RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 C9orf131Q5VYM1 1079 aa20.32■□□□□ 0.84
SERF1B-208ENST00000515588 C3orf67Q6ZVT6 689 aa20.32■□□□□ 0.84
SERF1B-208ENST00000515588 SYNE4Q8N205 404 aa20.32■□□□□ 0.84
SERF1B-208ENST00000515588 ZNF428Q96B54 188 aa20.32■□□□□ 0.84
SERF1B-208ENST00000515588 ZNF219Q9P2Y4 722 aaPredicted RBP20.32■□□□□ 0.84
SERF1B-208ENST00000515588 ANKRD36CQ5JPF3 1778 aa20.31■□□□□ 0.84
SERF1B-208ENST00000515588 RIC1Q4ADV7 1423 aa20.31■□□□□ 0.84
SERF1B-208ENST00000515588 NFKBIEO00221 500 aa20.31■□□□□ 0.84
SERF1B-208ENST00000515588 ISCA1Q9BUE6 129 aa20.31■□□□□ 0.84
SERF1B-208ENST00000515588 ATP5J2-PTCD1G3V325 749 aa20.3■□□□□ 0.84
SERF1B-208ENST00000515588 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
SERF1B-208ENST00000515588 SLC10A5Q5PT55 438 aa20.3■□□□□ 0.84
SERF1B-208ENST00000515588 C7orf43Q8WVR3 580 aa20.3■□□□□ 0.84
SERF1B-208ENST00000515588 GOLGA2Q08379 1002 aa20.29■□□□□ 0.84
SERF1B-208ENST00000515588 CHMP4AQ9BY43 222 aa20.29■□□□□ 0.84
SERF1B-208ENST00000515588 VAMP4O75379 141 aa20.28■□□□□ 0.84
SERF1B-208ENST00000515588 RIC3Q7Z5B4 369 aa20.28■□□□□ 0.84
SERF1B-208ENST00000515588 ZNF526Q8TF50 670 aaPredicted RBP20.28■□□□□ 0.84
SERF1B-208ENST00000515588 RNF181Q9P0P0 153 aa20.28■□□□□ 0.84
SERF1B-208ENST00000515588 TRMT112Q9UI30 125 aaKnown RBP20.28■□□□□ 0.84
SERF1B-208ENST00000515588 RNF123Q5XPI4 1314 aa20.27■□□□□ 0.84
SERF1B-208ENST00000515588 SBF1O95248 1867 aa20.27■□□□□ 0.84
SERF1B-208ENST00000515588 ARFGEF2Q9Y6D5 1785 aa20.27■□□□□ 0.84
SERF1B-208ENST00000515588 HOXA10P31260 410 aaPredicted RBP20.27■□□□□ 0.84
SERF1B-208ENST00000515588 TRIM28Q13263 835 aaKnown RBP20.27■□□□□ 0.84
SERF1B-208ENST00000515588 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
SERF1B-208ENST00000515588 OLFM4Q6UX06 510 aa20.27■□□□□ 0.84
SERF1B-208ENST00000515588 G2E3Q7L622 706 aa20.27■□□□□ 0.84
SERF1B-208ENST00000515588 CACNA1SQ13698 1873 aa20.26■□□□□ 0.83
SERF1B-208ENST00000515588 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
SERF1B-208ENST00000515588 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
SERF1B-208ENST00000515588 STK31Q9BXU1 1019 aa20.26■□□□□ 0.83
SERF1B-208ENST00000515588 MYH16Q9H6N6 1097 aa20.26■□□□□ 0.83
SERF1B-208ENST00000515588 SLC4A2P04920 1241 aa20.25■□□□□ 0.83
SERF1B-208ENST00000515588 LMNB1P20700 586 aa20.25■□□□□ 0.83
SERF1B-208ENST00000515588 MIER1Q8N108 512 aa20.25■□□□□ 0.83
SERF1B-208ENST00000515588 RPGRQ92834 1020 aaKnown RBP20.25■□□□□ 0.83
SERF1B-208ENST00000515588 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
SERF1B-208ENST00000515588 SH3TC1Q8TE82 1336 aa20.25■□□□□ 0.83
SERF1B-208ENST00000515588 FAM89AQ96GI7 184 aa20.24■□□□□ 0.83
SERF1B-208ENST00000515588 MYD88Q99836 296 aa20.24■□□□□ 0.83
SERF1B-208ENST00000515588 GPBP1L1Q9HC44 474 aaPredicted RBP20.24■□□□□ 0.83
SERF1B-208ENST00000515588 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
SERF1B-208ENST00000515588 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
SERF1B-208ENST00000515588 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
SERF1B-208ENST00000515588 DDX58O95786 925 aaKnown RBP20.23■□□□□ 0.83
SERF1B-208ENST00000515588 SOGA3Q5TF21 947 aa20.23■□□□□ 0.83
SERF1B-208ENST00000515588 SLC51AQ86UW1 340 aa20.23■□□□□ 0.83
SERF1B-208ENST00000515588 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
SERF1B-208ENST00000515588 CRAMP1Q96RY5 1269 aa20.23■□□□□ 0.83
SERF1B-208ENST00000515588 METTL22Q9BUU2 404 aaPredicted RBP20.23■□□□□ 0.83
SERF1B-208ENST00000515588 CCDC93Q567U6 631 aa20.22■□□□□ 0.83
SERF1B-208ENST00000515588 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
SERF1B-208ENST00000515588 RBM17Q96I25 401 aaKnown RBP20.22■□□□□ 0.83
SERF1B-208ENST00000515588 TAOK3Q9H2K8 898 aa20.22■□□□□ 0.83
SERF1B-208ENST00000515588 LTBP3Q9NS15 1303 aa20.22■□□□□ 0.83
SERF1B-208ENST00000515588 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
SERF1B-208ENST00000515588 SNED1Q8TER0 1413 aa20.2■□□□□ 0.82
SERF1B-208ENST00000515588 FLIIQ13045 1269 aa20.2■□□□□ 0.82
SERF1B-208ENST00000515588 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
SERF1B-208ENST00000515588 ZBTB38Q8NAP3 1195 aaPredicted RBP20.19■□□□□ 0.82
SERF1B-208ENST00000515588 CCDC191Q8NCU4 936 aa20.19■□□□□ 0.82
SERF1B-208ENST00000515588 ABCC4O15439 1325 aa20.19■□□□□ 0.82
SERF1B-208ENST00000515588 LAMB2P55268 1798 aa20.18■□□□□ 0.82
SERF1B-208ENST00000515588 CCDC88AQ3V6T2 1871 aa20.18■□□□□ 0.82
SERF1B-208ENST00000515588 IRS4O14654 1257 aaPredicted RBP20.18■□□□□ 0.82
SERF1B-208ENST00000515588 SLFN5Q08AF3 891 aa20.18■□□□□ 0.82
SERF1B-208ENST00000515588 RTKN2Q8IZC4 609 aa20.18■□□□□ 0.82
SERF1B-208ENST00000515588 JARID2Q92833 1246 aaPredicted RBP20.18■□□□□ 0.82
SERF1B-208ENST00000515588 CDCA7LQ96GN5 454 aa20.18■□□□□ 0.82
SERF1B-208ENST00000515588 CWC25Q9NXE8 425 aaPredicted RBP20.18■□□□□ 0.82
SERF1B-208ENST00000515588 DDX60Q8IY21 1712 aaKnown RBP20.18■□□□□ 0.82
SERF1B-208ENST00000515588 E9PSI1 815 aa20.17■□□□□ 0.82
SERF1B-208ENST00000515588 KIF3CO14782 793 aa20.17■□□□□ 0.82
SERF1B-208ENST00000515588 PPEF1O14829 653 aaPredicted RBP20.17■□□□□ 0.82
SERF1B-208ENST00000515588 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.82
SERF1B-208ENST00000515588 NMRK2Q9NPI5 230 aa20.17■□□□□ 0.82
SERF1B-208ENST00000515588 ZC3H4Q9UPT8 1303 aaKnown RBP20.17■□□□□ 0.82
SERF1B-208ENST00000515588 PCCAP05165 728 aaPredicted RBP20.16■□□□□ 0.82
SERF1B-208ENST00000515588 FKBP5Q13451 457 aaPredicted RBP20.16■□□□□ 0.82
SERF1B-208ENST00000515588 SF3B3Q15393 1217 aaKnown RBP20.16■□□□□ 0.82
SERF1B-208ENST00000515588 CWF19L2Q2TBE0 894 aaKnown RBP20.16■□□□□ 0.82
SERF1B-208ENST00000515588 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
SERF1B-208ENST00000515588 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
SERF1B-208ENST00000515588 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
SERF1B-208ENST00000515588 CACNA1FO60840 1977 aa20.14■□□□□ 0.81
SERF1B-208ENST00000515588 NEURL1BA8MQ27 555 aa20.14■□□□□ 0.81
SERF1B-208ENST00000515588 DDX46Q7L014 1031 aaKnown RBP20.14■□□□□ 0.81
SERF1B-208ENST00000515588 PSMD1Q99460 953 aa20.14■□□□□ 0.81
SERF1B-208ENST00000515588 ATP6V0A2Q9Y487 856 aa20.14■□□□□ 0.81
SERF1B-208ENST00000515588 TIAM2Q8IVF5 1701 aa20.13■□□□□ 0.81
SERF1B-208ENST00000515588 GLTPD2A6NH11 291 aa20.13■□□□□ 0.81
SERF1B-208ENST00000515588 BBOX1O75936 387 aa20.13■□□□□ 0.81
SERF1B-208ENST00000515588 NEXNQ0ZGT2 675 aa20.13■□□□□ 0.81
SERF1B-208ENST00000515588 GRAPQ13588 217 aa20.13■□□□□ 0.81
SERF1B-208ENST00000515588 TRMT2AQ8IZ69 625 aaKnown RBP20.13■□□□□ 0.81
SERF1B-208ENST00000515588 GRAPLQ8TC17 118 aaPredicted RBP20.13■□□□□ 0.81
SERF1B-208ENST00000515588 DNAAF4Q8WXU2 420 aa20.13■□□□□ 0.81
SERF1B-208ENST00000515588 DICER1Q9UPY3 1922 aaKnown RBP20.13■□□□□ 0.81
SERF1B-208ENST00000515588 COL4A1P02462 1669 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms