RNA–Protein interactions for RNA: ENST00000517500.5

SORBS3-202, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-202ENST00000517500 LMNB1P20700 586 aa27.41■■□□□ 1.98
SORBS3-202ENST00000517500 PHAXQ9H814 394 aaKnown RBP27.41■■□□□ 1.98
SORBS3-202ENST00000517500 SALL2Q9Y467 1007 aaPredicted RBP27.41■■□□□ 1.98
SORBS3-202ENST00000517500 LTBP3Q9NS15 1303 aa27.41■■□□□ 1.98
SORBS3-202ENST00000517500 ABCC12Q96J65 1359 aa27.4■■□□□ 1.98
SORBS3-202ENST00000517500 NLRP3Q96P20 1036 aa27.4■■□□□ 1.98
SORBS3-202ENST00000517500 NFKBIEO00221 500 aa27.39■■□□□ 1.98
SORBS3-202ENST00000517500 GOLGA2Q08379 1002 aa27.39■■□□□ 1.98
SORBS3-202ENST00000517500 CRAMP1Q96RY5 1269 aa27.39■■□□□ 1.98
SORBS3-202ENST00000517500 SLX4Q8IY92 1834 aa27.39■■□□□ 1.97
SORBS3-202ENST00000517500 ZNF521Q96K83 1311 aa27.39■■□□□ 1.97
SORBS3-202ENST00000517500 FANCIQ9NVI1 1328 aa27.39■■□□□ 1.97
SORBS3-202ENST00000517500 ZC3H4Q9UPT8 1303 aaKnown RBP27.39■■□□□ 1.97
SORBS3-202ENST00000517500 SBF1O95248 1867 aa27.38■■□□□ 1.97
SORBS3-202ENST00000517500 GPBP1L1Q9HC44 474 aaPredicted RBP27.38■■□□□ 1.97
SORBS3-202ENST00000517500 VAMP4O75379 141 aa27.37■■□□□ 1.97
SORBS3-202ENST00000517500 RIC3Q7Z5B4 369 aa27.37■■□□□ 1.97
SORBS3-202ENST00000517500 STK31Q9BXU1 1019 aa27.37■■□□□ 1.97
SORBS3-202ENST00000517500 MYH16Q9H6N6 1097 aa27.37■■□□□ 1.97
SORBS3-202ENST00000517500 RNF181Q9P0P0 153 aa27.37■■□□□ 1.97
SORBS3-202ENST00000517500 TRMT112Q9UI30 125 aaKnown RBP27.37■■□□□ 1.97
SORBS3-202ENST00000517500 DDX58O95786 925 aaKnown RBP27.36■■□□□ 1.97
SORBS3-202ENST00000517500 PRELPP51888 382 aa27.36■■□□□ 1.97
SORBS3-202ENST00000517500 SPINK5Q9NQ38 1064 aaPredicted RBP27.36■■□□□ 1.97
SORBS3-202ENST00000517500 SH3TC1Q8TE82 1336 aa27.36■■□□□ 1.97
SORBS3-202ENST00000517500 ANKRD36CQ5JPF3 1778 aa27.35■■□□□ 1.97
SORBS3-202ENST00000517500 ARFGEF2Q9Y6D5 1785 aa27.35■■□□□ 1.97
SORBS3-202ENST00000517500 CC2D2BQ6DHV5 1058 aa27.35■■□□□ 1.97
SORBS3-202ENST00000517500 RPGRQ92834 1020 aaKnown RBP27.35■■□□□ 1.97
SORBS3-202ENST00000517500 RASSF7Q02833 373 aa27.34■■□□□ 1.97
SORBS3-202ENST00000517500 GRIPAP1Q4V328 841 aa27.34■■□□□ 1.97
SORBS3-202ENST00000517500 RTKN2Q8IZC4 609 aa27.34■■□□□ 1.97
SORBS3-202ENST00000517500 RBM17Q96I25 401 aaKnown RBP27.34■■□□□ 1.97
SORBS3-202ENST00000517500 SLC4A2P04920 1241 aa27.33■■□□□ 1.97
SORBS3-202ENST00000517500 CCDC93Q567U6 631 aa27.33■■□□□ 1.97
SORBS3-202ENST00000517500 KSR2Q6VAB6 950 aa27.33■■□□□ 1.97
SORBS3-202ENST00000517500 METTL22Q9BUU2 404 aaPredicted RBP27.33■■□□□ 1.97
SORBS3-202ENST00000517500 FER1L6Q2WGJ9 1857 aa27.32■■□□□ 1.96
SORBS3-202ENST00000517500 EXOSC9Q06265 439 aaKnown RBP27.32■■□□□ 1.96
SORBS3-202ENST00000517500 CCDC191Q8NCU4 936 aa27.32■■□□□ 1.96
SORBS3-202ENST00000517500 TAOK3Q9H2K8 898 aa27.32■■□□□ 1.96
SORBS3-202ENST00000517500 ZNF219Q9P2Y4 722 aaPredicted RBP27.32■■□□□ 1.96
SORBS3-202ENST00000517500 ATP5J2-PTCD1G3V325 749 aa27.31■■□□□ 1.96
SORBS3-202ENST00000517500 C3orf67Q6ZVT6 689 aa27.31■■□□□ 1.96
SORBS3-202ENST00000517500 SYNE4Q8N205 404 aa27.31■■□□□ 1.96
SORBS3-202ENST00000517500 TNRC6CQ9HCJ0 1690 aaKnown RBP27.3■■□□□ 1.96
SORBS3-202ENST00000517500 HCLS1P14317 486 aaPredicted RBP27.29■■□□□ 1.96
SORBS3-202ENST00000517500 C1QTNF8P60827 252 aa27.29■■□□□ 1.96
SORBS3-202ENST00000517500 ZBTB38Q8NAP3 1195 aaPredicted RBP27.29■■□□□ 1.96
SORBS3-202ENST00000517500 PI4KAP2A4QPH2 592 aa27.28■■□□□ 1.96
SORBS3-202ENST00000517500 BBOX1O75936 387 aa27.28■■□□□ 1.96
SORBS3-202ENST00000517500 HSP90B1P14625 803 aaKnown RBP27.28■■□□□ 1.96
SORBS3-202ENST00000517500 SF3B3Q15393 1217 aaKnown RBP27.28■■□□□ 1.96
SORBS3-202ENST00000517500 PI4KAP1Q8N8J0 262 aa27.28■■□□□ 1.96
SORBS3-202ENST00000517500 FAM89AQ96GI7 184 aa27.28■■□□□ 1.96
SORBS3-202ENST00000517500 KDM2BQ8NHM5 1336 aa27.27■■□□□ 1.96
SORBS3-202ENST00000517500 FKBP4Q02790 459 aaKnown RBP eCLIP27.27■■□□□ 1.96
SORBS3-202ENST00000517500 ZNF526Q8TF50 670 aaPredicted RBP27.27■■□□□ 1.96
SORBS3-202ENST00000517500 MAP3K2Q9Y2U5 619 aa27.27■■□□□ 1.96
SORBS3-202ENST00000517500 KIF3CO14782 793 aa27.26■■□□□ 1.95
SORBS3-202ENST00000517500 G2E3Q7L622 706 aa27.26■■□□□ 1.95
SORBS3-202ENST00000517500 PSMD1Q99460 953 aa27.26■■□□□ 1.95
SORBS3-202ENST00000517500 MYD88Q99836 296 aa27.26■■□□□ 1.95
SORBS3-202ENST00000517500 CACNA1FO60840 1977 aa27.26■■□□□ 1.95
SORBS3-202ENST00000517500 GLTPD2A6NH11 291 aa27.25■■□□□ 1.95
SORBS3-202ENST00000517500 TCERG1O14776 1098 aaKnown RBP27.25■■□□□ 1.95
SORBS3-202ENST00000517500 SNED1Q8TER0 1413 aa27.24■■□□□ 1.95
SORBS3-202ENST00000517500 E9PSI1 815 aa27.24■■□□□ 1.95
SORBS3-202ENST00000517500 PCCAP05165 728 aaPredicted RBP27.24■■□□□ 1.95
SORBS3-202ENST00000517500 DIEXFQ68CQ4 756 aaKnown RBP27.24■■□□□ 1.95
SORBS3-202ENST00000517500 CWC25Q9NXE8 425 aaPredicted RBP27.24■■□□□ 1.95
SORBS3-202ENST00000517500 FLIIQ13045 1269 aa27.23■■□□□ 1.95
SORBS3-202ENST00000517500 OLFM4Q6UX06 510 aa27.23■■□□□ 1.95
SORBS3-202ENST00000517500 DDX46Q7L014 1031 aaKnown RBP27.23■■□□□ 1.95
SORBS3-202ENST00000517500 ATP6V0A2Q9Y487 856 aa27.23■■□□□ 1.95
SORBS3-202ENST00000517500 CACNA1SQ13698 1873 aa27.22■■□□□ 1.95
SORBS3-202ENST00000517500 CCDC88AQ3V6T2 1871 aa27.22■■□□□ 1.95
SORBS3-202ENST00000517500 IRS4O14654 1257 aaPredicted RBP27.22■■□□□ 1.95
SORBS3-202ENST00000517500 NEXNQ0ZGT2 675 aa27.22■■□□□ 1.95
SORBS3-202ENST00000517500 DPY19L2Q6NUT2 758 aa27.22■■□□□ 1.95
SORBS3-202ENST00000517500 TMC4Q7Z404 712 aa27.22■■□□□ 1.95
SORBS3-202ENST00000517500 SP8Q8IXZ3 490 aa27.22■■□□□ 1.95
SORBS3-202ENST00000517500 PPEF1O14829 653 aaPredicted RBP27.21■■□□□ 1.95
SORBS3-202ENST00000517500 IGKV5-2P06315 115 aa27.21■■□□□ 1.95
SORBS3-202ENST00000517500 SLFN5Q08AF3 891 aa27.21■■□□□ 1.95
SORBS3-202ENST00000517500 DICER1Q9UPY3 1922 aaKnown RBP27.21■■□□□ 1.95
SORBS3-202ENST00000517500 ABCC4O15439 1325 aa27.2■■□□□ 1.95
SORBS3-202ENST00000517500 GRAPQ13588 217 aa27.2■■□□□ 1.94
SORBS3-202ENST00000517500 GRAPLQ8TC17 118 aaPredicted RBP27.2■■□□□ 1.94
SORBS3-202ENST00000517500 TMX4Q9H1E5 349 aaPredicted RBP27.2■■□□□ 1.94
SORBS3-202ENST00000517500 VPS33BQ9H267 617 aa27.2■■□□□ 1.94
SORBS3-202ENST00000517500 NMRK2Q9NPI5 230 aa27.2■■□□□ 1.94
SORBS3-202ENST00000517500 TRMT2AQ8IZ69 625 aaKnown RBP27.19■■□□□ 1.94
SORBS3-202ENST00000517500 CDHR2Q9BYE9 1310 aa27.17■■□□□ 1.94
SORBS3-202ENST00000517500 PDE8AO60658 829 aa27.17■■□□□ 1.94
SORBS3-202ENST00000517500 TOMM70O94826 608 aa27.17■■□□□ 1.94
SORBS3-202ENST00000517500 FKBP5Q13451 457 aaPredicted RBP27.17■■□□□ 1.94
SORBS3-202ENST00000517500 ZNF428Q96B54 188 aa27.17■■□□□ 1.94
SORBS3-202ENST00000517500 ZNF277Q9NRM2 450 aaPredicted RBP27.17■■□□□ 1.94
SORBS3-202ENST00000517500 NEURL1BA8MQ27 555 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms