RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-203ENST00000517921 CWC25Q9NXE8 425 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-203ENST00000517921 C9orf78Q9NZ63 289 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-203ENST00000517921 PPP1R1BQ9UD71 204 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-203ENST00000517921 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
PABPC1-203ENST00000517921 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
PABPC1-203ENST00000517921 CASP7P55210 303 aa13.25□□□□□ -0.29
PABPC1-203ENST00000517921 CCDC191Q8NCU4 936 aa13.25□□□□□ -0.29
PABPC1-203ENST00000517921 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
PABPC1-203ENST00000517921 RWDD1Q9H446 243 aaPredicted RBP13.25□□□□□ -0.29
PABPC1-203ENST00000517921 UBN2Q6ZU65 1347 aa13.24□□□□□ -0.29
PABPC1-203ENST00000517921 RGL2O15211 777 aa13.24□□□□□ -0.29
PABPC1-203ENST00000517921 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
PABPC1-203ENST00000517921 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
PABPC1-203ENST00000517921 RPAP2Q8IXW5 612 aaPredicted RBP13.24□□□□□ -0.29
PABPC1-203ENST00000517921 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
PABPC1-203ENST00000517921 H7C1W4 665 aa13.23□□□□□ -0.29
PABPC1-203ENST00000517921 GPTP24298 496 aa13.23□□□□□ -0.29
PABPC1-203ENST00000517921 UBE3BQ7Z3V4 1068 aa13.23□□□□□ -0.29
PABPC1-203ENST00000517921 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
PABPC1-203ENST00000517921 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
PABPC1-203ENST00000517921 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
PABPC1-203ENST00000517921 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
PABPC1-203ENST00000517921 PHF14O94880 888 aa13.22□□□□□ -0.29
PABPC1-203ENST00000517921 ZNF827Q17R98 1081 aa13.22□□□□□ -0.29
PABPC1-203ENST00000517921 SMC5Q8IY18 1101 aa13.22□□□□□ -0.29
PABPC1-203ENST00000517921 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-203ENST00000517921 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
PABPC1-203ENST00000517921 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
PABPC1-203ENST00000517921 SRP68Q9UHB9 627 aaKnown RBP13.22□□□□□ -0.29
PABPC1-203ENST00000517921 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
PABPC1-203ENST00000517921 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
PABPC1-203ENST00000517921 TAF1P21675 1872 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 PNMA6EA0A0J9YXQ4 647 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 ZBTB7AO95365 584 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.29
PABPC1-203ENST00000517921 SSFA2P28290 1259 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 ATP8B2P98198 1209 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 MTX1Q13505 466 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 CLEC4GQ6UXB4 293 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 BICC1Q9H694 974 aaKnown RBP13.21□□□□□ -0.29
PABPC1-203ENST00000517921 A0A1B0GUL6 1792 aa13.21□□□□□ -0.29
PABPC1-203ENST00000517921 NRXN2Q9P2S2 1712 aa13.21□□□□□ -0.3
PABPC1-203ENST00000517921 CDHR2Q9BYE9 1310 aa13.2□□□□□ -0.3
PABPC1-203ENST00000517921 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
PABPC1-203ENST00000517921 HMMRO75330 724 aa13.2□□□□□ -0.3
PABPC1-203ENST00000517921 POLA2Q14181 598 aa13.2□□□□□ -0.3
PABPC1-203ENST00000517921 EPHA10Q5JZY3 1008 aa13.2□□□□□ -0.3
PABPC1-203ENST00000517921 TRAPPC3LQ5T215 181 aa13.2□□□□□ -0.3
PABPC1-203ENST00000517921 ZBTB38Q8NAP3 1195 aaPredicted RBP13.2□□□□□ -0.3
PABPC1-203ENST00000517921 SSH3Q8TE77 659 aa13.2□□□□□ -0.3
PABPC1-203ENST00000517921 TNRC6CQ9HCJ0 1690 aaKnown RBP13.2□□□□□ -0.3
PABPC1-203ENST00000517921 ZPR1O75312 459 aa13.19□□□□□ -0.3
PABPC1-203ENST00000517921 RFC4P35249 363 aa13.19□□□□□ -0.3
PABPC1-203ENST00000517921 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-203ENST00000517921 PARP10Q53GL7 1025 aa13.19□□□□□ -0.3
PABPC1-203ENST00000517921 PPP1R42Q7Z4L9 355 aa13.19□□□□□ -0.3
PABPC1-203ENST00000517921 GCC1Q96CN9 775 aa13.19□□□□□ -0.3
PABPC1-203ENST00000517921 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-203ENST00000517921 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
PABPC1-203ENST00000517921 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
PABPC1-203ENST00000517921 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-203ENST00000517921 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
PABPC1-203ENST00000517921 AK9Q5TCS8 1911 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 SRGAP3O43295 1099 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 NTSR2O95665 410 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 FOXO4P98177 505 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
PABPC1-203ENST00000517921 SUSD4Q5VX71 490 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 PDZRN3Q9UPQ7 1066 aa13.18□□□□□ -0.3
PABPC1-203ENST00000517921 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
PABPC1-203ENST00000517921 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
PABPC1-203ENST00000517921 TRMT112Q9UI30 125 aaKnown RBP13.17□□□□□ -0.3
PABPC1-203ENST00000517921 NUCB1Q02818 461 aa13.16□□□□□ -0.3
PABPC1-203ENST00000517921 UTP14AQ9BVJ6 771 aaKnown RBP13.16□□□□□ -0.3
PABPC1-203ENST00000517921 MTFR1LQ9H019 292 aa13.16□□□□□ -0.3
PABPC1-203ENST00000517921 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
PABPC1-203ENST00000517921 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
PABPC1-203ENST00000517921 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
PABPC1-203ENST00000517921 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-203ENST00000517921 GYS1P13807 737 aa13.15□□□□□ -0.3
PABPC1-203ENST00000517921 EXOC6BQ9Y2D4 811 aa13.15□□□□□ -0.3
PABPC1-203ENST00000517921 CARMIL3Q8ND23 1372 aa13.15□□□□□ -0.3
PABPC1-203ENST00000517921 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
PABPC1-203ENST00000517921 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
PABPC1-203ENST00000517921 CACNA1SQ13698 1873 aa13.14□□□□□ -0.31
PABPC1-203ENST00000517921 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-203ENST00000517921 LMBR1LQ6UX01 489 aa13.14□□□□□ -0.31
PABPC1-203ENST00000517921 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
PABPC1-203ENST00000517921 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-203ENST00000517921 COL4A1P02462 1669 aa13.14□□□□□ -0.31
PABPC1-203ENST00000517921 CTSWP56202 376 aa13.13□□□□□ -0.31
PABPC1-203ENST00000517921 NFIXQ14938 502 aa13.13□□□□□ -0.31
PABPC1-203ENST00000517921 CHD1LQ86WJ1 897 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms