RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 LTBP1Q14766 1721 aa12.17□□□□□ -0.46
CAST-239ENST00000513666 CYP4F22Q6NT55 531 aa12.17□□□□□ -0.46
CAST-239ENST00000513666 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
CAST-239ENST00000513666 SYNE4Q8N205 404 aa12.17□□□□□ -0.46
CAST-239ENST00000513666 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
CAST-239ENST00000513666 FMR1Q06787 632 aaKnown RBP eCLIP12.16□□□□□ -0.463e-6■■■■□ 26.1
CAST-239ENST00000513666 IL17REQ8NFR9 667 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 JDP2Q8WYK2 163 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 PSMD1Q99460 953 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 TIMELESSQ9UNS1 1208 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 SNED1Q8TER0 1413 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
CAST-239ENST00000513666 ALDH1B1P30837 517 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 MAP2K2P36507 400 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 GRM1Q13255 1194 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 TPTE2Q6XPS3 522 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 TLL2Q9Y6L7 1015 aa12.16□□□□□ -0.46
CAST-239ENST00000513666 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.46
CAST-239ENST00000513666 COL4A5P29400 1685 aa12.15□□□□□ -0.46
CAST-239ENST00000513666 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
CAST-239ENST00000513666 DIAPH1O60610 1272 aaKnown RBP12.15□□□□□ -0.46
CAST-239ENST00000513666 EIF6P56537 245 aaKnown RBP12.15□□□□□ -0.46
CAST-239ENST00000513666 CST9Q5W186 159 aa12.15□□□□□ -0.46
CAST-239ENST00000513666 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
CAST-239ENST00000513666 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.46
CAST-239ENST00000513666 RGL2O15211 777 aa12.14□□□□□ -0.47
CAST-239ENST00000513666 CA12O43570 354 aa12.14□□□□□ -0.47
CAST-239ENST00000513666 AOC2O75106 756 aa12.14□□□□□ -0.47
CAST-239ENST00000513666 SCNN1DP51172 638 aa12.14□□□□□ -0.47
CAST-239ENST00000513666 CLCN6P51797 869 aa12.14□□□□□ -0.47
CAST-239ENST00000513666 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
CAST-239ENST00000513666 GAS2L2Q8NHY3 880 aa12.14□□□□□ -0.47
CAST-239ENST00000513666 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
CAST-239ENST00000513666 PDE4DIPQ5VU43 2346 aa12.14□□□□□ -0.47
CAST-239ENST00000513666 CASP8AP2Q9UKL3 1982 aa12.13□□□□□ -0.47
CAST-239ENST00000513666 CEMIPQ8WUJ3 1361 aa12.13□□□□□ -0.47
CAST-239ENST00000513666 TRAF5O00463 557 aa12.13□□□□□ -0.47
CAST-239ENST00000513666 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
CAST-239ENST00000513666 EPS15P42566 896 aa12.13□□□□□ -0.47
CAST-239ENST00000513666 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
CAST-239ENST00000513666 USP50Q70EL3 339 aaPredicted RBP12.13□□□□□ -0.47
CAST-239ENST00000513666 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
CAST-239ENST00000513666 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
CAST-239ENST00000513666 KCNQ3O43525 872 aa12.12□□□□□ -0.47
CAST-239ENST00000513666 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
CAST-239ENST00000513666 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
CAST-239ENST00000513666 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
CAST-239ENST00000513666 CRY2Q49AN0 593 aa12.11□□□□□ -0.47
CAST-239ENST00000513666 FAM177BA6PVY3 158 aa12.11□□□□□ -0.47
CAST-239ENST00000513666 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
CAST-239ENST00000513666 SAPCD2Q86UD0 394 aa12.11□□□□□ -0.47
CAST-239ENST00000513666 HHIPL1Q96JK4 782 aa12.11□□□□□ -0.47
CAST-239ENST00000513666 COL3A1P02461 1466 aaPredicted RBP12.1□□□□□ -0.47
CAST-239ENST00000513666 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
CAST-239ENST00000513666 DGKZQ13574 1117 aa12.1□□□□□ -0.47
CAST-239ENST00000513666 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
CAST-239ENST00000513666 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
CAST-239ENST00000513666 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
CAST-239ENST00000513666 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
CAST-239ENST00000513666 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
CAST-239ENST00000513666 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
CAST-239ENST00000513666 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
CAST-239ENST00000513666 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
CAST-239ENST00000513666 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
CAST-239ENST00000513666 ADARB2Q9NS39 739 aaKnown RBP12.09□□□□□ -0.47
CAST-239ENST00000513666 ABCC12Q96J65 1359 aa12.09□□□□□ -0.47
CAST-239ENST00000513666 HOXA10P31260 410 aaPredicted RBP12.08□□□□□ -0.48
CAST-239ENST00000513666 HLFQ16534 295 aa12.08□□□□□ -0.48
CAST-239ENST00000513666 NIM1KQ8IY84 436 aa12.08□□□□□ -0.48
CAST-239ENST00000513666 GPRC5DQ9NZD1 345 aa12.08□□□□□ -0.48
CAST-239ENST00000513666 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
CAST-239ENST00000513666 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
CAST-239ENST00000513666 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
CAST-239ENST00000513666 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
CAST-239ENST00000513666 RPGRQ92834 1020 aaKnown RBP12.06□□□□□ -0.48
CAST-239ENST00000513666 GLIS2Q9BZE0 524 aaPredicted RBP12.06□□□□□ -0.48
CAST-239ENST00000513666 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
CAST-239ENST00000513666 KIF7Q2M1P5 1343 aa12.06□□□□□ -0.48
CAST-239ENST00000513666 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
CAST-239ENST00000513666 NUP98P52948 1817 aa12.06□□□□□ -0.48
CAST-239ENST00000513666 NPC1L1Q9UHC9 1359 aa12.06□□□□□ -0.48
CAST-239ENST00000513666 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
CAST-239ENST00000513666 PPIP5K2O43314 1243 aa12.05□□□□□ -0.48
CAST-239ENST00000513666 NOGQ13253 232 aa12.05□□□□□ -0.48
CAST-239ENST00000513666 SLC51AQ86UW1 340 aa12.05□□□□□ -0.48
CAST-239ENST00000513666 PHACTR3Q96KR7 559 aa12.05□□□□□ -0.48
CAST-239ENST00000513666 CRAMP1Q96RY5 1269 aa12.05□□□□□ -0.48
CAST-239ENST00000513666 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
CAST-239ENST00000513666 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
CAST-239ENST00000513666 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
CAST-239ENST00000513666 CXCL9Q07325 125 aa12.04□□□□□ -0.48
CAST-239ENST00000513666 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
CAST-239ENST00000513666 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
CAST-239ENST00000513666 CDHR2Q9BYE9 1310 aa12.04□□□□□ -0.48
CAST-239ENST00000513666 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
CAST-239ENST00000513666 PER1O15534 1290 aaPredicted RBP12.03□□□□□ -0.48
CAST-239ENST00000513666 GMPSP49915 693 aaPredicted RBP12.03□□□□□ -0.48
CAST-239ENST00000513666 AOC3Q16853 763 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms