RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
LDHBP3-201ENST00000514909 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.53
LDHBP3-201ENST00000514909 XKR5Q6UX68 686 aa11.71□□□□□ -0.53
LDHBP3-201ENST00000514909 GMLQ99445 158 aa11.71□□□□□ -0.53
LDHBP3-201ENST00000514909 TANGO6Q9C0B7 1094 aa11.71□□□□□ -0.53
LDHBP3-201ENST00000514909 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.71□□□□□ -0.53
LDHBP3-201ENST00000514909 PTPN12Q05209 780 aaKnown RBP11.7□□□□□ -0.54
LDHBP3-201ENST00000514909 NBPF1Q3BBV0 1214 aa11.7□□□□□ -0.54
LDHBP3-201ENST00000514909 C8orf34Q49A92 452 aa11.7□□□□□ -0.54
LDHBP3-201ENST00000514909 SNIP1Q8TAD8 396 aaKnown RBP11.7□□□□□ -0.54
LDHBP3-201ENST00000514909 RHPN1Q8TCX5 695 aa11.7□□□□□ -0.54
LDHBP3-201ENST00000514909 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
LDHBP3-201ENST00000514909 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
LDHBP3-201ENST00000514909 RELBQ01201 579 aa11.69□□□□□ -0.54
LDHBP3-201ENST00000514909 CAPN10Q9HC96 672 aa11.69□□□□□ -0.54
LDHBP3-201ENST00000514909 DMGDHQ9UI17 866 aaKnown RBP11.69□□□□□ -0.54
LDHBP3-201ENST00000514909 OPLAHO14841 1288 aa11.68□□□□□ -0.54
LDHBP3-201ENST00000514909 RNF144AP50876 292 aaPredicted RBP11.68□□□□□ -0.54
LDHBP3-201ENST00000514909 WDR4P57081 412 aaKnown RBP11.68□□□□□ -0.54
LDHBP3-201ENST00000514909 ACBD3Q9H3P7 528 aa11.68□□□□□ -0.54
LDHBP3-201ENST00000514909 TIMP2P16035 220 aa11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 PLA2G4AP47712 749 aa11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 MEIOBQ8N635 442 aa11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 C12orf49Q9H741 205 aa11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 CUEDC1Q9NWM3 386 aaPredicted RBP11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 PRKAG2Q9UGJ0 569 aa11.67□□□□□ -0.54
LDHBP3-201ENST00000514909 SPATA31C2B4DYI2 1134 aa11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 PDE12Q6L8Q7 609 aaKnown RBP11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 ZNF654Q8IZM8 581 aa11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 SNX29Q8TEQ0 813 aa11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 SUSD3Q96L08 255 aa11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 ZNF395Q9H8N7 513 aaPredicted RBP11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 AAASQ9NRG9 546 aa11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 DDX41Q9UJV9 622 aaKnown RBP11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 FNDC3AQ9Y2H6 1198 aaKnown RBP11.66□□□□□ -0.54
LDHBP3-201ENST00000514909 TNFRSF21O75509 655 aa11.65□□□□□ -0.54
LDHBP3-201ENST00000514909 SLC27A3Q5K4L6 730 aa11.65□□□□□ -0.54
LDHBP3-201ENST00000514909 ANKIB1Q9P2G1 1089 aa11.65□□□□□ -0.54
LDHBP3-201ENST00000514909 A6NHS1 94 aa11.64□□□□□ -0.55
LDHBP3-201ENST00000514909 TATP17735 454 aaPredicted RBP11.64□□□□□ -0.55
LDHBP3-201ENST00000514909 ATP2B1P20020 1258 aa11.64□□□□□ -0.55
LDHBP3-201ENST00000514909 ARSDP51689 593 aa11.64□□□□□ -0.55
LDHBP3-201ENST00000514909 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.64□□□□□ -0.55
LDHBP3-201ENST00000514909 SRCIN1Q9C0H9 1055 aa11.64□□□□□ -0.55
LDHBP3-201ENST00000514909 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
LDHBP3-201ENST00000514909 IDH3AP50213 366 aa11.63□□□□□ -0.55
LDHBP3-201ENST00000514909 ST13P50502 369 aaKnown RBP11.63□□□□□ -0.55
LDHBP3-201ENST00000514909 FOXC1Q12948 553 aa11.63□□□□□ -0.55
LDHBP3-201ENST00000514909 DPH6Q7L8W6 267 aa11.63□□□□□ -0.55
LDHBP3-201ENST00000514909 HS2ST1Q7LGA3 356 aa11.63□□□□□ -0.55
LDHBP3-201ENST00000514909 CCDC74AQ96AQ1 378 aa11.63□□□□□ -0.55
LDHBP3-201ENST00000514909 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
LDHBP3-201ENST00000514909 INPP5BP32019 993 aa11.62□□□□□ -0.55
LDHBP3-201ENST00000514909 ZFYVE28Q9HCC9 887 aa11.62□□□□□ -0.55
LDHBP3-201ENST00000514909 TOR4AQ9NXH8 423 aa11.62□□□□□ -0.55
LDHBP3-201ENST00000514909 FAM8A1Q9UBU6 413 aa11.62□□□□□ -0.55
LDHBP3-201ENST00000514909 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
LDHBP3-201ENST00000514909 WDR44Q5JSH3 913 aa11.61□□□□□ -0.55
LDHBP3-201ENST00000514909 USP48Q86UV5 1035 aa11.61□□□□□ -0.55
LDHBP3-201ENST00000514909 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
LDHBP3-201ENST00000514909 OSBPL7Q9BZF2 842 aa11.61□□□□□ -0.55
LDHBP3-201ENST00000514909 SPINT1O43278 529 aa11.6□□□□□ -0.55
LDHBP3-201ENST00000514909 TNNI2P48788 182 aa11.6□□□□□ -0.55
LDHBP3-201ENST00000514909 RACK1P63244 317 aaKnown RBP11.6□□□□□ -0.55
LDHBP3-201ENST00000514909 ZNF438Q7Z4V0 828 aa11.6□□□□□ -0.55
LDHBP3-201ENST00000514909 CRIPAKQ8N1N5 446 aa11.6□□□□□ -0.55
LDHBP3-201ENST00000514909 SRA1Q9HD15 236 aaKnown RBP11.6□□□□□ -0.55
LDHBP3-201ENST00000514909 FOXD3Q9UJU5 478 aaPredicted RBP11.6□□□□□ -0.55
LDHBP3-201ENST00000514909 INPP5FQ9Y2H2 1132 aa11.6□□□□□ -0.55
LDHBP3-201ENST00000514909 ARID5AQ03989 594 aa11.59□□□□□ -0.55
LDHBP3-201ENST00000514909 TAF1CQ15572 869 aaPredicted RBP11.59□□□□□ -0.55
LDHBP3-201ENST00000514909 ZNF394Q53GI3 561 aa11.59□□□□□ -0.55
LDHBP3-201ENST00000514909 LCE2AQ5TA79 106 aaPredicted RBP11.59□□□□□ -0.55
LDHBP3-201ENST00000514909 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
LDHBP3-201ENST00000514909 NOP9Q86U38 636 aaKnown RBP11.59□□□□□ -0.55
LDHBP3-201ENST00000514909 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
LDHBP3-201ENST00000514909 RTCBQ9Y3I0 505 aaKnown RBP11.59□□□□□ -0.55
LDHBP3-201ENST00000514909 AVPP01185 164 aa11.58□□□□□ -0.56
LDHBP3-201ENST00000514909 ATP4AP20648 1035 aa11.58□□□□□ -0.56
LDHBP3-201ENST00000514909 TRIP4Q15650 581 aaPredicted RBP11.58□□□□□ -0.56
LDHBP3-201ENST00000514909 BTLAQ7Z6A9 289 aa11.58□□□□□ -0.56
LDHBP3-201ENST00000514909 AIDAQ96BJ3 306 aa11.58□□□□□ -0.56
LDHBP3-201ENST00000514909 HSH2DQ96JZ2 352 aa11.58□□□□□ -0.56
LDHBP3-201ENST00000514909 C11orf16Q9NQ32 467 aa11.58□□□□□ -0.56
LDHBP3-201ENST00000514909 KCNMB2Q9Y691 235 aa11.58□□□□□ -0.56
LDHBP3-201ENST00000514909 J3QL48 77 aa11.57□□□□□ -0.56
LDHBP3-201ENST00000514909 PHACTR2O75167 634 aa11.57□□□□□ -0.56
LDHBP3-201ENST00000514909 EPS8L3Q8TE67 593 aaKnown RBP11.57□□□□□ -0.56
LDHBP3-201ENST00000514909 INSM2Q96T92 566 aaPredicted RBP11.57□□□□□ -0.56
LDHBP3-201ENST00000514909 DNAJC2Q99543 621 aaKnown RBP11.57□□□□□ -0.56
LDHBP3-201ENST00000514909 LNPKQ9C0E8 428 aa11.57□□□□□ -0.56
LDHBP3-201ENST00000514909 DACH1Q9UI36 760 aa11.57□□□□□ -0.56
LDHBP3-201ENST00000514909 GGT7Q9UJ14 662 aa11.57□□□□□ -0.56
LDHBP3-201ENST00000514909 TTC24A2A3L6 582 aaPredicted RBP11.56□□□□□ -0.56
LDHBP3-201ENST00000514909 UBAP1LF5GYI3 381 aa11.56□□□□□ -0.56
LDHBP3-201ENST00000514909 DNAJA1P31689 397 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms