 SLC4A10Q6U841 1118 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 NLRP10Q86W26 655 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 CCDC191Q8NCU4 936 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 FRAT1Q92837 279 aaPredicted RBP9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 ISCA1Q9BUE6 129 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 CWC25Q9NXE8 425 aaPredicted RBP9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 TRMT112Q9UI30 125 aaKnown RBP9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 TAOK2Q9UL54 1235 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 CD2APQ9Y5K6 639 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 RNF123Q5XPI4 1314 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 UBN2Q6ZU65 1347 aa9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 GOLGB1Q14789 3259 aaKnown RBP9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 IBTKQ9P2D0 1353 aaPredicted RBP9.74□□□□□ -0.85
CSGALNACT1-206ENST00000518542 KIF13BQ9NQT8 1826 aa9.73□□□□□ -0.85
CSGALNACT1-206ENST00000518542 CEP350Q5VT06 3117 aa9.73□□□□□ -0.85
CSGALNACT1-206ENST00000518542 HSP90B1P14625 803 aaKnown RBP9.73□□□□□ -0.85
CSGALNACT1-206ENST00000518542 ZKSCAN2Q63HK3 967 aa9.73□□□□□ -0.85
CSGALNACT1-206ENST00000518542 PRR5LQ6MZQ0 368 aa9.73□□□□□ -0.85
CSGALNACT1-206ENST00000518542 LINS1Q8NG48 757 aa9.73□□□□□ -0.85
CSGALNACT1-206ENST00000518542 SRCIN1Q9C0H9 1055 aa9.73□□□□□ -0.85
CSGALNACT1-206ENST00000518542 NEURL1BA8MQ27 555 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms