RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 FBXO46Q6PJ61 603 aaPredicted RBP7.23□□□□□ -1.25
CDH12P3-201ENST00000517935 USP50Q70EL3 339 aaPredicted RBP7.23□□□□□ -1.25
CDH12P3-201ENST00000517935 DCAF11Q8TEB1 546 aa7.23□□□□□ -1.25
CDH12P3-201ENST00000517935 RNF123Q5XPI4 1314 aa7.23□□□□□ -1.25
CDH12P3-201ENST00000517935 NRXN2Q9P2S2 1712 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 TRAF5O00463 557 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 FMR1Q06787 632 aaKnown RBP eCLIP7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 NBPF6Q5VWK0 638 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 VSIG10Q8N0Z9 540 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 ZNF710Q8N1W2 664 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 CCDC102AQ96A19 550 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 NBPF4Q96M43 638 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 ATG3Q9NT62 314 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 KDM2AQ9Y2K7 1162 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 EVC2Q86UK5 1308 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 ZNF541Q9H0D2 1346 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 LAMA3Q16787 3333 aa7.22□□□□□ -1.25
CDH12P3-201ENST00000517935 FZD9O00144 591 aa7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 CELF2O95319 508 aaKnown RBP7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 LMOD1P29536 600 aaPredicted RBP7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 HOXC9P31274 260 aa7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 PDE6BP35913 854 aa7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 NOM1Q5C9Z4 860 aaKnown RBP7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 BICDL1Q6ZP65 573 aa7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 ZIC5Q96T25 663 aa7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 SRP68Q9UHB9 627 aaKnown RBP7.21□□□□□ -1.26
CDH12P3-201ENST00000517935 ZPR1O75312 459 aa7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 HOXB3P14651 431 aaPredicted RBP7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 PLA2G5P39877 138 aa7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 NME9Q86XW9 330 aa7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 CNKSR1Q969H4 720 aa7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 FAM163AQ96GL9 167 aaPredicted RBP7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 SLC4A9Q96Q91 983 aa7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 BRIP1Q9BX63 1249 aa7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 HDAC9Q9UKV0 1011 aa7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 COL5A3P25940 1745 aaPredicted RBP7.2□□□□□ -1.26
CDH12P3-201ENST00000517935 FAM155AB1AL88 458 aaPredicted RBP7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 H0YGN5 161 aa7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 SERPINB2P05120 415 aa7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 NFIXQ14938 502 aa7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 GPR153Q6NV75 609 aa7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 ZNF622Q969S3 477 aaKnown RBP eCLIP7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 PGAP2Q9UHJ9 254 aa7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 SBNO2Q9Y2G9 1366 aa7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 MUC3AQ02505 3323 aa7.19□□□□□ -1.26
CDH12P3-201ENST00000517935 A0A1W2PPC1 479 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 TBC1D12O60347 775 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 COL9A1P20849 921 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 CRKLP46109 303 aaKnown RBP7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 AMPHP49418 695 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 KIF23Q02241 960 aaPredicted RBP7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 E2F4Q16254 413 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 STYK1Q6J9G0 422 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 RGMBQ6NW40 437 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 RBM27Q9P2N5 1060 aaKnown RBP7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 SPG7Q9UQ90 795 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 STXBP5LQ9Y2K9 1186 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 RTL1A6NKG5 1358 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 MON2Q7Z3U7 1717 aa7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 RBBP6Q7Z6E9 1792 aaKnown RBP7.18□□□□□ -1.26
CDH12P3-201ENST00000517935 HUNKP57058 714 aa7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 FKBP4Q02790 459 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 USPL1Q5W0Q7 1092 aa7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 PRPF40BQ6NWY9 871 aaKnown RBP7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 ZC3H15Q8WU90 426 aaKnown RBP7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 ZNF296Q8WUU4 475 aaPredicted RBP7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 FAM122AQ96E09 287 aa7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 ZSWIM6Q9HCJ5 1215 aa7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 ERBB4Q15303 1308 aa7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 AFDNP55196 1824 aaKnown RBP7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 TTC28Q96AY4 2481 aa7.17□□□□□ -1.26
CDH12P3-201ENST00000517935 RGPD2P0DJD1 1756 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 SLC24A1O60721 1099 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 EPS15P42566 896 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 SCNN1DP51172 638 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 CCDC93Q567U6 631 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 RTKN2Q8IZC4 609 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 SYNE4Q8N205 404 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 USHBP1Q8N6Y0 703 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 C7orf43Q8WVR3 580 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 JDP2Q8WYK2 163 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 CSRNP1Q96S65 589 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 NARFQ9UHQ1 456 aa7.16□□□□□ -1.26
CDH12P3-201ENST00000517935 AKAP11Q9UKA4 1901 aa7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 ERVV-2B6SEH9 535 aa7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 ST18O60284 1047 aa7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 EIF6P56537 245 aaKnown RBP7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 CAMK2BQ13554 666 aa7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 CDC37L1Q7L3B6 337 aa7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 PTCD2Q8WV60 388 aaKnown RBP7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 PRO3102Q9H379 93 aa7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 ZNF277Q9NRM2 450 aaPredicted RBP7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 ADARB2Q9NS39 739 aaKnown RBP7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 PCDHGA4Q9Y5G9 962 aa7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 CARMIL3Q8ND23 1372 aa7.15□□□□□ -1.26
CDH12P3-201ENST00000517935 EDC4Q6P2E9 1401 aaKnown RBP7.15□□□□□ -1.27
CDH12P3-201ENST00000517935 MYH14Q7Z406 1995 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms