RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
CLN8-202ENST00000517514 CARMIL3Q8ND23 1372 aa12.56□□□□□ -0.4
CLN8-202ENST00000517514 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
CLN8-202ENST00000517514 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
CLN8-202ENST00000517514 HSP90AB3PQ58FF7 597 aa12.56□□□□□ -0.4
CLN8-202ENST00000517514 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
CLN8-202ENST00000517514 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
CLN8-202ENST00000517514 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
CLN8-202ENST00000517514 SERPINB2P05120 415 aa12.55□□□□□ -0.4
CLN8-202ENST00000517514 GCKRQ14397 625 aa12.55□□□□□ -0.4
CLN8-202ENST00000517514 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
CLN8-202ENST00000517514 JARID2Q92833 1246 aaPredicted RBP12.55□□□□□ -0.4
CLN8-202ENST00000517514 SETDB2Q96T68 719 aa12.55□□□□□ -0.4
CLN8-202ENST00000517514 MYH3P11055 1940 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
CLN8-202ENST00000517514 FAM177BA6PVY3 158 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 H7C1W4 665 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 ALDH1L1O75891 902 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 PARP10Q53GL7 1025 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 SRCIN1Q9C0H9 1055 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
CLN8-202ENST00000517514 UTYO14607 1347 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 COL4A1P02462 1669 aa12.54□□□□□ -0.4
CLN8-202ENST00000517514 LRP5O75197 1615 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
CLN8-202ENST00000517514 NEXNQ0ZGT2 675 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 PDE3AQ14432 1141 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 FAM89AQ96GI7 184 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 KAZALD1Q96I82 304 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 TAF1P21675 1872 aa12.53□□□□□ -0.4
CLN8-202ENST00000517514 PCCAP05165 728 aaPredicted RBP12.52□□□□□ -0.41
CLN8-202ENST00000517514 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.41
CLN8-202ENST00000517514 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.41
CLN8-202ENST00000517514 MEIS3Q99687 375 aa12.52□□□□□ -0.41
CLN8-202ENST00000517514 UTP14AQ9BVJ6 771 aaKnown RBP12.52□□□□□ -0.41
CLN8-202ENST00000517514 COG6Q9Y2V7 657 aa12.52□□□□□ -0.41
CLN8-202ENST00000517514 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
CLN8-202ENST00000517514 GRM8O00222 908 aa12.51□□□□□ -0.41
CLN8-202ENST00000517514 ZBTB7BO15156 539 aaPredicted RBP12.51□□□□□ -0.41
CLN8-202ENST00000517514 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
CLN8-202ENST00000517514 EPHA10Q5JZY3 1008 aa12.51□□□□□ -0.41
CLN8-202ENST00000517514 SLC10A5Q5PT55 438 aa12.51□□□□□ -0.41
CLN8-202ENST00000517514 NBPF5PQ86XG9 351 aaPredicted RBP12.51□□□□□ -0.41
CLN8-202ENST00000517514 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.51□□□□□ -0.41
CLN8-202ENST00000517514 ZBTB38Q8NAP3 1195 aaPredicted RBP12.51□□□□□ -0.41
CLN8-202ENST00000517514 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
CLN8-202ENST00000517514 TRMT112Q9UI30 125 aaKnown RBP12.51□□□□□ -0.41
CLN8-202ENST00000517514 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
CLN8-202ENST00000517514 RIC1Q4ADV7 1423 aa12.51□□□□□ -0.41
CLN8-202ENST00000517514 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
CLN8-202ENST00000517514 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
CLN8-202ENST00000517514 MVPQ14764 893 aaKnown RBP12.5□□□□□ -0.41
CLN8-202ENST00000517514 UBE3BQ7Z3V4 1068 aa12.5□□□□□ -0.41
CLN8-202ENST00000517514 PPP1R42Q7Z4L9 355 aa12.5□□□□□ -0.41
CLN8-202ENST00000517514 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
CLN8-202ENST00000517514 CDHR2Q9BYE9 1310 aa12.5□□□□□ -0.41
CLN8-202ENST00000517514 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
CLN8-202ENST00000517514 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
CLN8-202ENST00000517514 FOXO4P98177 505 aa12.49□□□□□ -0.41
CLN8-202ENST00000517514 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
CLN8-202ENST00000517514 FTSJ3Q8IY81 847 aaKnown RBP12.49□□□□□ -0.41
CLN8-202ENST00000517514 CNBD1Q8NA66 436 aa12.49□□□□□ -0.41
CLN8-202ENST00000517514 CRBNQ96SW2 442 aa12.49□□□□□ -0.41
CLN8-202ENST00000517514 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
CLN8-202ENST00000517514 KLRG2A4D1S0 409 aaPredicted RBP12.48□□□□□ -0.41
CLN8-202ENST00000517514 IRS4O14654 1257 aaPredicted RBP12.48□□□□□ -0.41
CLN8-202ENST00000517514 MS4A1P11836 297 aa12.48□□□□□ -0.41
CLN8-202ENST00000517514 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
CLN8-202ENST00000517514 ITPRIPQ8IWB1 547 aa12.48□□□□□ -0.41
CLN8-202ENST00000517514 ANKRD44Q8N8A2 993 aa12.48□□□□□ -0.41
CLN8-202ENST00000517514 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
CLN8-202ENST00000517514 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
CLN8-202ENST00000517514 SPEF2Q9C093 1822 aa12.47□□□□□ -0.41
CLN8-202ENST00000517514 POLD1P28340 1107 aa12.47□□□□□ -0.41
CLN8-202ENST00000517514 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
CLN8-202ENST00000517514 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
CLN8-202ENST00000517514 C9orf78Q9NZ63 289 aaPredicted RBP12.47□□□□□ -0.41
CLN8-202ENST00000517514 KCNA3P22001 575 aa12.46□□□□□ -0.41
CLN8-202ENST00000517514 CRY2Q49AN0 593 aa12.46□□□□□ -0.41
CLN8-202ENST00000517514 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.41
CLN8-202ENST00000517514 LRRFIP2Q9Y608 721 aaKnown RBP12.46□□□□□ -0.41
CLN8-202ENST00000517514 PDE8AO60658 829 aa12.45□□□□□ -0.42
CLN8-202ENST00000517514 CSF1RP07333 972 aa12.45□□□□□ -0.42
CLN8-202ENST00000517514 ST5P78524 1137 aa12.45□□□□□ -0.42
CLN8-202ENST00000517514 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
CLN8-202ENST00000517514 RABL6Q3YEC7 729 aaPredicted RBP12.45□□□□□ -0.42
CLN8-202ENST00000517514 TTLL11Q8NHH1 800 aa12.45□□□□□ -0.42
CLN8-202ENST00000517514 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
CLN8-202ENST00000517514 C1orf115Q9H7X2 142 aa12.45□□□□□ -0.42
CLN8-202ENST00000517514 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
CLN8-202ENST00000517514 SLX4Q8IY92 1834 aa12.45□□□□□ -0.42
CLN8-202ENST00000517514 A0A1B0GUL6 1792 aa12.45□□□□□ -0.42
CLN8-202ENST00000517514 GOLGB1Q14789 3259 aaKnown RBP12.45□□□□□ -0.42
CLN8-202ENST00000517514 GNAI3P08754 354 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms