RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
PTPN20-229ENST00000513756 TRAF5O00463 557 aa16.2■□□□□ 0.18
PTPN20-229ENST00000513756 KCNQ3O43525 872 aa16.2■□□□□ 0.18
PTPN20-229ENST00000513756 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
PTPN20-229ENST00000513756 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
PTPN20-229ENST00000513756 DGKZQ13574 1117 aa16.19■□□□□ 0.18
PTPN20-229ENST00000513756 CRY2Q49AN0 593 aa16.19■□□□□ 0.18
PTPN20-229ENST00000513756 SAPCD2Q86UD0 394 aa16.19■□□□□ 0.18
PTPN20-229ENST00000513756 NIM1KQ8IY84 436 aa16.19■□□□□ 0.18
PTPN20-229ENST00000513756 LTBP1Q14766 1721 aa16.19■□□□□ 0.18
PTPN20-229ENST00000513756 SNED1Q8TER0 1413 aa16.19■□□□□ 0.18
PTPN20-229ENST00000513756 CELF2O95319 508 aaKnown RBP16.18■□□□□ 0.18
PTPN20-229ENST00000513756 RPGRQ92834 1020 aaKnown RBP16.18■□□□□ 0.18
PTPN20-229ENST00000513756 CASP8AP2Q9UKL3 1982 aa16.17■□□□□ 0.18
PTPN20-229ENST00000513756 TMX4Q9H1E5 349 aaPredicted RBP16.17■□□□□ 0.18
PTPN20-229ENST00000513756 PRAMEF22A3QJZ6 481 aa16.16■□□□□ 0.18
PTPN20-229ENST00000513756 HOXA10P31260 410 aaPredicted RBP16.16■□□□□ 0.18
PTPN20-229ENST00000513756 RBM17Q96I25 401 aaKnown RBP16.16■□□□□ 0.18
PTPN20-229ENST00000513756 VPS33BQ9H267 617 aa16.16■□□□□ 0.18
PTPN20-229ENST00000513756 GPRC5DQ9NZD1 345 aa16.16■□□□□ 0.18
PTPN20-229ENST00000513756 PDE4DIPQ5VU43 2346 aa16.16■□□□□ 0.18
PTPN20-229ENST00000513756 COL4A5P29400 1685 aa16.15■□□□□ 0.18
PTPN20-229ENST00000513756 NBPF26B4DH59 902 aa16.15■□□□□ 0.18
PTPN20-229ENST00000513756 HLFQ16534 295 aa16.15■□□□□ 0.18
PTPN20-229ENST00000513756 NBPF10Q6P3W6 841 aaKnown RBP16.15■□□□□ 0.18
PTPN20-229ENST00000513756 NBPF15Q8N660 670 aa16.15■□□□□ 0.18
PTPN20-229ENST00000513756 PPIP5K2O43314 1243 aa16.14■□□□□ 0.17
PTPN20-229ENST00000513756 NOGQ13253 232 aa16.14■□□□□ 0.17
PTPN20-229ENST00000513756 CIAPIN1Q6FI81 312 aa16.14■□□□□ 0.17
PTPN20-229ENST00000513756 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
PTPN20-229ENST00000513756 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
PTPN20-229ENST00000513756 CRAMP1Q96RY5 1269 aa16.14■□□□□ 0.17
PTPN20-229ENST00000513756 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
PTPN20-229ENST00000513756 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
PTPN20-229ENST00000513756 ERVV-1B6SEH8 477 aa16.13■□□□□ 0.17
PTPN20-229ENST00000513756 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
PTPN20-229ENST00000513756 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
PTPN20-229ENST00000513756 ZC3H15Q8WU90 426 aaKnown RBP16.13■□□□□ 0.17
PTPN20-229ENST00000513756 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
PTPN20-229ENST00000513756 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
PTPN20-229ENST00000513756 SUPT20HQ8NEM7 779 aa16.12■□□□□ 0.17
PTPN20-229ENST00000513756 GLIS2Q9BZE0 524 aaPredicted RBP16.12■□□□□ 0.17
PTPN20-229ENST00000513756 ZNF408Q9H9D4 720 aa16.12■□□□□ 0.17
PTPN20-229ENST00000513756 ZNRF3Q9ULT6 936 aa16.12■□□□□ 0.17
PTPN20-229ENST00000513756 RIC1Q4ADV7 1423 aa16.11■□□□□ 0.17
PTPN20-229ENST00000513756 COL3A1P02461 1466 aaPredicted RBP16.11■□□□□ 0.17
PTPN20-229ENST00000513756 AOC3Q16853 763 aa16.11■□□□□ 0.17
PTPN20-229ENST00000513756 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
PTPN20-229ENST00000513756 PHACTR3Q96KR7 559 aa16.11■□□□□ 0.17
PTPN20-229ENST00000513756 CDHR2Q9BYE9 1310 aa16.11■□□□□ 0.17
PTPN20-229ENST00000513756 IBTKQ9P2D0 1353 aaPredicted RBP16.11■□□□□ 0.17
PTPN20-229ENST00000513756 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
PTPN20-229ENST00000513756 TCERG1O14776 1098 aaKnown RBP16.1■□□□□ 0.17
PTPN20-229ENST00000513756 PRKAR2BP31323 418 aa16.1■□□□□ 0.17
PTPN20-229ENST00000513756 GMPSP49915 693 aaPredicted RBP16.1■□□□□ 0.17
PTPN20-229ENST00000513756 CXCL9Q07325 125 aa16.1■□□□□ 0.17
PTPN20-229ENST00000513756 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
PTPN20-229ENST00000513756 PER1O15534 1290 aaPredicted RBP16.09■□□□□ 0.17
PTPN20-229ENST00000513756 TNIP1Q15025 636 aa16.09■□□□□ 0.17
PTPN20-229ENST00000513756 MCM10Q7L590 875 aa16.09■□□□□ 0.17
PTPN20-229ENST00000513756 BCL2L13Q9BXK5 485 aa16.09■□□□□ 0.17
PTPN20-229ENST00000513756 SAGE1Q9NXZ1 904 aa16.09■□□□□ 0.17
PTPN20-229ENST00000513756 MAP3K15Q6ZN16 1313 aa16.09■□□□□ 0.17
PTPN20-229ENST00000513756 HUNKP57058 714 aa16.08■□□□□ 0.16
PTPN20-229ENST00000513756 NGEFQ8N5V2 710 aa16.08■□□□□ 0.16
PTPN20-229ENST00000513756 RSPH6AQ9H0K4 717 aa16.08■□□□□ 0.16
PTPN20-229ENST00000513756 ATP6V0A2Q9Y487 856 aa16.08■□□□□ 0.16
PTPN20-229ENST00000513756 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
PTPN20-229ENST00000513756 PRPF38BQ5VTL8 546 aaKnown RBP16.07■□□□□ 0.16
PTPN20-229ENST00000513756 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
PTPN20-229ENST00000513756 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
PTPN20-229ENST00000513756 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
PTPN20-229ENST00000513756 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
PTPN20-229ENST00000513756 NUP98P52948 1817 aa16.07■□□□□ 0.16
PTPN20-229ENST00000513756 H7C1D1 291 aa16.06■□□□□ 0.16
PTPN20-229ENST00000513756 GPTP24298 496 aa16.06■□□□□ 0.16
PTPN20-229ENST00000513756 SOX10P56693 466 aa16.06■□□□□ 0.16
PTPN20-229ENST00000513756 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-229ENST00000513756 SUSD4Q5VX71 490 aa16.06■□□□□ 0.16
PTPN20-229ENST00000513756 CCDC102AQ96A19 550 aa16.06■□□□□ 0.16
PTPN20-229ENST00000513756 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
PTPN20-229ENST00000513756 HIRAP54198 1017 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-229ENST00000513756 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-229ENST00000513756 RGMBQ6NW40 437 aa16.05■□□□□ 0.16
PTPN20-229ENST00000513756 DPP8Q6V1X1 898 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-229ENST00000513756 USP48Q86UV5 1035 aa16.05■□□□□ 0.16
PTPN20-229ENST00000513756 CNOT7Q9UIV1 285 aaKnown RBP16.05■□□□□ 0.16
PTPN20-229ENST00000513756 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
PTPN20-229ENST00000513756 BBOX1O75936 387 aa16.04■□□□□ 0.16
PTPN20-229ENST00000513756 RAD17O75943 681 aa16.04■□□□□ 0.16
PTPN20-229ENST00000513756 NTSR2O95665 410 aa16.04■□□□□ 0.16
PTPN20-229ENST00000513756 ZNF34Q8IZ26 560 aa16.04■□□□□ 0.16
PTPN20-229ENST00000513756 C2orf69Q8N8R5 385 aa16.04■□□□□ 0.16
PTPN20-229ENST00000513756 TRPM4Q8TD43 1214 aa16.04■□□□□ 0.16
PTPN20-229ENST00000513756 ZIC5Q96T25 663 aa16.04■□□□□ 0.16
PTPN20-229ENST00000513756 RRP7AQ9Y3A4 280 aaKnown RBP16.04■□□□□ 0.16
PTPN20-229ENST00000513756 LAMB4A4D0S4 1761 aa16.03■□□□□ 0.16
PTPN20-229ENST00000513756 KIAA2012Q0VF49 1180 aa16.03■□□□□ 0.16
PTPN20-229ENST00000513756 DCTN1Q14203 1278 aa16.03■□□□□ 0.16
PTPN20-229ENST00000513756 PARP10Q53GL7 1025 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms