RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 API5Q9BZZ5 524 aaKnown RBP9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 TMX4Q9H1E5 349 aaPredicted RBP9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 ALDH1L1O75891 902 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 FKBP5Q13451 457 aaPredicted RBP9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 GPR162Q16538 588 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 DALRD3Q5D0E6 543 aaKnown RBP9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 C2CD5Q86YS7 1000 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 DNAAF4Q8WXU2 420 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 NLRP3Q96P20 1036 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 KIAA1551Q9HCM1 1747 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 NTSR2O95665 410 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 MS4A1P11836 297 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 LINS1Q8NG48 757 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 ARHGAP45Q92619 1136 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 ARFGEF1Q9Y6D6 1849 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 CDHR2Q9BYE9 1310 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 PCCAP05165 728 aaPredicted RBP9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 TTLL6Q8N841 843 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 LAMB2P55268 1798 aa9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 RBM17Q96I25 401 aaKnown RBP9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 SPINK5Q9NQ38 1064 aaPredicted RBP9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 TRMT112Q9UI30 125 aaKnown RBP9.07□□□□□ -0.96
RAPGEF2-212ENST00000513816 ANXA1P04083 346 aa9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 ZBTB38Q8NAP3 1195 aaPredicted RBP9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 CRAMP1Q96RY5 1269 aa9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 MAP3K2Q9Y2U5 619 aa9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 DPEP1P16444 411 aa9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 HOXA10P31260 410 aaPredicted RBP9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 RPGRQ92834 1020 aaKnown RBP9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 SUSD4Q5VX71 490 aa9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 MRPL50Q8N5N7 158 aaKnown RBP9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 MYD88Q99836 296 aa9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 SMC4Q9NTJ3 1288 aa9.06□□□□□ -0.96
RAPGEF2-212ENST00000513816 BRCA1P38398 1863 aaKnown RBP9.05□□□□□ -0.96
RAPGEF2-212ENST00000513816 PI4KAP2A4QPH2 592 aa9.05□□□□□ -0.96
RAPGEF2-212ENST00000513816 GPTP24298 496 aa9.05□□□□□ -0.96
RAPGEF2-212ENST00000513816 CRY2Q49AN0 593 aa9.05□□□□□ -0.96
RAPGEF2-212ENST00000513816 PI4KAP1Q8N8J0 262 aa9.05□□□□□ -0.96
RAPGEF2-212ENST00000513816 UBN2Q6ZU65 1347 aa9.05□□□□□ -0.96
RAPGEF2-212ENST00000513816 ANKRD31Q8N7Z5 1873 aa9.05□□□□□ -0.96
RAPGEF2-212ENST00000513816 ZC3H4Q9UPT8 1303 aaKnown RBP9.05□□□□□ -0.96
RAPGEF2-212ENST00000513816 SRGNP10124 158 aa9.04□□□□□ -0.96
RAPGEF2-212ENST00000513816 ADCY9O60503 1353 aa9.04□□□□□ -0.96
RAPGEF2-212ENST00000513816 CCT4P50991 539 aaKnown RBP9.04□□□□□ -0.96
RAPGEF2-212ENST00000513816 SF3B3Q15393 1217 aaKnown RBP9.04□□□□□ -0.96
RAPGEF2-212ENST00000513816 NLGN2Q8NFZ4 835 aa9.04□□□□□ -0.96
RAPGEF2-212ENST00000513816 SRCIN1Q9C0H9 1055 aa9.04□□□□□ -0.96
RAPGEF2-212ENST00000513816 LTBP3Q9NS15 1303 aa9.04□□□□□ -0.96
RAPGEF2-212ENST00000513816 RTL9Q8NET4 1388 aa9.04□□□□□ -0.96
RAPGEF2-212ENST00000513816 PDE8AO60658 829 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 BBOX1O75936 387 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 DDX46Q7L014 1031 aaKnown RBP9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 PLA2G12BQ9BX93 195 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 VPS33BQ9H267 617 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 CHMP4BQ9H444 224 aaKnown RBP9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 ERFEQ4G0M1 354 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 CCDC152Q4G0S7 254 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 RTKN2Q8IZC4 609 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 SSH1Q8WYL5 1049 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 ZNF622Q969S3 477 aaKnown RBP eCLIP9.03□□□□□ -0.964e-6■□□□□ 9.2
RAPGEF2-212ENST00000513816 BCS1LQ9Y276 419 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 N4BP2Q86UW6 1770 aaPredicted RBP9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 NEURL1BA8MQ27 555 aa9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.03□□□□□ -0.96
RAPGEF2-212ENST00000513816 A0A0G2JLW4 131 aa9.02□□□□□ -0.96
RAPGEF2-212ENST00000513816 IRS4O14654 1257 aaPredicted RBP9.02□□□□□ -0.96
RAPGEF2-212ENST00000513816 RARSP54136 660 aaKnown RBP9.02□□□□□ -0.96
RAPGEF2-212ENST00000513816 CHD4Q14839 1912 aa9.02□□□□□ -0.96
RAPGEF2-212ENST00000513816 CCDC93Q567U6 631 aa9.02□□□□□ -0.96
RAPGEF2-212ENST00000513816 SUPT20HQ8NEM7 779 aa9.02□□□□□ -0.96
RAPGEF2-212ENST00000513816 ABCC12Q96J65 1359 aa9.02□□□□□ -0.97
RAPGEF2-212ENST00000513816 H7C1W4 665 aa9.02□□□□□ -0.97
RAPGEF2-212ENST00000513816 KCNA3P22001 575 aa9.02□□□□□ -0.97
RAPGEF2-212ENST00000513816 GCKRQ14397 625 aa9.02□□□□□ -0.97
RAPGEF2-212ENST00000513816 G2E3Q7L622 706 aa9.02□□□□□ -0.97
RAPGEF2-212ENST00000513816 PELP1Q8IZL8 1130 aaKnown RBP9.02□□□□□ -0.97
RAPGEF2-212ENST00000513816 CDC5LQ99459 802 aaKnown RBP9.02□□□□□ -0.97
RAPGEF2-212ENST00000513816 COL11A2P13942 1736 aaPredicted RBP9.01□□□□□ -0.97
RAPGEF2-212ENST00000513816 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
RAPGEF2-212ENST00000513816 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
RAPGEF2-212ENST00000513816 BEND3Q5T5X7 828 aa9.01□□□□□ -0.97
RAPGEF2-212ENST00000513816 CHRNA5P30532 468 aa9.01□□□□□ -0.97
RAPGEF2-212ENST00000513816 GRAPQ13588 217 aa9.01□□□□□ -0.97
RAPGEF2-212ENST00000513816 GRAPLQ8TC17 118 aaPredicted RBP9.01□□□□□ -0.97
RAPGEF2-212ENST00000513816 C9orf78Q9NZ63 289 aaPredicted RBP9.01□□□□□ -0.97
RAPGEF2-212ENST00000513816 SENP3-EIF4A1A0A087X0R7 540 aa9□□□□□ -0.97
RAPGEF2-212ENST00000513816 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
RAPGEF2-212ENST00000513816 UTYO14607 1347 aa9□□□□□ -0.97
RAPGEF2-212ENST00000513816 GRM8O00222 908 aa9□□□□□ -0.97
RAPGEF2-212ENST00000513816 IGKV5-2P06315 115 aa9□□□□□ -0.97
RAPGEF2-212ENST00000513816 ZKSCAN2Q63HK3 967 aa9□□□□□ -0.97
RAPGEF2-212ENST00000513816 PRPF40BQ6NWY9 871 aaKnown RBP9□□□□□ -0.97
RAPGEF2-212ENST00000513816 DDX60Q8IY21 1712 aaKnown RBP9□□□□□ -0.97
RAPGEF2-212ENST00000513816 MYH3P11055 1940 aa9□□□□□ -0.97
RAPGEF2-212ENST00000513816 SP8Q8IXZ3 490 aa9□□□□□ -0.97
RAPGEF2-212ENST00000513816 TCERG1O14776 1098 aaKnown RBP8.99□□□□□ -0.97
RAPGEF2-212ENST00000513816 PPEF1O14829 653 aaPredicted RBP8.99□□□□□ -0.97
RAPGEF2-212ENST00000513816 GNAI3P08754 354 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms