RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 FBF1Q8TES7 1133 aa15.3■□□□□ 0.04
TCOF1-214ENST00000515035 USP5P45974 858 aa15.29■□□□□ 0.04
TCOF1-214ENST00000515035 TMX3Q96JJ7 454 aa15.29■□□□□ 0.04
TCOF1-214ENST00000515035 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-214ENST00000515035 GOLGA8BA8MQT2 603 aa15.29■□□□□ 0.04
TCOF1-214ENST00000515035 ANO6Q4KMQ2 910 aa15.29■□□□□ 0.04
TCOF1-214ENST00000515035 ATRIPQ8WXE1 791 aa15.29■□□□□ 0.04
TCOF1-214ENST00000515035 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-214ENST00000515035 SRRTQ9BXP5 876 aaKnown RBP15.28■□□□□ 0.04
TCOF1-214ENST00000515035 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
TCOF1-214ENST00000515035 UBASH3AP57075 661 aa15.28■□□□□ 0.04
TCOF1-214ENST00000515035 CKAP4Q07065 602 aaKnown RBP15.28■□□□□ 0.04
TCOF1-214ENST00000515035 TMOD3Q9NYL9 352 aa15.28■□□□□ 0.04
TCOF1-214ENST00000515035 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
TCOF1-214ENST00000515035 ABCC11Q96J66 1382 aa15.28■□□□□ 0.04
TCOF1-214ENST00000515035 NOS1P29475 1434 aa15.28■□□□□ 0.04
TCOF1-214ENST00000515035 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
TCOF1-214ENST00000515035 CCDC102BQ68D86 513 aa15.28■□□□□ 0.04
TCOF1-214ENST00000515035 PRPF4BQ13523 1007 aaKnown RBP15.28■□□□□ 0.04
TCOF1-214ENST00000515035 C6orf163Q5TEZ5 329 aa15.28■□□□□ 0.04
TCOF1-214ENST00000515035 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
TCOF1-214ENST00000515035 ANAPC15P60006 121 aa15.27■□□□□ 0.04
TCOF1-214ENST00000515035 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.04
TCOF1-214ENST00000515035 CCDC85AQ96PX6 553 aaPredicted RBP15.27■□□□□ 0.04
TCOF1-214ENST00000515035 ATP10BO94823 1461 aa15.27■□□□□ 0.03
TCOF1-214ENST00000515035 NOP2P46087 812 aaKnown RBP15.27■□□□□ 0.03
TCOF1-214ENST00000515035 TTC31Q49AM3 519 aaPredicted RBP15.27■□□□□ 0.03
TCOF1-214ENST00000515035 UBA5Q9GZZ9 404 aa15.27■□□□□ 0.03
TCOF1-214ENST00000515035 CCDC8Q9H0W5 538 aaPredicted RBP15.27■□□□□ 0.03
TCOF1-214ENST00000515035 FSD2A1L4K1 749 aa15.27■□□□□ 0.03
TCOF1-214ENST00000515035 EBAG9O00559 213 aa15.27■□□□□ 0.03
TCOF1-214ENST00000515035 N4BP3O15049 544 aa15.27■□□□□ 0.03
TCOF1-214ENST00000515035 ADAMTS2O95450 1211 aa15.27■□□□□ 0.03
TCOF1-214ENST00000515035 NGLY1Q96IV0 654 aa15.27■□□□□ 0.03
TCOF1-214ENST00000515035 NAPBQ9H115 298 aa15.27■□□□□ 0.03
TCOF1-214ENST00000515035 NEBLO76041 1014 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 IFIT1P09914 478 aaKnown RBP15.26■□□□□ 0.03
TCOF1-214ENST00000515035 KRT28Q7Z3Y7 464 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 SPATA24Q86W54 205 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 NME9Q86XW9 330 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 SLC12A7Q9Y666 1083 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 RAPGEF6Q8TEU7 1601 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 USP48Q86UV5 1035 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 SMAP1Q8IYB5 467 aaPredicted RBP15.26■□□□□ 0.03
TCOF1-214ENST00000515035 CTCFLQ8NI51 663 aaPredicted RBP15.26■□□□□ 0.03
TCOF1-214ENST00000515035 ABCF2Q9UG63 623 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 ZNF652Q9Y2D9 606 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 TUBB4AP04350 444 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 POLR3DP05423 398 aaPredicted RBP15.26■□□□□ 0.03
TCOF1-214ENST00000515035 MCM10Q7L590 875 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 CEP57Q86XR8 500 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 C10orf67Q8IYJ2 551 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 FEZ1Q99689 392 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 CNPY2Q9Y2B0 182 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 WDR7Q9Y4E6 1490 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 F6X3S4 739 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 AKR1B10O60218 316 aa15.26■□□□□ 0.03
TCOF1-214ENST00000515035 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
TCOF1-214ENST00000515035 MINDY4BA8MYZ0 360 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 KIF20AO95235 890 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 RAB34Q9BZG1 259 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 GOLGA8AA7E2F4 631 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 MYO1BO43795 1136 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 OGFRQ9NZT2 677 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 RPRD2Q5VT52 1461 aaKnown RBP15.25■□□□□ 0.03
TCOF1-214ENST00000515035 ZNF213O14771 459 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 SSRP1Q08945 709 aaKnown RBP15.25■□□□□ 0.03
TCOF1-214ENST00000515035 CCDC6Q16204 474 aa15.25■□□□□ 0.03
TCOF1-214ENST00000515035 ZSCAN16Q9H4T2 348 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-214ENST00000515035 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
TCOF1-214ENST00000515035 SEC63Q9UGP8 760 aaKnown RBP15.24■□□□□ 0.03
TCOF1-214ENST00000515035 KANK3Q6NY19 840 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 RASSF4Q9H2L5 321 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 HYPKQ9NX55 129 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 USP16Q9Y5T5 823 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 SCAF11Q99590 1463 aaKnown RBP15.24■□□□□ 0.03
TCOF1-214ENST00000515035 OPA1O60313 960 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 METTL24Q5JXM2 366 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 MSL1Q68DK7 614 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 GOLGA1Q92805 767 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 CCDC194A0A1B0GVG4 234 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 OTUD6BQ8N6M0 293 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 DNAJC25Q9H1X3 360 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 DACT1Q9NYF0 836 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 AKAP2Q9Y2D5 859 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 UHRF1BP1LA0JNW5 1464 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 A2MP01023 1474 aa15.24■□□□□ 0.03
TCOF1-214ENST00000515035 MSH6P52701 1360 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 CCDC40Q4G0X9 1142 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 EVI5LQ96CN4 794 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 ECHDC1Q9NTX5 307 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 VPS18Q9P253 973 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 PPM1EQ8WY54 764 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 CCDC96Q2M329 555 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 FAM114A1Q8IWE2 563 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 CCDC155Q8N6L0 562 aa15.23■□□□□ 0.03
TCOF1-214ENST00000515035 NSRP1Q9H0G5 558 aaKnown RBP15.23■□□□□ 0.03
TCOF1-214ENST00000515035 IFIT3O14879 490 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms