RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 CAMKK2Q96RR4 588 aa19.42■□□□□ 0.7
TRPS1-206ENST00000517323 RWDD1Q9H446 243 aaPredicted RBP19.42■□□□□ 0.7
TRPS1-206ENST00000517323 TBC1D9BQ66K14 1250 aa19.42■□□□□ 0.7
TRPS1-206ENST00000517323 PPP1R42Q7Z4L9 355 aa19.42■□□□□ 0.7
TRPS1-206ENST00000517323 TFCP2L1Q9NZI6 479 aa19.42■□□□□ 0.7
TRPS1-206ENST00000517323 NIP7Q9Y221 180 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRPS1-206ENST00000517323 SCN7AQ01118 1682 aa19.41■□□□□ 0.7
TRPS1-206ENST00000517323 ERVV-1B6SEH8 477 aa19.41■□□□□ 0.7
TRPS1-206ENST00000517323 HDAC1Q13547 482 aaPredicted RBP19.41■□□□□ 0.7
TRPS1-206ENST00000517323 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
TRPS1-206ENST00000517323 SUSD4Q5VX71 490 aa19.41■□□□□ 0.7
TRPS1-206ENST00000517323 CENPQQ7L2Z9 268 aaPredicted RBP19.41■□□□□ 0.7
TRPS1-206ENST00000517323 KLHDC4Q8TBB5 520 aa19.41■□□□□ 0.7
TRPS1-206ENST00000517323 UTYO14607 1347 aa19.4■□□□□ 0.7
TRPS1-206ENST00000517323 RFC4P35249 363 aa19.4■□□□□ 0.7
TRPS1-206ENST00000517323 AAMPQ13685 434 aa19.4■□□□□ 0.7
TRPS1-206ENST00000517323 NUTM1Q86Y26 1132 aa19.4■□□□□ 0.7
TRPS1-206ENST00000517323 ZNF34Q8IZ26 560 aa19.4■□□□□ 0.7
TRPS1-206ENST00000517323 CCDC191Q8NCU4 936 aa19.4■□□□□ 0.7
TRPS1-206ENST00000517323 CHMP4BQ9H444 224 aaKnown RBP19.4■□□□□ 0.7
TRPS1-206ENST00000517323 SRGAP3O43295 1099 aa19.4■□□□□ 0.7
TRPS1-206ENST00000517323 EXOC6BQ9Y2D4 811 aa19.4■□□□□ 0.7
TRPS1-206ENST00000517323 H7C1W4 665 aa19.39■□□□□ 0.69
TRPS1-206ENST00000517323 ZPR1O75312 459 aa19.39■□□□□ 0.69
TRPS1-206ENST00000517323 NARFQ9UHQ1 456 aa19.39■□□□□ 0.69
TRPS1-206ENST00000517323 MSH5O43196 834 aa19.39■□□□□ 0.69
TRPS1-206ENST00000517323 AKT1S1Q96B36 256 aa19.39■□□□□ 0.69
TRPS1-206ENST00000517323 TRMT112Q9UI30 125 aaKnown RBP19.39■□□□□ 0.69
TRPS1-206ENST00000517323 PA2G4Q9UQ80 394 aaKnown RBP19.39■□□□□ 0.69
TRPS1-206ENST00000517323 PDGFDQ9GZP0 370 aaPredicted RBP19.38■□□□□ 0.69
TRPS1-206ENST00000517323 USP42Q9H9J4 1324 aaKnown RBP19.38■□□□□ 0.69
TRPS1-206ENST00000517323 SMARCA5O60264 1052 aaPredicted RBP19.37■□□□□ 0.69
TRPS1-206ENST00000517323 RGS3P49796 1198 aa19.37■□□□□ 0.69
TRPS1-206ENST00000517323 ATP8B2P98198 1209 aa19.37■□□□□ 0.69
TRPS1-206ENST00000517323 RPAP2Q8IXW5 612 aaPredicted RBP19.37■□□□□ 0.69
TRPS1-206ENST00000517323 SF3B2Q13435 895 aaKnown RBP19.37■□□□□ 0.69
TRPS1-206ENST00000517323 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
TRPS1-206ENST00000517323 CHMP3Q9Y3E7 222 aa19.37■□□□□ 0.69
TRPS1-206ENST00000517323 HCLS1P14317 486 aaPredicted RBP19.36■□□□□ 0.69
TRPS1-206ENST00000517323 FOXO4P98177 505 aa19.36■□□□□ 0.69
TRPS1-206ENST00000517323 COL23A1Q86Y22 540 aaPredicted RBP19.36■□□□□ 0.69
TRPS1-206ENST00000517323 RGPD3A6NKT7 1758 aaPredicted RBP19.35■□□□□ 0.69
TRPS1-206ENST00000517323 RGPD4Q7Z3J3 1758 aa19.35■□□□□ 0.69
TRPS1-206ENST00000517323 TRIM28Q13263 835 aaKnown RBP19.35■□□□□ 0.69
TRPS1-206ENST00000517323 HSP90AB3PQ58FF7 597 aa19.35■□□□□ 0.69
TRPS1-206ENST00000517323 LMBR1LQ6UX01 489 aa19.35■□□□□ 0.69
TRPS1-206ENST00000517323 ZBTB38Q8NAP3 1195 aaPredicted RBP19.35■□□□□ 0.69
TRPS1-206ENST00000517323 LNPKQ9C0E8 428 aa19.34■□□□□ 0.69
TRPS1-206ENST00000517323 SIL1Q9H173 461 aa19.34■□□□□ 0.69
TRPS1-206ENST00000517323 UTRNP46939 3433 aa19.34■□□□□ 0.69
TRPS1-206ENST00000517323 GYS1P13807 737 aa19.34■□□□□ 0.69
TRPS1-206ENST00000517323 ANKRD45Q5TZF3 282 aa19.34■□□□□ 0.69
TRPS1-206ENST00000517323 MSL1Q68DK7 614 aa19.34■□□□□ 0.69
TRPS1-206ENST00000517323 SMC5Q8IY18 1101 aa19.34■□□□□ 0.69
TRPS1-206ENST00000517323 PCCAP05165 728 aaPredicted RBP19.33■□□□□ 0.69
TRPS1-206ENST00000517323 BAG6P46379 1132 aa19.33■□□□□ 0.69
TRPS1-206ENST00000517323 ZNF652Q9Y2D9 606 aa19.33■□□□□ 0.69
TRPS1-206ENST00000517323 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.33■□□□□ 0.69
TRPS1-206ENST00000517323 PNPLA7Q6ZV29 1317 aa19.33■□□□□ 0.69
TRPS1-206ENST00000517323 NTSR2O95665 410 aa19.33■□□□□ 0.68
TRPS1-206ENST00000517323 SSH3Q8TE77 659 aa19.33■□□□□ 0.68
TRPS1-206ENST00000517323 DCTPP1Q9H773 170 aa19.33■□□□□ 0.68
TRPS1-206ENST00000517323 TAF1P21675 1872 aa19.33■□□□□ 0.68
TRPS1-206ENST00000517323 DDX60Q8IY21 1712 aaKnown RBP19.32■□□□□ 0.68
TRPS1-206ENST00000517323 IRS4O14654 1257 aaPredicted RBP19.32■□□□□ 0.68
TRPS1-206ENST00000517323 SSFA2P28290 1259 aa19.32■□□□□ 0.68
TRPS1-206ENST00000517323 POLA2Q14181 598 aa19.32■□□□□ 0.68
TRPS1-206ENST00000517323 NFIXQ14938 502 aa19.32■□□□□ 0.68
TRPS1-206ENST00000517323 ERFEQ4G0M1 354 aa19.32■□□□□ 0.68
TRPS1-206ENST00000517323 C3orf67Q6ZVT6 689 aa19.32■□□□□ 0.68
TRPS1-206ENST00000517323 C16orf71Q8IYS4 520 aaPredicted RBP19.32■□□□□ 0.68
TRPS1-206ENST00000517323 ZNF594Q96JF6 807 aaPredicted RBP19.32■□□□□ 0.68
TRPS1-206ENST00000517323 CASZ1Q86V15 1759 aa19.32■□□□□ 0.68
TRPS1-206ENST00000517323 PDE4AP27815 886 aa19.32■□□□□ 0.68
TRPS1-206ENST00000517323 CLEC4GQ6UXB4 293 aa19.32■□□□□ 0.68
TRPS1-206ENST00000517323 UTP14AQ9BVJ6 771 aaKnown RBP19.32■□□□□ 0.68
TRPS1-206ENST00000517323 MYH3P11055 1940 aa19.31■□□□□ 0.68
TRPS1-206ENST00000517323 SURF6O75683 361 aaKnown RBP19.31■□□□□ 0.68
TRPS1-206ENST00000517323 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
TRPS1-206ENST00000517323 OTUD7AQ8TE49 926 aaPredicted RBP19.31■□□□□ 0.68
TRPS1-206ENST00000517323 SETDB2Q96T68 719 aa19.3■□□□□ 0.68
TRPS1-206ENST00000517323 COL4A1P02462 1669 aa19.3■□□□□ 0.68
TRPS1-206ENST00000517323 ABCC12Q96J65 1359 aa19.3■□□□□ 0.68
TRPS1-206ENST00000517323 HMMRO75330 724 aa19.29■□□□□ 0.68
TRPS1-206ENST00000517323 MTX1Q13505 466 aa19.29■□□□□ 0.68
TRPS1-206ENST00000517323 SLC15A2Q16348 729 aa19.29■□□□□ 0.68
TRPS1-206ENST00000517323 IL1RAPL2Q9NP60 686 aa19.29■□□□□ 0.68
TRPS1-206ENST00000517323 SH3TC1Q8TE82 1336 aa19.29■□□□□ 0.68
TRPS1-206ENST00000517323 ADRA2BP18089 450 aa19.29■□□□□ 0.68
TRPS1-206ENST00000517323 NUCB1Q02818 461 aa19.29■□□□□ 0.68
TRPS1-206ENST00000517323 RABL6Q3YEC7 729 aaPredicted RBP19.29■□□□□ 0.68
TRPS1-206ENST00000517323 GREM2Q9H772 168 aa19.29■□□□□ 0.68
TRPS1-206ENST00000517323 COL24A1Q17RW2 1714 aa19.28■□□□□ 0.68
TRPS1-206ENST00000517323 RFX5P48382 616 aaPredicted RBP19.28■□□□□ 0.68
TRPS1-206ENST00000517323 NBPF5PQ86XG9 351 aaPredicted RBP19.28■□□□□ 0.68
TRPS1-206ENST00000517323 DDR1Q08345 913 aa19.27■□□□□ 0.68
TRPS1-206ENST00000517323 CHD1LQ86WJ1 897 aa19.27■□□□□ 0.68
TRPS1-206ENST00000517323 GCC1Q96CN9 775 aa19.27■□□□□ 0.68
TRPS1-206ENST00000517323 PARP10Q53GL7 1025 aa19.27■□□□□ 0.68
TRPS1-206ENST00000517323 ILDR2Q71H61 639 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms