RNA–Protein interactions for RNA: ENST00000518426.1

CLVS1-202, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 312 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-202ENST00000518426 GNA15P30679 374 aa5.38□□□□□ -1.55
CLVS1-202ENST00000518426 SF3A1Q15459 793 aaKnown RBP5.38□□□□□ -1.55
CLVS1-202ENST00000518426 C4orf17Q53FE4 359 aa5.38□□□□□ -1.55
CLVS1-202ENST00000518426 C1orf53Q5VUE5 145 aa5.38□□□□□ -1.55
CLVS1-202ENST00000518426 NT5DC4Q86YG4 428 aa5.38□□□□□ -1.55
CLVS1-202ENST00000518426 RNF34Q969K3 372 aa5.38□□□□□ -1.55
CLVS1-202ENST00000518426 KLF16Q9BXK1 252 aaPredicted RBP5.38□□□□□ -1.55
CLVS1-202ENST00000518426 GGNBP2Q9H3C7 697 aa5.38□□□□□ -1.55
CLVS1-202ENST00000518426 FAM13BQ9NYF5 915 aa5.38□□□□□ -1.55
CLVS1-202ENST00000518426 BCS1LQ9Y276 419 aa5.38□□□□□ -1.55
CLVS1-202ENST00000518426 EIF1AYO14602 144 aaKnown RBP5.37□□□□□ -1.55
CLVS1-202ENST00000518426 MICAL2O94851 1124 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 ZNF76P36508 570 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 PHKA2P46019 1235 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 FANCCQ00597 558 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 RAD51AP2Q09MP3 1159 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 NBPF1Q3BBV0 1214 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 METTL16Q86W50 562 aaKnown RBP5.37□□□□□ -1.55
CLVS1-202ENST00000518426 FBF1Q8TES7 1133 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 PIK3R5Q8WYR1 880 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 HSH2DQ96JZ2 352 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 INSM2Q96T92 566 aaPredicted RBP5.37□□□□□ -1.55
CLVS1-202ENST00000518426 CFHR5Q9BXR6 569 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 GRIP2Q9C0E4 1043 aa5.37□□□□□ -1.55
CLVS1-202ENST00000518426 TGFBR3LH3BV60 316 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 OPLAHO14841 1288 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 NEFLP07196 543 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 GPC1P35052 558 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 HIF1AQ16665 826 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 MEIOBQ8N635 442 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 UBXN4Q92575 508 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 KIFC2Q96AC6 838 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 CCSER2Q9H7U1 834 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 POLMQ9NP87 494 aaPredicted RBP5.36□□□□□ -1.55
CLVS1-202ENST00000518426 METTL5Q9NRN9 209 aaKnown RBP5.36□□□□□ -1.55
CLVS1-202ENST00000518426 USP20Q9Y2K6 914 aa5.36□□□□□ -1.55
CLVS1-202ENST00000518426 CPNE3O75131 537 aaKnown RBP5.35□□□□□ -1.55
CLVS1-202ENST00000518426 RPLP1P05386 114 aaKnown RBP5.35□□□□□ -1.55
CLVS1-202ENST00000518426 IDH3AP50213 366 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 BICDL1Q6ZP65 573 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 ZNF280CQ8ND82 737 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 IRF7Q92985 503 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 KLRG1Q96E93 195 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 SUSD3Q96L08 255 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 TGIF2Q9GZN2 237 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 DNAJC25Q9H1X3 360 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 NXF1Q9UBU9 619 aaKnown RBP5.35□□□□□ -1.55
CLVS1-202ENST00000518426 FOXD3Q9UJU5 478 aaPredicted RBP5.35□□□□□ -1.55
CLVS1-202ENST00000518426 SPG7Q9UQ90 795 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 AK5Q9Y6K8 562 aa5.35□□□□□ -1.55
CLVS1-202ENST00000518426 CTSHP09668 335 aa5.34□□□□□ -1.55
CLVS1-202ENST00000518426 TATP17735 454 aaPredicted RBP5.34□□□□□ -1.55
CLVS1-202ENST00000518426 EIF4BP23588 611 aaKnown RBP5.34□□□□□ -1.55
CLVS1-202ENST00000518426 RNF144AP50876 292 aaPredicted RBP5.34□□□□□ -1.55
CLVS1-202ENST00000518426 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.34□□□□□ -1.55
CLVS1-202ENST00000518426 CMTR1Q8N1G2 835 aaKnown RBP5.34□□□□□ -1.55
CLVS1-202ENST00000518426 CRELD1Q96HD1 420 aa5.34□□□□□ -1.55
CLVS1-202ENST00000518426 TSEN34Q9BSV6 310 aaKnown RBP5.34□□□□□ -1.55
CLVS1-202ENST00000518426 ACBD3Q9H3P7 528 aa5.34□□□□□ -1.55
CLVS1-202ENST00000518426 CAPN10Q9HC96 672 aa5.34□□□□□ -1.55
CLVS1-202ENST00000518426 ZDHHC3Q9NYG2 299 aa5.34□□□□□ -1.55
CLVS1-202ENST00000518426 SMPD1P17405 629 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 CTSOP43234 321 aaPredicted RBP5.33□□□□□ -1.56
CLVS1-202ENST00000518426 ARSDP51689 593 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 POU4F2Q12837 409 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 USPL1Q5W0Q7 1092 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 PI16Q6UXB8 463 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 PRICKLE2Q7Z3G6 844 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 ZNF438Q7Z4V0 828 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 C7orf43Q8WVR3 580 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 FRMD6Q96NE9 622 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 TINF2Q9BSI4 451 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 TANGO6Q9C0B7 1094 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 NEUROD4Q9HD90 331 aa5.33□□□□□ -1.56
CLVS1-202ENST00000518426 SPATA31C2B4DYI2 1134 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 UBAP1LF5GYI3 381 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 SPINT1O43278 529 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 TNFRSF21O75509 655 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 UPP2O95045 317 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 IRS1P35568 1242 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 TNNI2P48788 182 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 TRIP4Q15650 581 aaPredicted RBP5.32□□□□□ -1.56
CLVS1-202ENST00000518426 IER5Q5VY09 327 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 LINC00528Q8N1L1 170 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 EPS8L3Q8TE67 593 aaKnown RBP5.32□□□□□ -1.56
CLVS1-202ENST00000518426 SNX29Q8TEQ0 813 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 HPS1Q92902 700 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 CCDC74AQ96AQ1 378 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 NLRP2Q9NX02 1062 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 ANKIB1Q9P2G1 1089 aa5.32□□□□□ -1.56
CLVS1-202ENST00000518426 DMGDHQ9UI17 866 aaKnown RBP5.32□□□□□ -1.56
CLVS1-202ENST00000518426 FNDC3AQ9Y2H6 1198 aaKnown RBP5.32□□□□□ -1.56
CLVS1-202ENST00000518426 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.32□□□□□ -1.56
CLVS1-202ENST00000518426 RTCBQ9Y3I0 505 aaKnown RBP5.32□□□□□ -1.56
CLVS1-202ENST00000518426 PHACTR2O75167 634 aa5.31□□□□□ -1.56
CLVS1-202ENST00000518426 ATP4AP20648 1035 aa5.31□□□□□ -1.56
CLVS1-202ENST00000518426 KCNMA1Q12791 1236 aa5.31□□□□□ -1.56
CLVS1-202ENST00000518426 ZNF394Q53GI3 561 aa5.31□□□□□ -1.56
CLVS1-202ENST00000518426 ARSJQ5FYB0 599 aaPredicted RBP5.31□□□□□ -1.56
CLVS1-202ENST00000518426 C6orf118Q5T5N4 469 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms