RNA–Protein interactions for RNA: ENST00000515442.1

RUFY3-214, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-214ENST00000515442 IGHA2P01877 340 aa7.45□□□□□ -1.22
RUFY3-214ENST00000515442 EPB42P16452 691 aa7.45□□□□□ -1.22
RUFY3-214ENST00000515442 ATP2B2Q01814 1243 aa7.45□□□□□ -1.22
RUFY3-214ENST00000515442 TAGLNQ01995 201 aaKnown RBP7.45□□□□□ -1.22
RUFY3-214ENST00000515442 KLRG1Q96E93 195 aa7.45□□□□□ -1.22
RUFY3-214ENST00000515442 GAS2L1Q99501 681 aaPredicted RBP7.45□□□□□ -1.22
RUFY3-214ENST00000515442 IGSF3O75054 1194 aa7.44□□□□□ -1.22
RUFY3-214ENST00000515442 LDHBP07195 334 aaKnown RBP7.44□□□□□ -1.22
RUFY3-214ENST00000515442 INPP5BP32019 993 aa7.44□□□□□ -1.22
RUFY3-214ENST00000515442 EFHC2Q5JST6 749 aa7.44□□□□□ -1.22
RUFY3-214ENST00000515442 NLRP8Q86W28 1048 aa7.44□□□□□ -1.22
RUFY3-214ENST00000515442 CMTR1Q8N1G2 835 aaKnown RBP7.44□□□□□ -1.22
RUFY3-214ENST00000515442 CEP63Q96MT8 703 aa7.44□□□□□ -1.22
RUFY3-214ENST00000515442 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
RUFY3-214ENST00000515442 RUBCNLQ9H714 662 aa7.44□□□□□ -1.22
RUFY3-214ENST00000515442 ATP13A2Q9NQ11 1180 aa7.44□□□□□ -1.22
RUFY3-214ENST00000515442 RTCBQ9Y3I0 505 aaKnown RBP7.44□□□□□ -1.22
RUFY3-214ENST00000515442 ITGAEP38570 1179 aa7.43□□□□□ -1.22
RUFY3-214ENST00000515442 GGNBP2Q9H3C7 697 aa7.43□□□□□ -1.22
RUFY3-214ENST00000515442 KIAA1522Q9P206 1035 aaPredicted RBP7.43□□□□□ -1.22
RUFY3-214ENST00000515442 UBAP1LF5GYI3 381 aa7.42□□□□□ -1.22
RUFY3-214ENST00000515442 PRPF40AO75400 957 aaKnown RBP7.42□□□□□ -1.22
RUFY3-214ENST00000515442 XPCQ01831 940 aaPredicted RBP7.42□□□□□ -1.22
RUFY3-214ENST00000515442 ALG1LQ6GMV1 187 aa7.42□□□□□ -1.22
RUFY3-214ENST00000515442 AAASQ9NRG9 546 aa7.42□□□□□ -1.22
RUFY3-214ENST00000515442 PNMA6FA0A0J9YX94 578 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 A6NHS1 94 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 VAMP1P23763 118 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 TYRO3Q06418 890 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 LBRQ14739 615 aaKnown RBP7.41□□□□□ -1.22
RUFY3-214ENST00000515442 ENOX2Q16206 610 aaKnown RBP7.41□□□□□ -1.22
RUFY3-214ENST00000515442 SAMD5Q5TGI4 173 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 FIGNL1Q6PIW4 674 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 RIPOR1Q6ZS17 1223 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 ZNF438Q7Z4V0 828 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 USP20Q9Y2K6 914 aa7.41□□□□□ -1.22
RUFY3-214ENST00000515442 PDE12Q6L8Q7 609 aaKnown RBP7.4□□□□□ -1.22
RUFY3-214ENST00000515442 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
RUFY3-214ENST00000515442 CSRNP1Q96S65 589 aa7.4□□□□□ -1.22
RUFY3-214ENST00000515442 DUSP9Q99956 384 aaKnown RBP7.4□□□□□ -1.22
RUFY3-214ENST00000515442 SENP2Q9HC62 589 aa7.4□□□□□ -1.22
RUFY3-214ENST00000515442 MRS2Q9HD23 443 aa7.4□□□□□ -1.22
RUFY3-214ENST00000515442 BRD7Q9NPI1 651 aa7.4□□□□□ -1.22
RUFY3-214ENST00000515442 H7C1W4 665 aa7.39□□□□□ -1.23
RUFY3-214ENST00000515442 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
RUFY3-214ENST00000515442 PTSQ03393 145 aa7.39□□□□□ -1.23
RUFY3-214ENST00000515442 KIFC2Q96AC6 838 aa7.39□□□□□ -1.23
RUFY3-214ENST00000515442 DNAJC25Q9H1X3 360 aa7.39□□□□□ -1.23
RUFY3-214ENST00000515442 C11orf16Q9NQ32 467 aa7.39□□□□□ -1.23
RUFY3-214ENST00000515442 PARP2Q9UGN5 583 aa7.39□□□□□ -1.23
RUFY3-214ENST00000515442 WWC3Q9ULE0 1092 aa7.39□□□□□ -1.23
RUFY3-214ENST00000515442 KCNMB2Q9Y691 235 aa7.39□□□□□ -1.23
RUFY3-214ENST00000515442 SENP3-EIF4A1A0A087X0R7 540 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 SOBPA7XYQ1 873 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 EIF1AYO14602 144 aaKnown RBP7.38□□□□□ -1.23
RUFY3-214ENST00000515442 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
RUFY3-214ENST00000515442 XYLBO75191 536 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 TNFRSF21O75509 655 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 PSMD2Q13200 908 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 ORC1Q13415 861 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 TRIP4Q15650 581 aaPredicted RBP7.38□□□□□ -1.23
RUFY3-214ENST00000515442 SNX29Q8TEQ0 813 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 FBF1Q8TES7 1133 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 ZCCHC2Q9C0B9 1178 aaKnown RBP7.38□□□□□ -1.23
RUFY3-214ENST00000515442 NUCKS1Q9H1E3 243 aaKnown RBP7.38□□□□□ -1.23
RUFY3-214ENST00000515442 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
RUFY3-214ENST00000515442 SLC35F4A4IF30 521 aa7.37□□□□□ -1.23
RUFY3-214ENST00000515442 HSP90B1P14625 803 aaKnown RBP7.37□□□□□ -1.23
RUFY3-214ENST00000515442 DACH1Q9UI36 760 aa7.37□□□□□ -1.23
RUFY3-214ENST00000515442 KCNH4Q9UQ05 1017 aa7.37□□□□□ -1.23
RUFY3-214ENST00000515442 PCDHGC4Q9Y5F7 938 aa7.37□□□□□ -1.23
RUFY3-214ENST00000515442 SORBS3O60504 671 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 PHACTR2O75167 634 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 EGFRP00533 1210 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 FAM157BP0CG42 384 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 KCNQ4P56696 695 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 DAB2P98082 770 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 TMC4Q7Z404 712 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 FRMD6Q96NE9 622 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 SETDB2Q96T68 719 aa7.36□□□□□ -1.23
RUFY3-214ENST00000515442 IRX2Q9BZI1 471 aaPredicted RBP7.36□□□□□ -1.23
RUFY3-214ENST00000515442 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
RUFY3-214ENST00000515442 TCF3P15923 654 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 GRNP28799 593 aaKnown RBP7.35□□□□□ -1.23
RUFY3-214ENST00000515442 LAMC2Q13753 1193 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 TSNAXIP1Q2TAA8 658 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 TTC39BQ5VTQ0 682 aaPredicted RBP7.35□□□□□ -1.23
RUFY3-214ENST00000515442 NLRP13Q86W25 1043 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 CCDC155Q8N6L0 562 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 GMCL1Q96IK5 515 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 ZFYVE28Q9HCC9 887 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 TMEM63CQ9P1W3 806 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 VTI1BQ9UEU0 232 aa7.35□□□□□ -1.23
RUFY3-214ENST00000515442 FOXD3Q9UJU5 478 aaPredicted RBP7.35□□□□□ -1.23
RUFY3-214ENST00000515442 DCDC2BA2VCK2 349 aa7.34□□□□□ -1.23
RUFY3-214ENST00000515442 GNA15P30679 374 aa7.34□□□□□ -1.23
RUFY3-214ENST00000515442 CCINQ13939 588 aa7.34□□□□□ -1.23
RUFY3-214ENST00000515442 MRPL58Q14197 206 aaKnown RBP7.34□□□□□ -1.23
RUFY3-214ENST00000515442 TRIM22Q8IYM9 498 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms