RNA–Protein interactions for RNA: ENST00000513904.1

CUL9-216, Transcript of cullin 9, humanhuman

TSL 4

Gene CUL9, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9-216ENST00000513904 TSR2Q969E8 191 aaKnown RBP23.87■■□□□ 1.41
CUL9-216ENST00000513904 CHMP4AQ9BY43 222 aa23.87■■□□□ 1.41
CUL9-216ENST00000513904 TNRC6CQ9HCJ0 1690 aaKnown RBP23.86■■□□□ 1.41
CUL9-216ENST00000513904 NLRP10Q86W26 655 aa23.86■■□□□ 1.41
CUL9-216ENST00000513904 C7orf43Q8WVR3 580 aa23.86■■□□□ 1.41
CUL9-216ENST00000513904 SALL2Q9Y467 1007 aaPredicted RBP23.85■■□□□ 1.41
CUL9-216ENST00000513904 ANKRD36CQ5JPF3 1778 aa23.85■■□□□ 1.41
CUL9-216ENST00000513904 FER1L6Q2WGJ9 1857 aa23.85■■□□□ 1.41
CUL9-216ENST00000513904 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
CUL9-216ENST00000513904 LTBP3Q9NS15 1303 aa23.84■■□□□ 1.41
CUL9-216ENST00000513904 ZC3H4Q9UPT8 1303 aaKnown RBP23.84■■□□□ 1.41
CUL9-216ENST00000513904 CCDC30Q5VVM6 783 aa23.84■■□□□ 1.41
CUL9-216ENST00000513904 TSPYL6Q8N831 410 aa23.84■■□□□ 1.41
CUL9-216ENST00000513904 TAOK3Q9H2K8 898 aa23.84■■□□□ 1.41
CUL9-216ENST00000513904 SLC10A5Q5PT55 438 aa23.83■■□□□ 1.41
CUL9-216ENST00000513904 RPGRQ92834 1020 aaKnown RBP23.83■■□□□ 1.41
CUL9-216ENST00000513904 CCDC88AQ3V6T2 1871 aa23.82■■□□□ 1.4
CUL9-216ENST00000513904 KIF3CO14782 793 aa23.82■■□□□ 1.4
CUL9-216ENST00000513904 HOXA10P31260 410 aaPredicted RBP23.82■■□□□ 1.4
CUL9-216ENST00000513904 CCDC93Q567U6 631 aa23.82■■□□□ 1.4
CUL9-216ENST00000513904 WDR63Q8IWG1 891 aa23.82■■□□□ 1.4
CUL9-216ENST00000513904 NLRP3Q96P20 1036 aa23.82■■□□□ 1.4
CUL9-216ENST00000513904 PHAXQ9H814 394 aaKnown RBP23.82■■□□□ 1.4
CUL9-216ENST00000513904 TRMT112Q9UI30 125 aaKnown RBP23.82■■□□□ 1.4
CUL9-216ENST00000513904 GOLGA2Q08379 1002 aa23.81■■□□□ 1.4
CUL9-216ENST00000513904 KDM2BQ8NHM5 1336 aa23.81■■□□□ 1.4
CUL9-216ENST00000513904 C3orf67Q6ZVT6 689 aa23.8■■□□□ 1.4
CUL9-216ENST00000513904 RBM17Q96I25 401 aaKnown RBP23.8■■□□□ 1.4
CUL9-216ENST00000513904 ISCA1Q9BUE6 129 aa23.8■■□□□ 1.4
CUL9-216ENST00000513904 NMRK2Q9NPI5 230 aa23.8■■□□□ 1.4
CUL9-216ENST00000513904 TWISTNBQ3B726 338 aaPredicted RBP23.79■■□□□ 1.4
CUL9-216ENST00000513904 RIC3Q7Z5B4 369 aa23.79■■□□□ 1.4
CUL9-216ENST00000513904 CRAMP1Q96RY5 1269 aa23.79■■□□□ 1.4
CUL9-216ENST00000513904 SH3TC1Q8TE82 1336 aa23.79■■□□□ 1.4
CUL9-216ENST00000513904 ATP5J2-PTCD1G3V325 749 aa23.78■■□□□ 1.4
CUL9-216ENST00000513904 OLFM4Q6UX06 510 aa23.78■■□□□ 1.4
CUL9-216ENST00000513904 RTKN2Q8IZC4 609 aa23.78■■□□□ 1.4
CUL9-216ENST00000513904 SYNE4Q8N205 404 aa23.78■■□□□ 1.4
CUL9-216ENST00000513904 FANCIQ9NVI1 1328 aa23.78■■□□□ 1.4
CUL9-216ENST00000513904 HCLS1P14317 486 aaPredicted RBP23.77■■□□□ 1.4
CUL9-216ENST00000513904 FKBP4Q02790 459 aaKnown RBP eCLIP23.77■■□□□ 1.4
CUL9-216ENST00000513904 TRIM28Q13263 835 aaKnown RBP23.77■■□□□ 1.4
CUL9-216ENST00000513904 GLTPD2A6NH11 291 aa23.76■■□□□ 1.39
CUL9-216ENST00000513904 STK31Q9BXU1 1019 aa23.76■■□□□ 1.39
CUL9-216ENST00000513904 DICER1Q9UPY3 1922 aaKnown RBP23.76■■□□□ 1.39
CUL9-216ENST00000513904 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
CUL9-216ENST00000513904 DDX58O95786 925 aaKnown RBP23.75■■□□□ 1.39
CUL9-216ENST00000513904 CC2D2BQ6DHV5 1058 aa23.75■■□□□ 1.39
CUL9-216ENST00000513904 ZNF428Q96B54 188 aa23.75■■□□□ 1.39
CUL9-216ENST00000513904 TCERG1O14776 1098 aaKnown RBP23.73■■□□□ 1.39
CUL9-216ENST00000513904 PPEF1O14829 653 aaPredicted RBP23.73■■□□□ 1.39
CUL9-216ENST00000513904 DPY19L2Q6NUT2 758 aa23.73■■□□□ 1.39
CUL9-216ENST00000513904 FAM89AQ96GI7 184 aa23.73■■□□□ 1.39
CUL9-216ENST00000513904 RRAGCQ9HB90 399 aa23.73■■□□□ 1.39
CUL9-216ENST00000513904 TOMM70O94826 608 aa23.72■■□□□ 1.39
CUL9-216ENST00000513904 MYD88Q99836 296 aa23.72■■□□□ 1.39
CUL9-216ENST00000513904 METTL22Q9BUU2 404 aaPredicted RBP23.72■■□□□ 1.39
CUL9-216ENST00000513904 ZNF277Q9NRM2 450 aaPredicted RBP23.72■■□□□ 1.39
CUL9-216ENST00000513904 ABCC4O15439 1325 aa23.72■■□□□ 1.39
CUL9-216ENST00000513904 SNED1Q8TER0 1413 aa23.71■■□□□ 1.39
CUL9-216ENST00000513904 GRIPAP1Q4V328 841 aa23.71■■□□□ 1.39
CUL9-216ENST00000513904 C16orf71Q8IYS4 520 aaPredicted RBP23.71■■□□□ 1.39
CUL9-216ENST00000513904 PSMD1Q99460 953 aa23.71■■□□□ 1.39
CUL9-216ENST00000513904 MYH16Q9H6N6 1097 aa23.71■■□□□ 1.39
CUL9-216ENST00000513904 SPINK5Q9NQ38 1064 aaPredicted RBP23.71■■□□□ 1.39
CUL9-216ENST00000513904 SLC4A2P04920 1241 aa23.7■■□□□ 1.38
CUL9-216ENST00000513904 EXOSC9Q06265 439 aaKnown RBP23.7■■□□□ 1.38
CUL9-216ENST00000513904 KSR2Q6VAB6 950 aa23.7■■□□□ 1.38
CUL9-216ENST00000513904 DDX46Q7L014 1031 aaKnown RBP23.7■■□□□ 1.38
CUL9-216ENST00000513904 CCDC191Q8NCU4 936 aa23.7■■□□□ 1.38
CUL9-216ENST00000513904 LAMB2P55268 1798 aa23.7■■□□□ 1.38
CUL9-216ENST00000513904 VAMP4O75379 141 aa23.69■■□□□ 1.38
CUL9-216ENST00000513904 RTL5Q5HYW3 569 aaPredicted RBP23.69■■□□□ 1.38
CUL9-216ENST00000513904 ZBTB38Q8NAP3 1195 aaPredicted RBP23.69■■□□□ 1.38
CUL9-216ENST00000513904 TMX4Q9H1E5 349 aaPredicted RBP23.69■■□□□ 1.38
CUL9-216ENST00000513904 MAP3K2Q9Y2U5 619 aa23.69■■□□□ 1.38
CUL9-216ENST00000513904 PI4KAP2A4QPH2 592 aa23.68■■□□□ 1.38
CUL9-216ENST00000513904 IRS4O14654 1257 aaPredicted RBP23.68■■□□□ 1.38
CUL9-216ENST00000513904 BBOX1O75936 387 aa23.68■■□□□ 1.38
CUL9-216ENST00000513904 IARSP41252 1262 aaKnown RBP23.68■■□□□ 1.38
CUL9-216ENST00000513904 PI4KAP1Q8N8J0 262 aa23.68■■□□□ 1.38
CUL9-216ENST00000513904 ATP6V0A2Q9Y487 856 aa23.68■■□□□ 1.38
CUL9-216ENST00000513904 ZNF521Q96K83 1311 aa23.67■■□□□ 1.38
CUL9-216ENST00000513904 GRAPQ13588 217 aa23.67■■□□□ 1.38
CUL9-216ENST00000513904 G2E3Q7L622 706 aa23.67■■□□□ 1.38
CUL9-216ENST00000513904 RBM46Q8TBY0 533 aaKnown RBP23.67■■□□□ 1.38
CUL9-216ENST00000513904 GRAPLQ8TC17 118 aaPredicted RBP23.67■■□□□ 1.38
CUL9-216ENST00000513904 CWC25Q9NXE8 425 aaPredicted RBP23.67■■□□□ 1.38
CUL9-216ENST00000513904 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
CUL9-216ENST00000513904 VEGFAP15692 232 aaPredicted RBP23.66■■□□□ 1.38
CUL9-216ENST00000513904 SF3B3Q15393 1217 aaKnown RBP23.66■■□□□ 1.38
CUL9-216ENST00000513904 SLC51AQ86UW1 340 aa23.66■■□□□ 1.38
CUL9-216ENST00000513904 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
CUL9-216ENST00000513904 PCCAP05165 728 aaPredicted RBP23.65■■□□□ 1.38
CUL9-216ENST00000513904 HSP90B1P14625 803 aaKnown RBP23.65■■□□□ 1.38
CUL9-216ENST00000513904 FLIIQ13045 1269 aa23.65■■□□□ 1.38
CUL9-216ENST00000513904 SP8Q8IXZ3 490 aa23.65■■□□□ 1.38
CUL9-216ENST00000513904 CACNA1FO60840 1977 aa23.64■■□□□ 1.38
CUL9-216ENST00000513904 DDNO94850 711 aaPredicted RBP23.64■■□□□ 1.37
CUL9-216ENST00000513904 HSPA6P17066 643 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms