RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 TNFRSF10BO14763 440 aa10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 IDH3AP50213 366 aa10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 KCNQ4P56696 695 aa10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 SPEM2Q0P670 501 aa10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 ZNF468Q5VIY5 522 aaPredicted RBP10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 SLCO4C1Q6ZQN7 724 aa10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 SYT9Q86SS6 491 aa10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 GOLGA6L1Q8N7Z2 621 aa10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 IFT43Q96FT9 208 aa10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 GDF2Q9UK05 429 aaPredicted RBP10.4□□□□□ -0.74
SCARNA1-201ENST00000517138 MICAL2O94851 1124 aa10.39□□□□□ -0.75
SCARNA1-201ENST00000517138 INPP5BP32019 993 aa10.39□□□□□ -0.75
SCARNA1-201ENST00000517138 C16orf46Q6P387 395 aa10.39□□□□□ -0.75
SCARNA1-201ENST00000517138 ETFBKMTQ8IXQ9 262 aa10.39□□□□□ -0.75
SCARNA1-201ENST00000517138 NEDD1Q8NHV4 660 aa10.39□□□□□ -0.75
SCARNA1-201ENST00000517138 OPLAHO14841 1288 aa10.38□□□□□ -0.75
SCARNA1-201ENST00000517138 EPXP11678 715 aa10.38□□□□□ -0.75
SCARNA1-201ENST00000517138 HIF1AQ16665 826 aa10.38□□□□□ -0.75
SCARNA1-201ENST00000517138 PHLDB3Q6NSJ2 640 aa10.38□□□□□ -0.75
SCARNA1-201ENST00000517138 COL26A1Q96A83 441 aa10.38□□□□□ -0.75
SCARNA1-201ENST00000517138 CNTNAP5Q8WYK1 1306 aa10.37□□□□□ -0.75
SCARNA1-201ENST00000517138 HOXB4P17483 251 aaPredicted RBP10.37□□□□□ -0.75
SCARNA1-201ENST00000517138 SSFA2P28290 1259 aa10.37□□□□□ -0.75
SCARNA1-201ENST00000517138 ADH6P28332 368 aa10.37□□□□□ -0.75
SCARNA1-201ENST00000517138 GSK3AP49840 483 aa10.37□□□□□ -0.75
SCARNA1-201ENST00000517138 SNRPNP63162 240 aaKnown RBP10.37□□□□□ -0.75
SCARNA1-201ENST00000517138 TREML1Q86YW5 311 aa10.37□□□□□ -0.75
SCARNA1-201ENST00000517138 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.75
SCARNA1-201ENST00000517138 MARSP56192 900 aaKnown RBP10.35□□□□□ -0.75
SCARNA1-201ENST00000517138 BHMTQ93088 406 aa10.35□□□□□ -0.75
SCARNA1-201ENST00000517138 MDFIQ99750 246 aa10.35□□□□□ -0.75
SCARNA1-201ENST00000517138 GSX2Q9BZM3 304 aa10.35□□□□□ -0.75
SCARNA1-201ENST00000517138 AVENQ9NQS1 362 aaPredicted RBP10.35□□□□□ -0.75
SCARNA1-201ENST00000517138 ENAMQ9NRM1 1142 aa10.35□□□□□ -0.75
SCARNA1-201ENST00000517138 LRRC4BQ9NT99 713 aa10.35□□□□□ -0.75
SCARNA1-201ENST00000517138 ZBTB39O15060 712 aa10.34□□□□□ -0.75
SCARNA1-201ENST00000517138 PTCD1O75127 700 aaKnown RBP10.34□□□□□ -0.75
SCARNA1-201ENST00000517138 RETREG2Q8NC44 543 aa10.34□□□□□ -0.75
SCARNA1-201ENST00000517138 BTBD6Q96KE9 485 aa10.34□□□□□ -0.75
SCARNA1-201ENST00000517138 ARSDP51689 593 aa10.33□□□□□ -0.76
SCARNA1-201ENST00000517138 KRT25Q7Z3Z0 450 aa10.32□□□□□ -0.76
SCARNA1-201ENST00000517138 RGL4Q8IZJ4 473 aa10.32□□□□□ -0.76
SCARNA1-201ENST00000517138 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
SCARNA1-201ENST00000517138 SIN3BO75182 1162 aa10.31□□□□□ -0.76
SCARNA1-201ENST00000517138 AMPD1P23109 780 aa10.31□□□□□ -0.76
SCARNA1-201ENST00000517138 BRD2P25440 801 aaKnown RBP10.31□□□□□ -0.76
SCARNA1-201ENST00000517138 MTMR3Q13615 1198 aa10.31□□□□□ -0.76
SCARNA1-201ENST00000517138 CHSY3Q70JA7 882 aa10.31□□□□□ -0.76
SCARNA1-201ENST00000517138 RRAGCQ9HB90 399 aa10.31□□□□□ -0.76
SCARNA1-201ENST00000517138 ZFATQ9P243 1243 aa10.31□□□□□ -0.76
SCARNA1-201ENST00000517138 NFKB1P19838 968 aa10.3□□□□□ -0.76
SCARNA1-201ENST00000517138 TARSP26639 723 aaKnown RBP10.3□□□□□ -0.76
SCARNA1-201ENST00000517138 IRS1P35568 1242 aa10.3□□□□□ -0.76
SCARNA1-201ENST00000517138 CCINQ13939 588 aa10.3□□□□□ -0.76
SCARNA1-201ENST00000517138 KCNMB2Q9Y691 235 aa10.3□□□□□ -0.76
SCARNA1-201ENST00000517138 TBC1D8BQ0IIM8 1120 aa10.29□□□□□ -0.76
SCARNA1-201ENST00000517138 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
SCARNA1-201ENST00000517138 TNFRSF25Q93038 417 aa10.29□□□□□ -0.76
SCARNA1-201ENST00000517138 IGFLR1Q9H665 355 aa10.29□□□□□ -0.76
SCARNA1-201ENST00000517138 STIM2Q9P246 746 aa10.29□□□□□ -0.76
SCARNA1-201ENST00000517138 ELOA3CA0A087WX78 387 aaPredicted RBP10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 ELOA3DA6NLF2 546 aaPredicted RBP10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 SASH3O75995 380 aa10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 KCNMA1Q12791 1236 aa10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 ELOA3BQ3SY89 546 aa10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 ATCAYQ86WG3 371 aa10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 ELOA3Q8NG57 546 aa10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 GTF3C2Q8WUA4 911 aaPredicted RBP10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 USTQ9Y2C2 406 aa10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 STARD13Q9Y3M8 1113 aa10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.28□□□□□ -0.76
SCARNA1-201ENST00000517138 ADARB2-AS1A8MUL3 147 aa10.27□□□□□ -0.77
SCARNA1-201ENST00000517138 EPB42P16452 691 aa10.27□□□□□ -0.77
SCARNA1-201ENST00000517138 DGKGP49619 791 aa10.27□□□□□ -0.77
SCARNA1-201ENST00000517138 TRIP4Q15650 581 aaPredicted RBP10.27□□□□□ -0.77
SCARNA1-201ENST00000517138 LINC00114Q6XXX2 140 aa10.27□□□□□ -0.77
SCARNA1-201ENST00000517138 SCARF2Q96GP6 870 aaPredicted RBP10.27□□□□□ -0.77
SCARNA1-201ENST00000517138 ADH7P40394 386 aa10.26□□□□□ -0.77
SCARNA1-201ENST00000517138 ZAP70P43403 619 aa10.26□□□□□ -0.77
SCARNA1-201ENST00000517138 RASSF7Q02833 373 aa10.26□□□□□ -0.77
SCARNA1-201ENST00000517138 C8orf86Q6ZUL3 223 aa10.26□□□□□ -0.77
SCARNA1-201ENST00000517138 HELQQ8TDG4 1101 aa10.26□□□□□ -0.77
SCARNA1-201ENST00000517138 PNMA5Q96PV4 448 aa10.26□□□□□ -0.77
SCARNA1-201ENST00000517138 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
SCARNA1-201ENST00000517138 GPR152Q8TDT2 470 aa10.25□□□□□ -0.77
SCARNA1-201ENST00000517138 UBE2OQ9C0C9 1292 aaKnown RBP10.25□□□□□ -0.77
SCARNA1-201ENST00000517138 SUV39H2Q9H5I1 410 aa10.25□□□□□ -0.77
SCARNA1-201ENST00000517138 ANO2Q9NQ90 1003 aa10.25□□□□□ -0.77
SCARNA1-201ENST00000517138 XYLBO75191 536 aa10.24□□□□□ -0.77
SCARNA1-201ENST00000517138 ALBP02768 609 aa10.24□□□□□ -0.77
SCARNA1-201ENST00000517138 BEND7Q8N7W2 519 aaPredicted RBP10.24□□□□□ -0.77
SCARNA1-201ENST00000517138 DNAJB12Q9NXW2 375 aaKnown RBP10.24□□□□□ -0.77
SCARNA1-201ENST00000517138 ZBTB42B2RXF5 422 aa10.23□□□□□ -0.77
SCARNA1-201ENST00000517138 MPSTP25325 297 aa10.23□□□□□ -0.77
SCARNA1-201ENST00000517138 NAGPAQ9UK23 515 aa10.23□□□□□ -0.77
SCARNA1-201ENST00000517138 RARAP10276 462 aa10.22□□□□□ -0.77
SCARNA1-201ENST00000517138 COL8A1P27658 744 aa10.22□□□□□ -0.77
SCARNA1-201ENST00000517138 MLLT1Q03111 559 aaPredicted RBP10.22□□□□□ -0.77
SCARNA1-201ENST00000517138 ZNF211Q13398 564 aaPredicted RBP10.22□□□□□ -0.77
SCARNA1-201ENST00000517138 PODNQ7Z5L7 613 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms