RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TRPM2O94759 1503 aa5.53□□□□□ -1.52
CPNE3-204ENST00000517862 FYCO1Q9BQS8 1478 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 COL24A1Q17RW2 1714 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 CDC14CA4D256 554 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 RCCD1A6NED2 376 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 TIMP2P16035 220 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 UBTFP17480 764 aaKnown RBP5.52□□□□□ -1.53
CPNE3-204ENST00000517862 NNTQ13423 1086 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 BRICD5Q6PL45 260 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 SV2AQ7L0J3 742 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 BEGAINQ9BUH8 593 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 BTG4Q9NY30 223 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 AMOTL2Q9Y2J4 779 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 SLC27A5Q9Y2P5 690 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 ARIH1Q9Y4X5 557 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-204ENST00000517862 TNRC6CQ9HCJ0 1690 aaKnown RBP5.52□□□□□ -1.53
CPNE3-204ENST00000517862 KCPQ6ZWJ8 1503 aa5.52□□□□□ -1.53
CPNE3-204ENST00000517862 NPHP3Q7Z494 1330 aa5.51□□□□□ -1.53
CPNE3-204ENST00000517862 ATP6V1AP38606 617 aa5.51□□□□□ -1.53
CPNE3-204ENST00000517862 MMP16P51512 607 aa5.51□□□□□ -1.53
CPNE3-204ENST00000517862 TXNRD1Q16881 649 aa5.51□□□□□ -1.53
CPNE3-204ENST00000517862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.51□□□□□ -1.53
CPNE3-204ENST00000517862 NPDC1Q9NQX5 325 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-204ENST00000517862 DNMT3LQ9UJW3 386 aa5.51□□□□□ -1.53
CPNE3-204ENST00000517862 PIEZO1Q92508 2521 aa5.51□□□□□ -1.53
CPNE3-204ENST00000517862 DHX29Q7Z478 1369 aaKnown RBP5.51□□□□□ -1.53
CPNE3-204ENST00000517862 ADGRL2O95490 1459 aa5.51□□□□□ -1.53
CPNE3-204ENST00000517862 TRIM66O15016 1216 aa5.5□□□□□ -1.53
CPNE3-204ENST00000517862 PAX4O43316 350 aa5.5□□□□□ -1.53
CPNE3-204ENST00000517862 BMP2P12643 396 aa5.5□□□□□ -1.53
CPNE3-204ENST00000517862 PTSQ03393 145 aa5.5□□□□□ -1.53
CPNE3-204ENST00000517862 PDE4DQ08499 809 aa5.5□□□□□ -1.53
CPNE3-204ENST00000517862 VWA5B2Q8N398 1253 aa5.5□□□□□ -1.53
CPNE3-204ENST00000517862 PLEKHG1Q9ULL1 1385 aa5.5□□□□□ -1.53
CPNE3-204ENST00000517862 PXDNQ92626 1479 aa5.5□□□□□ -1.53
CPNE3-204ENST00000517862 SBF2Q86WG5 1849 aa5.49□□□□□ -1.53
CPNE3-204ENST00000517862 PLEKHG3A1L390 1219 aa5.49□□□□□ -1.53
CPNE3-204ENST00000517862 CABLES1Q8TDN4 633 aa5.49□□□□□ -1.53
CPNE3-204ENST00000517862 ARID3AQ99856 593 aa5.49□□□□□ -1.53
CPNE3-204ENST00000517862 VCANP13611 3396 aa5.49□□□□□ -1.53
CPNE3-204ENST00000517862 PIK3R4Q99570 1358 aa5.48□□□□□ -1.53
CPNE3-204ENST00000517862 PLEKHG2Q9H7P9 1386 aa5.48□□□□□ -1.53
CPNE3-204ENST00000517862 GPR37O15354 613 aa5.48□□□□□ -1.53
CPNE3-204ENST00000517862 OSBPP22059 807 aa5.48□□□□□ -1.53
CPNE3-204ENST00000517862 CCDC155Q8N6L0 562 aa5.48□□□□□ -1.53
CPNE3-204ENST00000517862 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
CPNE3-204ENST00000517862 CDK11AQ9UQ88 783 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-204ENST00000517862 CD2APQ9Y5K6 639 aa5.48□□□□□ -1.53
CPNE3-204ENST00000517862 FOXO3O43524 673 aa5.47□□□□□ -1.53
CPNE3-204ENST00000517862 FUT2Q10981 343 aa5.47□□□□□ -1.53
CPNE3-204ENST00000517862 PTF1AQ7RTS3 328 aa5.47□□□□□ -1.53
CPNE3-204ENST00000517862 SH3RF1Q7Z6J0 888 aa5.47□□□□□ -1.53
CPNE3-204ENST00000517862 FAM117AQ9C073 453 aa5.47□□□□□ -1.53
CPNE3-204ENST00000517862 ZMYND15Q9H091 742 aa5.47□□□□□ -1.53
CPNE3-204ENST00000517862 CLIP1P30622 1438 aa5.47□□□□□ -1.53
CPNE3-204ENST00000517862 LAMB4A4D0S4 1761 aa5.47□□□□□ -1.53
CPNE3-204ENST00000517862 RNF19BQ6ZMZ0 732 aa5.46□□□□□ -1.54
CPNE3-204ENST00000517862 PODXL2Q9NZ53 605 aa5.46□□□□□ -1.54
CPNE3-204ENST00000517862 SPATA31A1Q5TZJ5 1347 aa5.46□□□□□ -1.54
CPNE3-204ENST00000517862 IGSF1Q8N6C5 1336 aa5.46□□□□□ -1.54
CPNE3-204ENST00000517862 SYNGAP1Q96PV0 1343 aa5.46□□□□□ -1.54
CPNE3-204ENST00000517862 PKD1L3Q7Z443 1732 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 LMTK2Q8IWU2 1503 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 CEP290O15078 2479 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.45□□□□□ -1.54
CPNE3-204ENST00000517862 FOXD4L6Q3SYB3 417 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-204ENST00000517862 C9orf131Q5VYM1 1079 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 FOXD4L3Q6VB84 417 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-204ENST00000517862 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.45□□□□□ -1.54
CPNE3-204ENST00000517862 RSPH6AQ9H0K4 717 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 C1orf115Q9H7X2 142 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 TLL2Q9Y6L7 1015 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 PTPRUQ92729 1446 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 SPATA31A3Q5VYP0 1347 aa5.45□□□□□ -1.54
CPNE3-204ENST00000517862 KIF15Q9NS87 1388 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 CHD8Q9HCK8 2581 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 TMEM265A0A087WTH1 108 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 DXOO77932 396 aaKnown RBP5.44□□□□□ -1.54
CPNE3-204ENST00000517862 CEP152O94986 1710 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 BCRP11274 1271 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 VEGFAP15692 232 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-204ENST00000517862 ITGA6P23229 1130 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 TROQ12816 1431 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-204ENST00000517862 IDI1Q13907 227 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 ESCO1Q5FWF5 840 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 CDC42BPAQ5VT25 1732 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 MCTP1Q6DN14 999 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 ARHGAP27Q6ZUM4 889 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 LINC00528Q8N1L1 170 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 CCDC102AQ96A19 550 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 RRBP1Q9P2E9 1410 aaKnown RBP5.44□□□□□ -1.54
CPNE3-204ENST00000517862 USP35Q9P2H5 1018 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 ADGRG1Q9Y653 693 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 PLEKHH2Q8IVE3 1493 aa5.44□□□□□ -1.54
CPNE3-204ENST00000517862 WDR33Q9C0J8 1336 aaKnown RBP5.44□□□□□ -1.54
CPNE3-204ENST00000517862 TTC28Q96AY4 2481 aa5.43□□□□□ -1.54
CPNE3-204ENST00000517862 LRRIQ1Q96JM4 1722 aa5.43□□□□□ -1.54
CPNE3-204ENST00000517862 ADAMTS13Q76LX8 1427 aa5.43□□□□□ -1.54
CPNE3-204ENST00000517862 MKI67P46013 3256 aaKnown RBP5.43□□□□□ -1.54
CPNE3-204ENST00000517862 COL14A1Q05707 1796 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms