RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 AIMP1Q12904 312 aaKnown RBP9.48□□□□□ -0.89
HTT-212ENST00000513639 TCIRG1Q13488 830 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 CRAMP1Q96RY5 1269 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 HYPKQ9NX55 129 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 RNF123Q5XPI4 1314 aa9.48□□□□□ -0.89
HTT-212ENST00000513639 IQCA1LA6NCM1 817 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 BBOX1O75936 387 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 HDGFL1Q5TGJ6 251 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 LRP10Q7Z4F1 713 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 SYNE4Q8N205 404 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 XAGE3Q8WTP9 111 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 JDP2Q8WYK2 163 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 NECTIN2Q92692 538 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 PSMD1Q99460 953 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 IFT57Q9NWB7 429 aa9.47□□□□□ -0.89
HTT-212ENST00000513639 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
HTT-212ENST00000513639 BRCA1P38398 1863 aaKnown RBP9.47□□□□□ -0.89
HTT-212ENST00000513639 NTSR2O95665 410 aa9.46□□□□□ -0.9
HTT-212ENST00000513639 ZNF853P0CG23 659 aa9.46□□□□□ -0.9
HTT-212ENST00000513639 HSP90B1P14625 803 aaKnown RBP9.46□□□□□ -0.9
HTT-212ENST00000513639 PROSER3Q2NL68 480 aa9.46□□□□□ -0.9
HTT-212ENST00000513639 DUSP27Q5VZP5 1158 aa9.46□□□□□ -0.9
HTT-212ENST00000513639 PLBD2Q8NHP8 589 aa9.46□□□□□ -0.9
HTT-212ENST00000513639 VPS33BQ9H267 617 aa9.46□□□□□ -0.9
HTT-212ENST00000513639 TRMT112Q9UI30 125 aaKnown RBP9.46□□□□□ -0.9
HTT-212ENST00000513639 ANP32CO43423 234 aa9.45□□□□□ -0.9
HTT-212ENST00000513639 ANXA1P04083 346 aa9.45□□□□□ -0.9
HTT-212ENST00000513639 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
HTT-212ENST00000513639 DNAJC5GQ8N7S2 189 aa9.45□□□□□ -0.9
HTT-212ENST00000513639 ZNF277Q9NRM2 450 aaPredicted RBP9.45□□□□□ -0.9
HTT-212ENST00000513639 MBIPQ9NS73 344 aa9.45□□□□□ -0.9
HTT-212ENST00000513639 CHPF2Q9P2E5 772 aa9.45□□□□□ -0.9
HTT-212ENST00000513639 UBN2Q6ZU65 1347 aa9.45□□□□□ -0.9
HTT-212ENST00000513639 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
HTT-212ENST00000513639 POTECB2RU33 542 aa9.44□□□□□ -0.9
HTT-212ENST00000513639 DDNO94850 711 aaPredicted RBP9.44□□□□□ -0.9
HTT-212ENST00000513639 IARSP41252 1262 aaKnown RBP9.44□□□□□ -0.9
HTT-212ENST00000513639 TRIM28Q13263 835 aaKnown RBP9.44□□□□□ -0.9
HTT-212ENST00000513639 KRT24Q2M2I5 525 aa9.44□□□□□ -0.9
HTT-212ENST00000513639 DDX46Q7L014 1031 aaKnown RBP9.44□□□□□ -0.9
HTT-212ENST00000513639 TMC4Q7Z404 712 aa9.44□□□□□ -0.9
HTT-212ENST00000513639 SUPT20HQ8NEM7 779 aa9.44□□□□□ -0.9
HTT-212ENST00000513639 L3MBTL3Q96JM7 780 aaPredicted RBP9.44□□□□□ -0.9
HTT-212ENST00000513639 SH3TC1Q8TE82 1336 aa9.44□□□□□ -0.9
HTT-212ENST00000513639 SBF1O95248 1867 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 SCN7AQ01118 1682 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 RIC1Q4ADV7 1423 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 FZD9O00144 591 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
HTT-212ENST00000513639 EIF6P56537 245 aaKnown RBP9.43□□□□□ -0.9
HTT-212ENST00000513639 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 CCDC30Q5VVM6 783 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 OLFM4Q6UX06 510 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 PNMA8AQ86V59 439 aaPredicted RBP9.43□□□□□ -0.9
HTT-212ENST00000513639 SP8Q8IXZ3 490 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 GPC2Q8N158 579 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 DLG5Q8TDM6 1919 aa9.43□□□□□ -0.9
HTT-212ENST00000513639 ELL2O00472 640 aaPredicted RBP9.42□□□□□ -0.9
HTT-212ENST00000513639 TCERG1O14776 1098 aaKnown RBP9.42□□□□□ -0.9
HTT-212ENST00000513639 DDX58O95786 925 aaKnown RBP9.42□□□□□ -0.9
HTT-212ENST00000513639 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
HTT-212ENST00000513639 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
HTT-212ENST00000513639 LARGE2Q8N3Y3 721 aa9.42□□□□□ -0.9
HTT-212ENST00000513639 ISCA1Q9BUE6 129 aa9.42□□□□□ -0.9
HTT-212ENST00000513639 HACL1Q9UJ83 578 aa9.42□□□□□ -0.9
HTT-212ENST00000513639 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
HTT-212ENST00000513639 ABCC12Q96J65 1359 aa9.41□□□□□ -0.9
HTT-212ENST00000513639 SLX4Q8IY92 1834 aa9.41□□□□□ -0.9
HTT-212ENST00000513639 DPP8Q6V1X1 898 aaPredicted RBP9.41□□□□□ -0.9
HTT-212ENST00000513639 LDHDQ86WU2 507 aa9.41□□□□□ -0.9
HTT-212ENST00000513639 MPNDQ8N594 471 aa9.41□□□□□ -0.9
HTT-212ENST00000513639 KLRG1Q96E93 195 aa9.41□□□□□ -0.9
HTT-212ENST00000513639 TAF1DQ9H5J8 278 aaPredicted RBP9.41□□□□□ -0.9
HTT-212ENST00000513639 PCNTO95613 3336 aa9.41□□□□□ -0.9
HTT-212ENST00000513639 ANKRD31Q8N7Z5 1873 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 DLEC1Q9Y238 1755 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 ATP5J2-PTCD1G3V325 749 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 LMOD1P29536 600 aaPredicted RBP9.4□□□□□ -0.9
HTT-212ENST00000513639 GRAPQ13588 217 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 SF3B3Q15393 1217 aaKnown RBP9.4□□□□□ -0.9
HTT-212ENST00000513639 C3orf67Q6ZVT6 689 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 WWC1Q8IX03 1113 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 NIM1KQ8IY84 436 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 ZBTB38Q8NAP3 1195 aaPredicted RBP9.4□□□□□ -0.9
HTT-212ENST00000513639 C8orf58Q8NAV2 365 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 CCDC191Q8NCU4 936 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
HTT-212ENST00000513639 FAM89AQ96GI7 184 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 STK31Q9BXU1 1019 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 RTFDC1Q9BY42 306 aaPredicted RBP9.4□□□□□ -0.9
HTT-212ENST00000513639 MRS2Q9HD23 443 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 CLEC11AQ9Y240 323 aa9.4□□□□□ -0.9
HTT-212ENST00000513639 BCORQ6W2J9 1755 aa9.4□□□□□ -0.91
HTT-212ENST00000513639 ABCC4O15439 1325 aa9.39□□□□□ -0.91
HTT-212ENST00000513639 IL16Q14005 1332 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms