RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 USP42Q9H9J4 1324 aaKnown RBP31.09■■■□□ 2.57
TUSC3-213ENST00000515859 GPTP24298 496 aa31.09■■■□□ 2.57
TUSC3-213ENST00000515859 ZNF827Q17R98 1081 aa31.09■■■□□ 2.57
TUSC3-213ENST00000515859 CENPQQ7L2Z9 268 aaPredicted RBP31.09■■■□□ 2.57
TUSC3-213ENST00000515859 ANKRD36CQ5JPF3 1778 aa31.08■■■□□ 2.57
TUSC3-213ENST00000515859 IGHDP01880 384 aa31.07■■■□□ 2.56
TUSC3-213ENST00000515859 UBE3BQ7Z3V4 1068 aa31.07■■■□□ 2.56
TUSC3-213ENST00000515859 DEFB132Q7Z7B7 95 aa31.07■■■□□ 2.56
TUSC3-213ENST00000515859 KDM2BQ8NHM5 1336 aa31.07■■■□□ 2.56
TUSC3-213ENST00000515859 PCCAP05165 728 aaPredicted RBP31.06■■■□□ 2.56
TUSC3-213ENST00000515859 CASP7P55210 303 aa31.06■■■□□ 2.56
TUSC3-213ENST00000515859 ZBTB38Q8NAP3 1195 aaPredicted RBP31.06■■■□□ 2.56
TUSC3-213ENST00000515859 BCL2L12Q9HB09 334 aa31.06■■■□□ 2.56
TUSC3-213ENST00000515859 SRP68Q9UHB9 627 aaKnown RBP31.06■■■□□ 2.56
TUSC3-213ENST00000515859 NIP7Q9Y221 180 aaKnown RBP eCLIP31.06■■■□□ 2.56
TUSC3-213ENST00000515859 SCN7AQ01118 1682 aa31.06■■■□□ 2.56
TUSC3-213ENST00000515859 HMMRO75330 724 aa31.06■■■□□ 2.56
TUSC3-213ENST00000515859 SIRT2Q8IXJ6 389 aa31.06■■■□□ 2.56
TUSC3-213ENST00000515859 UBN2Q6ZU65 1347 aa31.05■■■□□ 2.56
TUSC3-213ENST00000515859 ATP8B2P98198 1209 aa31.05■■■□□ 2.56
TUSC3-213ENST00000515859 SUCLG2Q96I99 432 aa31.04■■■□□ 2.56
TUSC3-213ENST00000515859 PPP1R42Q7Z4L9 355 aa31.03■■■□□ 2.56
TUSC3-213ENST00000515859 C4AP0C0L4 1744 aa31.03■■■□□ 2.56
TUSC3-213ENST00000515859 TRMT112Q9UI30 125 aaKnown RBP31.02■■■□□ 2.56
TUSC3-213ENST00000515859 MTX1Q13505 466 aa31.02■■■□□ 2.56
TUSC3-213ENST00000515859 KAZALD1Q96I82 304 aa31.02■■■□□ 2.56
TUSC3-213ENST00000515859 STK32BQ9NY57 414 aa31.02■■■□□ 2.56
TUSC3-213ENST00000515859 SLC15A2Q16348 729 aa31.01■■■□□ 2.55
TUSC3-213ENST00000515859 UTP14AQ9BVJ6 771 aaKnown RBP31.01■■■□□ 2.55
TUSC3-213ENST00000515859 CDHR2Q9BYE9 1310 aa31■■■□□ 2.55
TUSC3-213ENST00000515859 SUSD4Q5VX71 490 aa31■■■□□ 2.55
TUSC3-213ENST00000515859 TBC1D9BQ66K14 1250 aa31■■■□□ 2.55
TUSC3-213ENST00000515859 JARID2Q92833 1246 aaPredicted RBP31■■■□□ 2.55
TUSC3-213ENST00000515859 SETDB2Q96T68 719 aa31■■■□□ 2.55
TUSC3-213ENST00000515859 FAM89AQ96GI7 184 aa30.99■■■□□ 2.55
TUSC3-213ENST00000515859 BICC1Q9H694 974 aaKnown RBP30.99■■■□□ 2.55
TUSC3-213ENST00000515859 RTL5Q5HYW3 569 aaPredicted RBP30.98■■■□□ 2.55
TUSC3-213ENST00000515859 GCC1Q96CN9 775 aa30.98■■■□□ 2.55
TUSC3-213ENST00000515859 PLA2G12BQ9BX93 195 aa30.98■■■□□ 2.55
TUSC3-213ENST00000515859 SH3TC1Q8TE82 1336 aa30.97■■■□□ 2.55
TUSC3-213ENST00000515859 GYS1P13807 737 aa30.97■■■□□ 2.55
TUSC3-213ENST00000515859 HSP90B1P14625 803 aaKnown RBP30.97■■■□□ 2.55
TUSC3-213ENST00000515859 RABL6Q3YEC7 729 aaPredicted RBP30.97■■■□□ 2.55
TUSC3-213ENST00000515859 COL23A1Q86Y22 540 aaPredicted RBP30.97■■■□□ 2.55
TUSC3-213ENST00000515859 SSH3Q8TE77 659 aa30.97■■■□□ 2.55
TUSC3-213ENST00000515859 ANO8Q9HCE9 1232 aaPredicted RBP30.97■■■□□ 2.55
TUSC3-213ENST00000515859 PNMA6EA0A0J9YXQ4 647 aa30.96■■■□□ 2.55
TUSC3-213ENST00000515859 SRGAP3O43295 1099 aa30.96■■■□□ 2.55
TUSC3-213ENST00000515859 UPF1Q92900 1129 aaKnown RBP eCLIP30.96■■■□□ 2.55
TUSC3-213ENST00000515859 NTSR2O95665 410 aa30.95■■■□□ 2.55
TUSC3-213ENST00000515859 BICDL1Q6ZP65 573 aa30.95■■■□□ 2.55
TUSC3-213ENST00000515859 SMC5Q8IY18 1101 aa30.95■■■□□ 2.55
TUSC3-213ENST00000515859 NYXQ9GZU5 481 aa30.95■■■□□ 2.55
TUSC3-213ENST00000515859 PNPLA7Q6ZV29 1317 aa30.95■■■□□ 2.54
TUSC3-213ENST00000515859 POLA2Q14181 598 aa30.95■■■□□ 2.54
TUSC3-213ENST00000515859 EPHA10Q5JZY3 1008 aa30.95■■■□□ 2.54
TUSC3-213ENST00000515859 DCTPP1Q9H773 170 aa30.95■■■□□ 2.54
TUSC3-213ENST00000515859 IRS4O14654 1257 aaPredicted RBP30.94■■■□□ 2.54
TUSC3-213ENST00000515859 FOXO4P98177 505 aa30.94■■■□□ 2.54
TUSC3-213ENST00000515859 MSH5O43196 834 aa30.93■■■□□ 2.54
TUSC3-213ENST00000515859 FAM177BA6PVY3 158 aa30.91■■■□□ 2.54
TUSC3-213ENST00000515859 NFIXQ14938 502 aa30.91■■■□□ 2.54
TUSC3-213ENST00000515859 NLGN1Q8N2Q7 840 aa30.91■■■□□ 2.54
TUSC3-213ENST00000515859 CARMIL3Q8ND23 1372 aa30.91■■■□□ 2.54
TUSC3-213ENST00000515859 TPTE2Q6XPS3 522 aa30.91■■■□□ 2.54
TUSC3-213ENST00000515859 TUBGCP6Q96RT7 1819 aa30.9■■■□□ 2.54
TUSC3-213ENST00000515859 PDE8AO60658 829 aa30.9■■■□□ 2.54
TUSC3-213ENST00000515859 LMBR1LQ6UX01 489 aa30.9■■■□□ 2.54
TUSC3-213ENST00000515859 NBPF5PQ86XG9 351 aaPredicted RBP30.9■■■□□ 2.54
TUSC3-213ENST00000515859 SYNE4Q8N205 404 aa30.9■■■□□ 2.54
TUSC3-213ENST00000515859 TM4SF1P30408 202 aa30.89■■■□□ 2.54
TUSC3-213ENST00000515859 GTF2E1P29083 439 aaPredicted RBP30.87■■■□□ 2.53
TUSC3-213ENST00000515859 COL24A1Q17RW2 1714 aa30.87■■■□□ 2.53
TUSC3-213ENST00000515859 QSER1Q2KHR3 1735 aa30.87■■■□□ 2.53
TUSC3-213ENST00000515859 CSF1RP07333 972 aa30.87■■■□□ 2.53
TUSC3-213ENST00000515859 CTSWP56202 376 aa30.85■■■□□ 2.53
TUSC3-213ENST00000515859 HSP90AB4PQ58FF6 505 aa30.85■■■□□ 2.53
TUSC3-213ENST00000515859 SLC10A5Q5PT55 438 aa30.85■■■□□ 2.53
TUSC3-213ENST00000515859 NUTM1Q86Y26 1132 aa30.85■■■□□ 2.53
TUSC3-213ENST00000515859 NOP58Q9Y2X3 529 aaKnown RBP30.84■■■□□ 2.53
TUSC3-213ENST00000515859 ERFEQ4G0M1 354 aa30.84■■■□□ 2.53
TUSC3-213ENST00000515859 TTLL11Q8NHH1 800 aa30.84■■■□□ 2.53
TUSC3-213ENST00000515859 CHMP3Q9Y3E7 222 aa30.84■■■□□ 2.53
TUSC3-213ENST00000515859 SURF6O75683 361 aaKnown RBP30.83■■■□□ 2.53
TUSC3-213ENST00000515859 HCLS1P14317 486 aaPredicted RBP30.83■■■□□ 2.53
TUSC3-213ENST00000515859 NUCB1Q02818 461 aa30.82■■■□□ 2.52
TUSC3-213ENST00000515859 COPRSQ9NQ92 184 aa30.82■■■□□ 2.52
TUSC3-213ENST00000515859 PDZRN3Q9UPQ7 1066 aa30.82■■■□□ 2.52
TUSC3-213ENST00000515859 NPHP1O15259 732 aa30.81■■■□□ 2.52
TUSC3-213ENST00000515859 RAB11FIP3O75154 756 aa30.81■■■□□ 2.52
TUSC3-213ENST00000515859 RFX5P48382 616 aaPredicted RBP30.81■■■□□ 2.52
TUSC3-213ENST00000515859 EXOC6BQ9Y2D4 811 aa30.81■■■□□ 2.52
TUSC3-213ENST00000515859 SERPINB2P05120 415 aa30.8■■■□□ 2.52
TUSC3-213ENST00000515859 CCDC57Q2TAC2 916 aa30.8■■■□□ 2.52
TUSC3-213ENST00000515859 ANKRD45Q5TZF3 282 aa30.8■■■□□ 2.52
TUSC3-213ENST00000515859 CNBD1Q8NA66 436 aa30.8■■■□□ 2.52
TUSC3-213ENST00000515859 ZBTB47Q9UFB7 747 aaPredicted RBP30.8■■■□□ 2.52
TUSC3-213ENST00000515859 POLRMTO00411 1230 aaKnown RBP30.79■■■□□ 2.52
TUSC3-213ENST00000515859 PTPN12Q05209 780 aaKnown RBP30.79■■■□□ 2.52
TUSC3-213ENST00000515859 IFIT5Q13325 482 aaKnown RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms