RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 NTSR2O95665 410 aa15.14■□□□□ 0.01
SNF8-215ENST00000515572 PDZRN3Q9UPQ7 1066 aa15.14■□□□□ 0.01
SNF8-215ENST00000515572 LAMB2P55268 1798 aa15.13■□□□□ 0.01
SNF8-215ENST00000515572 PDE6BP35913 854 aa15.13■□□□□ 0.01
SNF8-215ENST00000515572 BRCA1P38398 1863 aaKnown RBP15.13■□□□□ 0.01
SNF8-215ENST00000515572 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
SNF8-215ENST00000515572 CWC25Q9NXE8 425 aaPredicted RBP15.13■□□□□ 0.01
SNF8-215ENST00000515572 PXDNLA1KZ92 1463 aa15.13■□□□□ 0.01
SNF8-215ENST00000515572 SH3TC1Q8TE82 1336 aa15.13■□□□□ 0.01
SNF8-215ENST00000515572 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
SNF8-215ENST00000515572 ARHGAP45Q92619 1136 aa15.12■□□□□ 0.01
SNF8-215ENST00000515572 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
SNF8-215ENST00000515572 TRMT112Q9UI30 125 aaKnown RBP15.12■□□□□ 0.01
SNF8-215ENST00000515572 NOB1Q9ULX3 412 aaKnown RBP15.12■□□□□ 0.01
SNF8-215ENST00000515572 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
SNF8-215ENST00000515572 F6X3S4 739 aa15.11■□□□□ 0.01
SNF8-215ENST00000515572 IGKV5-2P06315 115 aa15.11■□□□□ 0.01
SNF8-215ENST00000515572 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
SNF8-215ENST00000515572 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
SNF8-215ENST00000515572 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
SNF8-215ENST00000515572 NLGN2Q8NFZ4 835 aa15.11■□□□□ 0.01
SNF8-215ENST00000515572 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
SNF8-215ENST00000515572 COL11A2P13942 1736 aaPredicted RBP15.11■□□□□ 0.01
SNF8-215ENST00000515572 DDX60Q8IY21 1712 aaKnown RBP15.11■□□□□ 0.01
SNF8-215ENST00000515572 ABCC12Q96J65 1359 aa15.11■□□□□ 0.01
SNF8-215ENST00000515572 H0YIN7 160 aa15.1■□□□□ 0.01
SNF8-215ENST00000515572 BCAR3O75815 825 aa15.1■□□□□ 0.01
SNF8-215ENST00000515572 ALDH1L1O75891 902 aa15.1■□□□□ 0.01
SNF8-215ENST00000515572 HSP90B1P14625 803 aaKnown RBP15.1■□□□□ 0.01
SNF8-215ENST00000515572 CWF19L2Q2TBE0 894 aaKnown RBP15.1■□□□□ 0.01
SNF8-215ENST00000515572 SLC10A5Q5PT55 438 aa15.1■□□□□ 0.01
SNF8-215ENST00000515572 BEND3Q5T5X7 828 aa15.1■□□□□ 0.01
SNF8-215ENST00000515572 PCCAP05165 728 aaPredicted RBP15.09■□□□□ 0.01
SNF8-215ENST00000515572 SLC4A10Q6U841 1118 aa15.09■□□□□ 0.01
SNF8-215ENST00000515572 CCDC24Q8N4L8 307 aa15.09■□□□□ 0.01
SNF8-215ENST00000515572 SRCIN1Q9C0H9 1055 aa15.09■□□□□ 0.01
SNF8-215ENST00000515572 RCAN3Q9UKA8 241 aa15.09■□□□□ 0.01
SNF8-215ENST00000515572 MYH3P11055 1940 aa15.09■□□□□ 0.01
SNF8-215ENST00000515572 A0A0G2JLW4 131 aa15.08■□□□□ 0
SNF8-215ENST00000515572 KLRG2A4D1S0 409 aaPredicted RBP15.08■□□□□ 0
SNF8-215ENST00000515572 DPEP1P16444 411 aa15.08■□□□□ 0
SNF8-215ENST00000515572 GCKRQ14397 625 aa15.08■□□□□ 0
SNF8-215ENST00000515572 C2CD5Q86YS7 1000 aa15.08■□□□□ 0
SNF8-215ENST00000515572 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0
SNF8-215ENST00000515572 FAM89AQ96GI7 184 aa15.08■□□□□ 0
SNF8-215ENST00000515572 NLRP3Q96P20 1036 aa15.08■□□□□ 0
SNF8-215ENST00000515572 SRGNP10124 158 aa15.07■□□□□ 0
SNF8-215ENST00000515572 CCT4P50991 539 aaKnown RBP15.07■□□□□ 0
SNF8-215ENST00000515572 CRY2Q49AN0 593 aa15.07■□□□□ 0
SNF8-215ENST00000515572 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
SNF8-215ENST00000515572 ATF7IPQ6VMQ6 1270 aa15.07■□□□□ 0
SNF8-215ENST00000515572 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
SNF8-215ENST00000515572 CDHR2Q9BYE9 1310 aa15.07■□□□□ 0
SNF8-215ENST00000515572 CACNA1SQ13698 1873 aa15.06■□□□□ 0
SNF8-215ENST00000515572 H7C1W4 665 aa15.06■□□□□ 0
SNF8-215ENST00000515572 IRS4O14654 1257 aaPredicted RBP15.06■□□□□ 0
SNF8-215ENST00000515572 KCNA3P22001 575 aa15.06■□□□□ 0
SNF8-215ENST00000515572 CHRNA5P30532 468 aa15.06■□□□□ 0
SNF8-215ENST00000515572 STYK1Q6J9G0 422 aa15.06■□□□□ 0
SNF8-215ENST00000515572 MASTLQ96GX5 879 aa15.06■□□□□ 0
SNF8-215ENST00000515572 PIM2Q9P1W9 311 aa15.06■□□□□ 0
SNF8-215ENST00000515572 ABCC4O15439 1325 aa15.06■□□□□ 0
SNF8-215ENST00000515572 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
SNF8-215ENST00000515572 HCLS1P14317 486 aaPredicted RBP15.05■□□□□ -0
SNF8-215ENST00000515572 TRIM27P14373 513 aa15.05■□□□□ -0
SNF8-215ENST00000515572 NPR1P16066 1061 aa15.05■□□□□ -0
SNF8-215ENST00000515572 RTL5Q5HYW3 569 aaPredicted RBP15.05■□□□□ -0
SNF8-215ENST00000515572 UBE3BQ7Z3V4 1068 aa15.05■□□□□ -0
SNF8-215ENST00000515572 SYNE4Q8N205 404 aa15.05■□□□□ -0
SNF8-215ENST00000515572 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
SNF8-215ENST00000515572 CNKSR1Q969H4 720 aa15.05■□□□□ -0
SNF8-215ENST00000515572 GRM8O00222 908 aa15.04■□□□□ -0
SNF8-215ENST00000515572 PDE8AO60658 829 aa15.04■□□□□ -0
SNF8-215ENST00000515572 HOXA10P31260 410 aaPredicted RBP15.04■□□□□ -0
SNF8-215ENST00000515572 ZNF622Q969S3 477 aaKnown RBP eCLIP15.04■□□□□ -0
SNF8-215ENST00000515572 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
SNF8-215ENST00000515572 SRCAPQ6ZRS2 3230 aa15.04■□□□□ -0
SNF8-215ENST00000515572 ALDH1B1P30837 517 aa15.03■□□□□ -0
SNF8-215ENST00000515572 SF3B3Q15393 1217 aaKnown RBP15.03■□□□□ -0
SNF8-215ENST00000515572 INTS3Q68E01 1043 aaKnown RBP15.03■□□□□ -0
SNF8-215ENST00000515572 TTLL6Q8N841 843 aa15.03■□□□□ -0
SNF8-215ENST00000515572 UTYO14607 1347 aa15.02■□□□□ -0
SNF8-215ENST00000515572 MS4A1P11836 297 aa15.02■□□□□ -0
SNF8-215ENST00000515572 CASP7P55210 303 aa15.02■□□□□ -0
SNF8-215ENST00000515572 DALRD3Q5D0E6 543 aaKnown RBP15.02■□□□□ -0
SNF8-215ENST00000515572 PLA2G12BQ9BX93 195 aa15.02■□□□□ -0
SNF8-215ENST00000515572 SLX4Q8IY92 1834 aa15.01□□□□□ -0.01
SNF8-215ENST00000515572 GPR162Q16538 588 aa15.01□□□□□ -0.01
SNF8-215ENST00000515572 C3orf67Q6ZVT6 689 aa15.01□□□□□ -0.01
SNF8-215ENST00000515572 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
SNF8-215ENST00000515572 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.01□□□□□ -0.01
SNF8-215ENST00000515572 JARID2Q92833 1246 aaPredicted RBP15.01□□□□□ -0.01
SNF8-215ENST00000515572 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
SNF8-215ENST00000515572 CRAMP1Q96RY5 1269 aa15.01□□□□□ -0.01
SNF8-215ENST00000515572 HDAC5Q9UQL6 1122 aa15.01□□□□□ -0.01
SNF8-215ENST00000515572 BCS1LQ9Y276 419 aa15.01□□□□□ -0.01
SNF8-215ENST00000515572 GRIN3BO60391 1043 aa15□□□□□ -0.01
SNF8-215ENST00000515572 CTSWP56202 376 aa15□□□□□ -0.01
SNF8-215ENST00000515572 CCDC152Q4G0S7 254 aa15□□□□□ -0.01
SNF8-215ENST00000515572 PRPF40BQ6NWY9 871 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms