RNA–Protein interactions for RNA: ENST00000514773.1

PCDH1-207, Transcript of protocadherin 1, humanhuman

TSL 4

Gene PCDH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-207ENST00000514773 CCDC191Q8NCU4 936 aa22.88■■□□□ 1.25
PCDH1-207ENST00000514773 SH3TC1Q8TE82 1336 aa22.87■■□□□ 1.25
PCDH1-207ENST00000514773 UTRNP46939 3433 aa22.87■■□□□ 1.25
PCDH1-207ENST00000514773 N4BP2Q86UW6 1770 aaPredicted RBP22.87■■□□□ 1.25
PCDH1-207ENST00000514773 ATP5J2-PTCD1G3V325 749 aa22.87■■□□□ 1.25
PCDH1-207ENST00000514773 HSP90B1P14625 803 aaKnown RBP22.87■■□□□ 1.25
PCDH1-207ENST00000514773 CHRNA5P30532 468 aa22.87■■□□□ 1.25
PCDH1-207ENST00000514773 ERFEQ4G0M1 354 aa22.87■■□□□ 1.25
PCDH1-207ENST00000514773 DALRD3Q5D0E6 543 aaKnown RBP22.87■■□□□ 1.25
PCDH1-207ENST00000514773 NUTM1Q86Y26 1132 aa22.87■■□□□ 1.25
PCDH1-207ENST00000514773 RIC1Q4ADV7 1423 aa22.86■■□□□ 1.25
PCDH1-207ENST00000514773 KLRG2A4D1S0 409 aaPredicted RBP22.86■■□□□ 1.25
PCDH1-207ENST00000514773 KCNA3P22001 575 aa22.86■■□□□ 1.25
PCDH1-207ENST00000514773 DNAAF4Q8WXU2 420 aa22.86■■□□□ 1.25
PCDH1-207ENST00000514773 SSH1Q8WYL5 1049 aa22.86■■□□□ 1.25
PCDH1-207ENST00000514773 CWC25Q9NXE8 425 aaPredicted RBP22.86■■□□□ 1.25
PCDH1-207ENST00000514773 ADCY9O60503 1353 aa22.86■■□□□ 1.25
PCDH1-207ENST00000514773 SLC10A5Q5PT55 438 aa22.85■■□□□ 1.25
PCDH1-207ENST00000514773 MRPL50Q8N5N7 158 aaKnown RBP22.85■■□□□ 1.25
PCDH1-207ENST00000514773 MASTLQ96GX5 879 aa22.85■■□□□ 1.25
PCDH1-207ENST00000514773 SMC4Q9NTJ3 1288 aa22.85■■□□□ 1.25
PCDH1-207ENST00000514773 BCS1LQ9Y276 419 aa22.85■■□□□ 1.25
PCDH1-207ENST00000514773 KIAA1551Q9HCM1 1747 aa22.85■■□□□ 1.25
PCDH1-207ENST00000514773 PTPRCP08575 1304 aa22.84■■□□□ 1.25
PCDH1-207ENST00000514773 STYK1Q6J9G0 422 aa22.84■■□□□ 1.25
PCDH1-207ENST00000514773 TTLL6Q8N841 843 aa22.84■■□□□ 1.25
PCDH1-207ENST00000514773 CNKSR1Q969H4 720 aa22.84■■□□□ 1.25
PCDH1-207ENST00000514773 ZNF622Q969S3 477 aaKnown RBP eCLIP22.84■■□□□ 1.25
PCDH1-207ENST00000514773 NLRP3Q96P20 1036 aa22.84■■□□□ 1.25
PCDH1-207ENST00000514773 SRGNP10124 158 aa22.83■■□□□ 1.25
PCDH1-207ENST00000514773 NPR1P16066 1061 aa22.83■■□□□ 1.25
PCDH1-207ENST00000514773 ZBTB38Q8NAP3 1195 aaPredicted RBP22.83■■□□□ 1.25
PCDH1-207ENST00000514773 ANKRD31Q8N7Z5 1873 aa22.83■■□□□ 1.24
PCDH1-207ENST00000514773 LINS1Q8NG48 757 aa22.82■■□□□ 1.24
PCDH1-207ENST00000514773 ABCC12Q96J65 1359 aa22.81■■□□□ 1.24
PCDH1-207ENST00000514773 YBX3P16989 372 aaKnown RBP eCLIP22.81■■□□□ 1.24
PCDH1-207ENST00000514773 ALDH1B1P30837 517 aa22.81■■□□□ 1.24
PCDH1-207ENST00000514773 CRY2Q49AN0 593 aa22.81■■□□□ 1.24
PCDH1-207ENST00000514773 RPGRQ92834 1020 aaKnown RBP22.81■■□□□ 1.24
PCDH1-207ENST00000514773 WWC3Q9ULE0 1092 aa22.81■■□□□ 1.24
PCDH1-207ENST00000514773 PCCAP05165 728 aaPredicted RBP22.8■■□□□ 1.24
PCDH1-207ENST00000514773 RARSP54136 660 aaKnown RBP22.8■■□□□ 1.24
PCDH1-207ENST00000514773 BRPF1P55201 1214 aaPredicted RBP22.8■■□□□ 1.24
PCDH1-207ENST00000514773 FAM89AQ96GI7 184 aa22.8■■□□□ 1.24
PCDH1-207ENST00000514773 BCL2L13Q9BXK5 485 aa22.8■■□□□ 1.24
PCDH1-207ENST00000514773 DLEC1Q9Y238 1755 aa22.8■■□□□ 1.24
PCDH1-207ENST00000514773 NEURL1BA8MQ27 555 aa22.79■■□□□ 1.24
PCDH1-207ENST00000514773 IGKV5-2P06315 115 aa22.79■■□□□ 1.24
PCDH1-207ENST00000514773 BRCA1P38398 1863 aaKnown RBP22.79■■□□□ 1.24
PCDH1-207ENST00000514773 RBM17Q96I25 401 aaKnown RBP22.78■■□□□ 1.24
PCDH1-207ENST00000514773 KIF16BQ96L93 1317 aa22.78■■□□□ 1.24
PCDH1-207ENST00000514773 F6X3S4 739 aa22.77■■□□□ 1.24
PCDH1-207ENST00000514773 IRS4O14654 1257 aaPredicted RBP22.77■■□□□ 1.24
PCDH1-207ENST00000514773 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
PCDH1-207ENST00000514773 CWF19L2Q2TBE0 894 aaKnown RBP22.77■■□□□ 1.24
PCDH1-207ENST00000514773 HOXA10P31260 410 aaPredicted RBP22.76■■□□□ 1.23
PCDH1-207ENST00000514773 GCKRQ14397 625 aa22.76■■□□□ 1.23
PCDH1-207ENST00000514773 SOGA3Q5TF21 947 aa22.76■■□□□ 1.23
PCDH1-207ENST00000514773 SLC4A10Q6U841 1118 aa22.76■■□□□ 1.23
PCDH1-207ENST00000514773 COL11A2P13942 1736 aaPredicted RBP22.75■■□□□ 1.23
PCDH1-207ENST00000514773 IPO8O15397 1037 aaKnown RBP22.75■■□□□ 1.23
PCDH1-207ENST00000514773 RTL5Q5HYW3 569 aaPredicted RBP22.75■■□□□ 1.23
PCDH1-207ENST00000514773 BEND3Q5T5X7 828 aa22.75■■□□□ 1.23
PCDH1-207ENST00000514773 SYNE4Q8N205 404 aa22.75■■□□□ 1.23
PCDH1-207ENST00000514773 SRCIN1Q9C0H9 1055 aa22.75■■□□□ 1.23
PCDH1-207ENST00000514773 ARFGEF1Q9Y6D6 1849 aa22.74■■□□□ 1.23
PCDH1-207ENST00000514773 ALDH1L1O75891 902 aa22.74■■□□□ 1.23
PCDH1-207ENST00000514773 PRPF40BQ6NWY9 871 aaKnown RBP22.74■■□□□ 1.23
PCDH1-207ENST00000514773 ARHGAP45Q92619 1136 aa22.74■■□□□ 1.23
PCDH1-207ENST00000514773 CRAMP1Q96RY5 1269 aa22.74■■□□□ 1.23
PCDH1-207ENST00000514773 API5Q9BZZ5 524 aaKnown RBP22.74■■□□□ 1.23
PCDH1-207ENST00000514773 NOB1Q9ULX3 412 aaKnown RBP22.74■■□□□ 1.23
PCDH1-207ENST00000514773 CDHR2Q9BYE9 1310 aa22.74■■□□□ 1.23
PCDH1-207ENST00000514773 ARHGAP27Q6ZUM4 889 aa22.73■■□□□ 1.23
PCDH1-207ENST00000514773 DDX46Q7L014 1031 aaKnown RBP22.73■■□□□ 1.23
PCDH1-207ENST00000514773 TMX4Q9H1E5 349 aaPredicted RBP22.73■■□□□ 1.23
PCDH1-207ENST00000514773 TNRC6CQ9HCJ0 1690 aaKnown RBP22.73■■□□□ 1.23
PCDH1-207ENST00000514773 H7C1W4 665 aa22.72■■□□□ 1.23
PCDH1-207ENST00000514773 PDE8AO60658 829 aa22.72■■□□□ 1.23
PCDH1-207ENST00000514773 SF3B3Q15393 1217 aaKnown RBP22.72■■□□□ 1.23
PCDH1-207ENST00000514773 UBE3BQ7Z3V4 1068 aa22.71■■□□□ 1.23
PCDH1-207ENST00000514773 C9orf78Q9NZ63 289 aaPredicted RBP22.71■■□□□ 1.23
PCDH1-207ENST00000514773 C21orf2O43822 256 aa22.7■■□□□ 1.22
PCDH1-207ENST00000514773 CCDC152Q4G0S7 254 aa22.7■■□□□ 1.22
PCDH1-207ENST00000514773 C3orf67Q6ZVT6 689 aa22.7■■□□□ 1.22
PCDH1-207ENST00000514773 BBOX1O75936 387 aa22.69■■□□□ 1.22
PCDH1-207ENST00000514773 GRIPAP1Q4V328 841 aa22.69■■□□□ 1.22
PCDH1-207ENST00000514773 LAMB2P55268 1798 aa22.68■■□□□ 1.22
PCDH1-207ENST00000514773 DDX60Q8IY21 1712 aaKnown RBP22.68■■□□□ 1.22
PCDH1-207ENST00000514773 GRM8O00222 908 aa22.68■■□□□ 1.22
PCDH1-207ENST00000514773 CCT4P50991 539 aaKnown RBP22.68■■□□□ 1.22
PCDH1-207ENST00000514773 CC2D2BQ6DHV5 1058 aa22.68■■□□□ 1.22
PCDH1-207ENST00000514773 TMC4Q7Z404 712 aa22.68■■□□□ 1.22
PCDH1-207ENST00000514773 YTHDC1Q96MU7 727 aaKnown RBP22.68■■□□□ 1.22
PCDH1-207ENST00000514773 BCAR3O75815 825 aa22.67■■□□□ 1.22
PCDH1-207ENST00000514773 CCDC93Q567U6 631 aa22.67■■□□□ 1.22
PCDH1-207ENST00000514773 RTKN2Q8IZC4 609 aa22.67■■□□□ 1.22
PCDH1-207ENST00000514773 JARID2Q92833 1246 aaPredicted RBP22.67■■□□□ 1.22
PCDH1-207ENST00000514773 FRAT1Q92837 279 aaPredicted RBP22.67■■□□□ 1.22
PCDH1-207ENST00000514773 ZNF219Q9P2Y4 722 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms