RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PDZRN3Q9UPQ7 1066 aa17.84■□□□□ 0.45
USP46-209ENST00000514536 CHD4Q14839 1912 aa17.84■□□□□ 0.45
USP46-209ENST00000514536 TRIM28Q13263 835 aaKnown RBP17.83■□□□□ 0.45
USP46-209ENST00000514536 SYNE4Q8N205 404 aa17.83■□□□□ 0.45
USP46-209ENST00000514536 N4BP2Q86UW6 1770 aaPredicted RBP17.83■□□□□ 0.44
USP46-209ENST00000514536 ADCY9O60503 1353 aa17.83■□□□□ 0.44
USP46-209ENST00000514536 ABCC12Q96J65 1359 aa17.83■□□□□ 0.44
USP46-209ENST00000514536 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.44
USP46-209ENST00000514536 GRIN3BO60391 1043 aa17.83■□□□□ 0.44
USP46-209ENST00000514536 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.44
USP46-209ENST00000514536 KLRG2A4D1S0 409 aaPredicted RBP17.82■□□□□ 0.44
USP46-209ENST00000514536 SRGNP10124 158 aa17.82■□□□□ 0.44
USP46-209ENST00000514536 MRPL50Q8N5N7 158 aaKnown RBP17.82■□□□□ 0.44
USP46-209ENST00000514536 SSH1Q8WYL5 1049 aa17.82■□□□□ 0.44
USP46-209ENST00000514536 ZBED9Q6R2W3 1325 aa17.82■□□□□ 0.44
USP46-209ENST00000514536 SLC10A5Q5PT55 438 aa17.81■□□□□ 0.44
USP46-209ENST00000514536 TTLL6Q8N841 843 aa17.81■□□□□ 0.44
USP46-209ENST00000514536 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
USP46-209ENST00000514536 MASTLQ96GX5 879 aa17.81■□□□□ 0.44
USP46-209ENST00000514536 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
USP46-209ENST00000514536 SH3TC1Q8TE82 1336 aa17.81■□□□□ 0.44
USP46-209ENST00000514536 KIAA1551Q9HCM1 1747 aa17.81■□□□□ 0.44
USP46-209ENST00000514536 CT47B1P0C2W7 299 aaPredicted RBP17.8■□□□□ 0.44
USP46-209ENST00000514536 HCLS1P14317 486 aaPredicted RBP17.8■□□□□ 0.44
USP46-209ENST00000514536 NEXNQ0ZGT2 675 aa17.8■□□□□ 0.44
USP46-209ENST00000514536 RTL5Q5HYW3 569 aaPredicted RBP17.8■□□□□ 0.44
USP46-209ENST00000514536 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
USP46-209ENST00000514536 DNAAF4Q8WXU2 420 aa17.8■□□□□ 0.44
USP46-209ENST00000514536 F6X3S4 739 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 IGKV5-2P06315 115 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 NPR1P16066 1061 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 STYK1Q6J9G0 422 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 NLRP3Q96P20 1036 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
USP46-209ENST00000514536 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 ANKRD31Q8N7Z5 1873 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 CNKSR1Q969H4 720 aa17.79■□□□□ 0.44
USP46-209ENST00000514536 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
USP46-209ENST00000514536 ARHGAP27Q6ZUM4 889 aa17.78■□□□□ 0.44
USP46-209ENST00000514536 JARID2Q92833 1246 aaPredicted RBP17.78■□□□□ 0.44
USP46-209ENST00000514536 SMC4Q9NTJ3 1288 aa17.78■□□□□ 0.44
USP46-209ENST00000514536 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.44
USP46-209ENST00000514536 CRY2Q49AN0 593 aa17.77■□□□□ 0.44
USP46-209ENST00000514536 ZBTB38Q8NAP3 1195 aaPredicted RBP17.77■□□□□ 0.44
USP46-209ENST00000514536 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
USP46-209ENST00000514536 ARFGEF2Q9Y6D5 1785 aa17.76■□□□□ 0.43
USP46-209ENST00000514536 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
USP46-209ENST00000514536 IRS4O14654 1257 aaPredicted RBP17.75■□□□□ 0.43
USP46-209ENST00000514536 PCCAP05165 728 aaPredicted RBP17.75■□□□□ 0.43
USP46-209ENST00000514536 RARSP54136 660 aaKnown RBP17.75■□□□□ 0.43
USP46-209ENST00000514536 LINS1Q8NG48 757 aa17.75■□□□□ 0.43
USP46-209ENST00000514536 ANKRD36CQ5JPF3 1778 aa17.75■□□□□ 0.43
USP46-209ENST00000514536 RIC1Q4ADV7 1423 aa17.75■□□□□ 0.43
USP46-209ENST00000514536 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
USP46-209ENST00000514536 SLC4A10Q6U841 1118 aa17.74■□□□□ 0.43
USP46-209ENST00000514536 RBM17Q96I25 401 aaKnown RBP17.74■□□□□ 0.43
USP46-209ENST00000514536 C21orf2O43822 256 aa17.74■□□□□ 0.43
USP46-209ENST00000514536 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
USP46-209ENST00000514536 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
USP46-209ENST00000514536 GCKRQ14397 625 aa17.74■□□□□ 0.43
USP46-209ENST00000514536 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
USP46-209ENST00000514536 CACNA1FO60840 1977 aa17.73■□□□□ 0.43
USP46-209ENST00000514536 PTPRCP08575 1304 aa17.73■□□□□ 0.43
USP46-209ENST00000514536 NOB1Q9ULX3 412 aaKnown RBP17.73■□□□□ 0.43
USP46-209ENST00000514536 H7C1W4 665 aa17.72■□□□□ 0.43
USP46-209ENST00000514536 C1QTNF8P60827 252 aa17.72■□□□□ 0.43
USP46-209ENST00000514536 CRAMP1Q96RY5 1269 aa17.72■□□□□ 0.43
USP46-209ENST00000514536 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
USP46-209ENST00000514536 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.43
USP46-209ENST00000514536 HSP90B1P14625 803 aaKnown RBP17.71■□□□□ 0.43
USP46-209ENST00000514536 COL11A2P13942 1736 aaPredicted RBP17.71■□□□□ 0.43
USP46-209ENST00000514536 PDE8AO60658 829 aa17.7■□□□□ 0.42
USP46-209ENST00000514536 BRPF1P55201 1214 aaPredicted RBP17.7■□□□□ 0.42
USP46-209ENST00000514536 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
USP46-209ENST00000514536 UBE3BQ7Z3V4 1068 aa17.7■□□□□ 0.42
USP46-209ENST00000514536 C7orf43Q8WVR3 580 aa17.7■□□□□ 0.42
USP46-209ENST00000514536 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
USP46-209ENST00000514536 CDHR2Q9BYE9 1310 aa17.7■□□□□ 0.42
USP46-209ENST00000514536 BCAR3O75815 825 aa17.7■□□□□ 0.42
USP46-209ENST00000514536 DDX46Q7L014 1031 aaKnown RBP17.7■□□□□ 0.42
USP46-209ENST00000514536 DLEC1Q9Y238 1755 aa17.69■□□□□ 0.42
USP46-209ENST00000514536 ALDH1L1O75891 902 aa17.69■□□□□ 0.42
USP46-209ENST00000514536 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
USP46-209ENST00000514536 ABCC4O15439 1325 aa17.68■□□□□ 0.42
USP46-209ENST00000514536 CASP7P55210 303 aa17.68■□□□□ 0.42
USP46-209ENST00000514536 RASSF7Q02833 373 aa17.67■□□□□ 0.42
USP46-209ENST00000514536 SOGA3Q5TF21 947 aa17.67■□□□□ 0.42
USP46-209ENST00000514536 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
USP46-209ENST00000514536 CCDC85AQ96PX6 553 aaPredicted RBP17.67■□□□□ 0.42
USP46-209ENST00000514536 SLX4Q8IY92 1834 aa17.67■□□□□ 0.42
USP46-209ENST00000514536 PPEF1O14829 653 aaPredicted RBP17.66■□□□□ 0.42
USP46-209ENST00000514536 BBOX1O75936 387 aa17.66■□□□□ 0.42
USP46-209ENST00000514536 GRAPQ13588 217 aa17.66■□□□□ 0.42
USP46-209ENST00000514536 GRAPLQ8TC17 118 aaPredicted RBP17.66■□□□□ 0.42
USP46-209ENST00000514536 API5Q9BZZ5 524 aaKnown RBP17.66■□□□□ 0.42
USP46-209ENST00000514536 C9orf78Q9NZ63 289 aaPredicted RBP17.66■□□□□ 0.42
USP46-209ENST00000514536 ARFGEF1Q9Y6D6 1849 aa17.66■□□□□ 0.42
USP46-209ENST00000514536 NFKBIEO00221 500 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms