RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
DDR1-276ENST00000514534 LAMB4A4D0S4 1761 aa13.63□□□□□ -0.23
DDR1-276ENST00000514534 KIF7Q2M1P5 1343 aa13.63□□□□□ -0.23
DDR1-276ENST00000514534 NPC1L1Q9UHC9 1359 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 CA12O43570 354 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 PRKAR2BP31323 418 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 MAP2K2P36507 400 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 SCNN1DP51172 638 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 GRM1Q13255 1194 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 CRY2Q49AN0 593 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 CYP4F22Q6NT55 531 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 LARGE2Q8N3Y3 721 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 RPGRQ92834 1020 aaKnown RBP13.62□□□□□ -0.23
DDR1-276ENST00000514534 PCGF6Q9BYE7 350 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 TLL2Q9Y6L7 1015 aa13.62□□□□□ -0.23
DDR1-276ENST00000514534 NBPF26B4DH59 902 aa13.61□□□□□ -0.23
DDR1-276ENST00000514534 NBPF10Q6P3W6 841 aaKnown RBP13.61□□□□□ -0.23
DDR1-276ENST00000514534 NBPF15Q8N660 670 aa13.61□□□□□ -0.23
DDR1-276ENST00000514534 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
DDR1-276ENST00000514534 EPS15P42566 896 aa13.6□□□□□ -0.23
DDR1-276ENST00000514534 HLFQ16534 295 aa13.6□□□□□ -0.23
DDR1-276ENST00000514534 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
DDR1-276ENST00000514534 NIM1KQ8IY84 436 aa13.6□□□□□ -0.23
DDR1-276ENST00000514534 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
DDR1-276ENST00000514534 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
DDR1-276ENST00000514534 TMX4Q9H1E5 349 aaPredicted RBP13.6□□□□□ -0.23
DDR1-276ENST00000514534 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
DDR1-276ENST00000514534 COL4A5P29400 1685 aa13.59□□□□□ -0.23
DDR1-276ENST00000514534 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
DDR1-276ENST00000514534 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
DDR1-276ENST00000514534 CST9Q5W186 159 aa13.59□□□□□ -0.23
DDR1-276ENST00000514534 RBM17Q96I25 401 aaKnown RBP13.59□□□□□ -0.23
DDR1-276ENST00000514534 HHIPL1Q96JK4 782 aa13.59□□□□□ -0.23
DDR1-276ENST00000514534 VPS33BQ9H267 617 aa13.59□□□□□ -0.23
DDR1-276ENST00000514534 ADARB2Q9NS39 739 aaKnown RBP13.59□□□□□ -0.23
DDR1-276ENST00000514534 CASP8AP2Q9UKL3 1982 aa13.59□□□□□ -0.23
DDR1-276ENST00000514534 ABCC12Q96J65 1359 aa13.58□□□□□ -0.23
DDR1-276ENST00000514534 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
DDR1-276ENST00000514534 HOXA10P31260 410 aaPredicted RBP13.58□□□□□ -0.24
DDR1-276ENST00000514534 FMR1Q06787 632 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDR1-276ENST00000514534 MCM10Q7L590 875 aa13.58□□□□□ -0.24
DDR1-276ENST00000514534 NUTM1Q86Y26 1132 aa13.58□□□□□ -0.24
DDR1-276ENST00000514534 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
DDR1-276ENST00000514534 CRAMP1Q96RY5 1269 aa13.58□□□□□ -0.24
DDR1-276ENST00000514534 TRAF5O00463 557 aa13.57□□□□□ -0.24
DDR1-276ENST00000514534 PPEF1O14829 653 aaPredicted RBP13.57□□□□□ -0.24
DDR1-276ENST00000514534 PPIP5K2O43314 1243 aa13.57□□□□□ -0.24
DDR1-276ENST00000514534 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
DDR1-276ENST00000514534 KIF6Q6ZMV9 814 aa13.57□□□□□ -0.24
DDR1-276ENST00000514534 SAPCD2Q86UD0 394 aa13.57□□□□□ -0.24
DDR1-276ENST00000514534 GPRC5DQ9NZD1 345 aa13.57□□□□□ -0.24
DDR1-276ENST00000514534 TSKSQ9UJT2 592 aa13.57□□□□□ -0.24
DDR1-276ENST00000514534 MAP3K15Q6ZN16 1313 aa13.57□□□□□ -0.24
DDR1-276ENST00000514534 AOC2O75106 756 aa13.56□□□□□ -0.24
DDR1-276ENST00000514534 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
DDR1-276ENST00000514534 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
DDR1-276ENST00000514534 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
DDR1-276ENST00000514534 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
DDR1-276ENST00000514534 SUPT20HQ8NEM7 779 aa13.56□□□□□ -0.24
DDR1-276ENST00000514534 MCOLN1Q9GZU1 580 aa13.56□□□□□ -0.24
DDR1-276ENST00000514534 NGEFQ8N5V2 710 aa13.55□□□□□ -0.24
DDR1-276ENST00000514534 CDHR2Q9BYE9 1310 aa13.55□□□□□ -0.24
DDR1-276ENST00000514534 KDM3BQ7LBC6 1761 aa13.54□□□□□ -0.24
DDR1-276ENST00000514534 U2AF1L5P0DN76 240 aaPredicted RBP13.54□□□□□ -0.24
DDR1-276ENST00000514534 GPTP24298 496 aa13.54□□□□□ -0.24
DDR1-276ENST00000514534 U2AF1Q01081 240 aaKnown RBP eCLIP13.54□□□□□ -0.24
DDR1-276ENST00000514534 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
DDR1-276ENST00000514534 PPP1R42Q7Z4L9 355 aa13.54□□□□□ -0.24
DDR1-276ENST00000514534 PNISRQ8TF01 805 aaKnown RBP13.54□□□□□ -0.24
DDR1-276ENST00000514534 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
DDR1-276ENST00000514534 ZNRF3Q9ULT6 936 aa13.54□□□□□ -0.24
DDR1-276ENST00000514534 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
DDR1-276ENST00000514534 CXCL9Q07325 125 aa13.53□□□□□ -0.24
DDR1-276ENST00000514534 DGKZQ13574 1117 aa13.53□□□□□ -0.24
DDR1-276ENST00000514534 AOC3Q16853 763 aa13.53□□□□□ -0.24
DDR1-276ENST00000514534 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
DDR1-276ENST00000514534 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
DDR1-276ENST00000514534 PGAP2Q9UHJ9 254 aa13.53□□□□□ -0.24
DDR1-276ENST00000514534 RRP7AQ9Y3A4 280 aaKnown RBP13.53□□□□□ -0.24
DDR1-276ENST00000514534 ATP6V0A2Q9Y487 856 aa13.53□□□□□ -0.24
DDR1-276ENST00000514534 NEFMP07197 916 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 NOGQ13253 232 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 PARP10Q53GL7 1025 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 SUSD4Q5VX71 490 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 CIAPIN1Q6FI81 312 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 TTLL7Q6ZT98 887 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 ZNF34Q8IZ26 560 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 GLIS2Q9BZE0 524 aaPredicted RBP13.52□□□□□ -0.25
DDR1-276ENST00000514534 ZNF408Q9H9D4 720 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 UBN2Q6ZU65 1347 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.25
DDR1-276ENST00000514534 NTSR2O95665 410 aa13.51□□□□□ -0.25
DDR1-276ENST00000514534 GMPSP49915 693 aaPredicted RBP13.51□□□□□ -0.25
DDR1-276ENST00000514534 TNIP1Q15025 636 aa13.51□□□□□ -0.25
DDR1-276ENST00000514534 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
DDR1-276ENST00000514534 RTFDC1Q9BY42 306 aaPredicted RBP13.51□□□□□ -0.25
DDR1-276ENST00000514534 ZBTB3Q9H5J0 574 aa13.51□□□□□ -0.25
DDR1-276ENST00000514534 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
DDR1-276ENST00000514534 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms