RNA–Protein interactions for RNA: ENST00000514279.5

AFP-206, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-206ENST00000514279 POLR3AO14802 1390 aaPredicted RBP8.54□□□□□ -1.04
AFP-206ENST00000514279 ATAD2Q6PL18 1390 aa8.54□□□□□ -1.04
AFP-206ENST00000514279 BMP2P12643 396 aa8.54□□□□□ -1.04
AFP-206ENST00000514279 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
AFP-206ENST00000514279 UNC5CLQ8IV45 518 aa8.54□□□□□ -1.04
AFP-206ENST00000514279 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
AFP-206ENST00000514279 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
AFP-206ENST00000514279 LRP6O75581 1613 aa8.54□□□□□ -1.04
AFP-206ENST00000514279 ST20-MTHFSA0A0A6YYL1 179 aa8.53□□□□□ -1.04
AFP-206ENST00000514279 FAM83GA6ND36 823 aa8.53□□□□□ -1.04
AFP-206ENST00000514279 UPP2O95045 317 aa8.53□□□□□ -1.04
AFP-206ENST00000514279 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
AFP-206ENST00000514279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.53□□□□□ -1.041e-6■■■■□ 25.8
AFP-206ENST00000514279 HDGFL2Q7Z4V5 671 aaPredicted RBP8.53□□□□□ -1.04
AFP-206ENST00000514279 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
AFP-206ENST00000514279 CNTNAP3BQ96NU0 1288 aa8.53□□□□□ -1.04
AFP-206ENST00000514279 CNTNAP3Q9BZ76 1288 aa8.53□□□□□ -1.04
AFP-206ENST00000514279 PPIP5K1Q6PFW1 1433 aa8.53□□□□□ -1.04
AFP-206ENST00000514279 F12P00748 615 aaPredicted RBP8.52□□□□□ -1.05
AFP-206ENST00000514279 TMF1P82094 1093 aa8.52□□□□□ -1.05
AFP-206ENST00000514279 NR5A1Q13285 461 aa8.52□□□□□ -1.05
AFP-206ENST00000514279 AMHR2Q16671 573 aa8.52□□□□□ -1.05
AFP-206ENST00000514279 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
AFP-206ENST00000514279 ZNF385CQ66K41 422 aaPredicted RBP8.52□□□□□ -1.05
AFP-206ENST00000514279 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
AFP-206ENST00000514279 GJD4Q96KN9 370 aaPredicted RBP8.52□□□□□ -1.05
AFP-206ENST00000514279 TERF2IPQ9NYB0 399 aa8.52□□□□□ -1.05
AFP-206ENST00000514279 CCDC9Q9Y3X0 531 aaKnown RBP8.52□□□□□ -1.05
AFP-206ENST00000514279 ARHGEF28Q8N1W1 1705 aaKnown RBP8.51□□□□□ -1.05
AFP-206ENST00000514279 SBNO2Q9Y2G9 1366 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 EVA1CP58658 441 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 CSPP1Q1MSJ5 1256 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 NUTM2GQ5VZR2 741 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 SVOPQ8N4V2 548 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 ZBTB3Q9H5J0 574 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 ATP7BP35670 1465 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 RALGAPBQ86X10 1494 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 TRPM1Q7Z4N2 1603 aa8.51□□□□□ -1.05
AFP-206ENST00000514279 GJA5P36382 358 aa8.5□□□□□ -1.05
AFP-206ENST00000514279 GRM5P41594 1212 aa8.5□□□□□ -1.05
AFP-206ENST00000514279 ZC3H6P61129 1189 aaKnown RBP8.5□□□□□ -1.05
AFP-206ENST00000514279 VPS72Q15906 364 aa8.5□□□□□ -1.05
AFP-206ENST00000514279 BPHLQ86WA6 291 aaPredicted RBP8.5□□□□□ -1.05
AFP-206ENST00000514279 MEIOBQ8N635 442 aa8.5□□□□□ -1.05
AFP-206ENST00000514279 KCNH5Q8NCM2 988 aa8.5□□□□□ -1.05
AFP-206ENST00000514279 TSC1Q92574 1164 aa8.5□□□□□ -1.05
AFP-206ENST00000514279 PRDM11Q9NQV5 511 aa8.5□□□□□ -1.05
AFP-206ENST00000514279 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
AFP-206ENST00000514279 TTC21AQ8NDW8 1320 aa8.5□□□□□ -1.05
AFP-206ENST00000514279 GCP02774 474 aa8.49□□□□□ -1.05
AFP-206ENST00000514279 FSHRP23945 695 aa8.49□□□□□ -1.05
AFP-206ENST00000514279 DIXDC1Q155Q3 683 aa8.49□□□□□ -1.05
AFP-206ENST00000514279 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
AFP-206ENST00000514279 GPR161Q8N6U8 529 aaKnown RBP8.49□□□□□ -1.05
AFP-206ENST00000514279 BTG4Q9NY30 223 aa8.49□□□□□ -1.05
AFP-206ENST00000514279 DNMT3LQ9UJW3 386 aa8.49□□□□□ -1.05
AFP-206ENST00000514279 COL22A1Q8NFW1 1626 aaPredicted RBP8.49□□□□□ -1.05
AFP-206ENST00000514279 TTC21BQ7Z4L5 1316 aa8.49□□□□□ -1.05
AFP-206ENST00000514279 USP32Q8NFA0 1604 aa8.48□□□□□ -1.05
AFP-206ENST00000514279 SPTLC1O15269 473 aa8.48□□□□□ -1.05
AFP-206ENST00000514279 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
AFP-206ENST00000514279 VSIG10Q8N0Z9 540 aa8.48□□□□□ -1.05
AFP-206ENST00000514279 TESK2Q96S53 571 aa8.48□□□□□ -1.05
AFP-206ENST00000514279 SLC12A5Q9H2X9 1139 aa8.48□□□□□ -1.05
AFP-206ENST00000514279 CDK12Q9NYV4 1490 aaPredicted RBP8.48□□□□□ -1.05
AFP-206ENST00000514279 KTN1Q86UP2 1357 aaKnown RBP8.48□□□□□ -1.05
AFP-206ENST00000514279 ATRNO75882 1429 aa8.47□□□□□ -1.05
AFP-206ENST00000514279 BCL9LQ86UU0 1499 aa8.47□□□□□ -1.05
AFP-206ENST00000514279 MSTNO14793 375 aa8.47□□□□□ -1.05
AFP-206ENST00000514279 ARHGEF15O94989 841 aa8.47□□□□□ -1.05
AFP-206ENST00000514279 MARSP56192 900 aaKnown RBP8.47□□□□□ -1.05
AFP-206ENST00000514279 EIF4G2P78344 907 aaKnown RBP eCLIP8.47□□□□□ -1.05
AFP-206ENST00000514279 CCDC125Q86Z20 511 aa8.47□□□□□ -1.05
AFP-206ENST00000514279 NINLQ9Y2I6 1382 aa8.47□□□□□ -1.05
AFP-206ENST00000514279 USP6P35125 1406 aa8.46□□□□□ -1.05
AFP-206ENST00000514279 ITSN1Q15811 1721 aa8.46□□□□□ -1.05
AFP-206ENST00000514279 SLIT2O94813 1529 aa8.46□□□□□ -1.05
AFP-206ENST00000514279 ZMYND10O75800 440 aa8.46□□□□□ -1.06
AFP-206ENST00000514279 CHRNA2Q15822 529 aa8.46□□□□□ -1.06
AFP-206ENST00000514279 RIC3Q7Z5B4 369 aa8.46□□□□□ -1.06
AFP-206ENST00000514279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.46□□□□□ -1.06
AFP-206ENST00000514279 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
AFP-206ENST00000514279 SCARF2Q96GP6 870 aaPredicted RBP8.46□□□□□ -1.06
AFP-206ENST00000514279 USP47Q96K76 1375 aa8.46□□□□□ -1.06
AFP-206ENST00000514279 ZBTB7CA1YPR0 619 aa8.45□□□□□ -1.06
AFP-206ENST00000514279 VASH1Q7L8A9 365 aaPredicted RBP8.45□□□□□ -1.06
AFP-206ENST00000514279 SEPT12Q8IYM1 358 aa8.45□□□□□ -1.06
AFP-206ENST00000514279 Q8N3U1 123 aa8.45□□□□□ -1.06
AFP-206ENST00000514279 STRN4Q9NRL3 753 aa8.45□□□□□ -1.06
AFP-206ENST00000514279 QRICH2Q9H0J4 1663 aa8.45□□□□□ -1.06
AFP-206ENST00000514279 USP19O94966 1318 aa8.45□□□□□ -1.06
AFP-206ENST00000514279 KIAA0232Q92628 1395 aa8.45□□□□□ -1.06
AFP-206ENST00000514279 CPSF1Q10570 1443 aaKnown RBP8.45□□□□□ -1.06
AFP-206ENST00000514279 MAGEB6P1A0A0J9YX57 407 aa8.44□□□□□ -1.06
AFP-206ENST00000514279 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
AFP-206ENST00000514279 COL25A1Q9BXS0 654 aaPredicted RBP8.44□□□□□ -1.06
AFP-206ENST00000514279 THRAP3Q9Y2W1 955 aaKnown RBP8.44□□□□□ -1.06
AFP-206ENST00000514279 CPDO75976 1380 aa8.44□□□□□ -1.06
AFP-206ENST00000514279 SF3B2Q13435 895 aaKnown RBP8.43□□□□□ -1.06
AFP-206ENST00000514279 PLA2G4EQ3MJ16 856 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms