RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.38
PCDHGA1-202ENST00000517417 CCDC70Q6NSX1 233 aa12.71□□□□□ -0.38
PCDHGA1-202ENST00000517417 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.38
PCDHGA1-202ENST00000517417 CAMSAP1Q5T5Y3 1602 aa12.71□□□□□ -0.38
PCDHGA1-202ENST00000517417 PPP1R1BQ9UD71 204 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 SIGLEC1Q9BZZ2 1709 aa12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 QRICH2Q9H0J4 1663 aa12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 CHL1O00533 1208 aa12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 JMYQ8N9B5 988 aa12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 AK2P54819 239 aa12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 DNM1Q05193 864 aaKnown RBP12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 RHPN1Q8TCX5 695 aa12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 NSFL1CQ9UNZ2 370 aaKnown RBP12.7□□□□□ -0.38
PCDHGA1-202ENST00000517417 GPTP24298 496 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 KRT32Q14532 448 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 ZSCAN25Q6NSZ9 544 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 MAP3K2Q9Y2U5 619 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 TTC21BQ7Z4L5 1316 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 IFIT1P09914 478 aaKnown RBP12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 UBAC1Q9BSL1 405 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
PCDHGA1-202ENST00000517417 ZNF853P0CG23 659 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 GPS2Q13227 327 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 TBX22Q9Y458 520 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 FAM135BQ49AJ0 1406 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 SERPINC1P01008 464 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 SYT1P21579 422 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 MYRIPQ8NFW9 859 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 IGHMBP2P38935 993 aaKnown RBP12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 PPFIA3O75145 1194 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 SNRKQ9NRH2 765 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 NRXN1Q9ULB1 1477 aa12.68□□□□□ -0.38
PCDHGA1-202ENST00000517417 PIK3R4Q99570 1358 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 IMMTQ16891 758 aaKnown RBP12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 TSC1Q92574 1164 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 HYPKQ9NX55 129 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 PNMA6EA0A0J9YXQ4 647 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 TNNT1P13805 278 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 CPA1P15085 419 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 TXLNAP40222 546 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 GUCY1B3Q02153 619 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 IFIT5Q13325 482 aaKnown RBP12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 SMAP1Q8IYB5 467 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 CFAP45Q9UL16 551 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 MYOM1P52179 1685 aa12.67□□□□□ -0.38
PCDHGA1-202ENST00000517417 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 CDK5RAP3Q96JB5 506 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 KIAA1210Q9ULL0 1709 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 EPS15P42566 896 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 U3KPZ7 1027 aaPredicted RBP12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 DTNBO60941 627 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 ECHDC1Q9NTX5 307 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 GLI2P10070 1586 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
PCDHGA1-202ENST00000517417 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
PCDHGA1-202ENST00000517417 RBM5P52756 815 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCDHGA1-202ENST00000517417 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
PCDHGA1-202ENST00000517417 FAM200AQ8TCP9 573 aa12.65□□□□□ -0.38
PCDHGA1-202ENST00000517417 PRM3Q9NNZ6 103 aa12.65□□□□□ -0.38
PCDHGA1-202ENST00000517417 CCDC186Q7Z3E2 898 aa12.65□□□□□ -0.38
PCDHGA1-202ENST00000517417 ARHGAP31Q2M1Z3 1444 aa12.65□□□□□ -0.39
PCDHGA1-202ENST00000517417 SOS1Q07889 1333 aaPredicted RBP12.65□□□□□ -0.39
PCDHGA1-202ENST00000517417 PIP4K2AP48426 406 aaPredicted RBP12.65□□□□□ -0.39
PCDHGA1-202ENST00000517417 FILIP1LQ4L180 1135 aa12.65□□□□□ -0.39
PCDHGA1-202ENST00000517417 FAM177A1Q8N128 213 aaPredicted RBP12.65□□□□□ -0.39
PCDHGA1-202ENST00000517417 PDLIM2Q96JY6 352 aa12.65□□□□□ -0.39
PCDHGA1-202ENST00000517417 AKAP2Q9Y2D5 859 aa12.65□□□□□ -0.39
PCDHGA1-202ENST00000517417 ZDHHC9Q9Y397 364 aa12.65□□□□□ -0.39
PCDHGA1-202ENST00000517417 HSPA2P54652 639 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 IFNL2Q8IZJ0 200 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 ZHX3Q9H4I2 956 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 DDX19AQ9NUU7 478 aaKnown RBP12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 TULP4Q9NRJ4 1543 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 IFT172Q9UG01 1749 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 PTGS1P23219 599 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 PPLO60437 1756 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 NEURL4Q96JN8 1562 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 ZSCAN29Q8IWY8 852 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA1-202ENST00000517417 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms