RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 TYRO3Q06418 890 aa8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 USP17L2Q6R6M4 530 aa8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 C20orf204Q6ZNR8 217 aa8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 USP17L1Q7RTZ2 530 aa8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 TXNRD3Q86VQ6 643 aa8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 PLEKHM2Q8IWE5 1019 aa8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 ZNF280CQ8ND82 737 aa8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 CHMP7Q8WUX9 453 aaPredicted RBP8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 NGLY1Q96IV0 654 aa8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
ATP2C1-220ENST00000513636 M0R2N6 131 aa8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 RGS9O75916 674 aaPredicted RBP8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 H2AFB1P0C5Y9 115 aa8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 H2AFB2P0C5Z0 115 aa8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 HIRAP54198 1017 aaPredicted RBP8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 ALDH16A1Q8IZ83 802 aa8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 KRTAP9-9Q9BYP9 154 aa8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 KRTAP9-4Q9BYQ2 154 aa8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 SLC6A14Q9UN76 642 aa8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 KIAA1024Q9UPX6 916 aa8.05□□□□□ -1.12
ATP2C1-220ENST00000513636 CLDN10P78369 228 aa8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 MBTPS1Q14703 1052 aa8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 HDGFL1Q5TGJ6 251 aa8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 BTLAQ7Z6A9 289 aa8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 TSEN2Q8NCE0 465 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 TP53INP1Q96A56 240 aa8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 LENG1Q96BZ8 264 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 ZNF594Q96JF6 807 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 ATAD2Q6PL18 1390 aa8.04□□□□□ -1.12
ATP2C1-220ENST00000513636 ATP9BO43861 1147 aa8.03□□□□□ -1.12
ATP2C1-220ENST00000513636 SELPP16109 830 aa8.03□□□□□ -1.12
ATP2C1-220ENST00000513636 UBTFP17480 764 aaKnown RBP8.03□□□□□ -1.12
ATP2C1-220ENST00000513636 PCSK7Q16549 785 aa8.03□□□□□ -1.12
ATP2C1-220ENST00000513636 PSAPL1Q6NUJ1 521 aa8.03□□□□□ -1.12
ATP2C1-220ENST00000513636 DMRTC2Q8IXT2 367 aaPredicted RBP8.03□□□□□ -1.12
ATP2C1-220ENST00000513636 EPB42P16452 691 aa8.02□□□□□ -1.13
ATP2C1-220ENST00000513636 CCINQ13939 588 aa8.02□□□□□ -1.13
ATP2C1-220ENST00000513636 FOXD4L6Q3SYB3 417 aaPredicted RBP8.02□□□□□ -1.13
ATP2C1-220ENST00000513636 FOXD4L3Q6VB84 417 aaPredicted RBP8.02□□□□□ -1.13
ATP2C1-220ENST00000513636 GAS2L2Q8NHY3 880 aa8.02□□□□□ -1.13
ATP2C1-220ENST00000513636 SCG3Q8WXD2 468 aaKnown RBP8.02□□□□□ -1.13
ATP2C1-220ENST00000513636 DNAJB12Q9NXW2 375 aaKnown RBP8.02□□□□□ -1.13
ATP2C1-220ENST00000513636 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.02□□□□□ -1.13
ATP2C1-220ENST00000513636 RASA1P20936 1047 aa8.01□□□□□ -1.13
ATP2C1-220ENST00000513636 SHISA2Q6UWI4 295 aa8.01□□□□□ -1.13
ATP2C1-220ENST00000513636 POM121Q96HA1 1249 aa8.01□□□□□ -1.13
ATP2C1-220ENST00000513636 HINFPQ9BQA5 517 aa8.01□□□□□ -1.13
ATP2C1-220ENST00000513636 SIX5Q8N196 739 aa8□□□□□ -1.13
ATP2C1-220ENST00000513636 POM121CA8CG34 1229 aa7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 NFKB1P19838 968 aa7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 AFF1P51825 1210 aaKnown RBP7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 SEC13P55735 322 aa7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 FLIIQ13045 1269 aa7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 LRP8Q14114 963 aa7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 POTEAQ6S8J7 498 aa7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 FAM35AQ86V20 835 aa7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 FMR1NBQ8N0W7 255 aaPredicted RBP7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 STAG2Q8N3U4 1231 aa7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 C2orf49Q9BVC5 232 aaPredicted RBP7.99□□□□□ -1.13
ATP2C1-220ENST00000513636 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
ATP2C1-220ENST00000513636 LARP1Q6PKG0 1096 aaKnown RBP7.98□□□□□ -1.13
ATP2C1-220ENST00000513636 GSX2Q9BZM3 304 aa7.98□□□□□ -1.13
ATP2C1-220ENST00000513636 CPB1P15086 417 aa7.97□□□□□ -1.13
ATP2C1-220ENST00000513636 ARID4AP29374 1257 aaPredicted RBP7.97□□□□□ -1.13
ATP2C1-220ENST00000513636 RTN1Q16799 776 aa7.97□□□□□ -1.13
ATP2C1-220ENST00000513636 MSL1Q68DK7 614 aa7.97□□□□□ -1.13
ATP2C1-220ENST00000513636 ELMSAN1Q6PJG2 1045 aa7.97□□□□□ -1.13
ATP2C1-220ENST00000513636 TGFBR3LH3BV60 316 aa7.96□□□□□ -1.14
ATP2C1-220ENST00000513636 C21orf2O43822 256 aa7.96□□□□□ -1.14
ATP2C1-220ENST00000513636 IER5Q5VY09 327 aa7.96□□□□□ -1.14
ATP2C1-220ENST00000513636 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.14
ATP2C1-220ENST00000513636 DTWD1Q8N5C7 304 aa7.96□□□□□ -1.14
ATP2C1-220ENST00000513636 GOLGA2P5Q9HBQ8 144 aa7.96□□□□□ -1.14
ATP2C1-220ENST00000513636 HYAL3O43820 417 aaPredicted RBP7.95□□□□□ -1.14
ATP2C1-220ENST00000513636 ADAMTS19Q8TE59 1207 aa7.95□□□□□ -1.14
ATP2C1-220ENST00000513636 IREB2P48200 963 aaKnown RBP7.94□□□□□ -1.14
ATP2C1-220ENST00000513636 KRT25Q7Z3Z0 450 aa7.94□□□□□ -1.14
ATP2C1-220ENST00000513636 WFDC12Q8WWY7 111 aa7.94□□□□□ -1.14
ATP2C1-220ENST00000513636 VTI1AQ96AJ9 217 aa7.94□□□□□ -1.14
ATP2C1-220ENST00000513636 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
ATP2C1-220ENST00000513636 FBXO11Q86XK2 927 aa7.93□□□□□ -1.14
ATP2C1-220ENST00000513636 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
ATP2C1-220ENST00000513636 FRRS1LQ9P0K9 344 aa7.93□□□□□ -1.14
ATP2C1-220ENST00000513636 TFIP11Q9UBB9 837 aaKnown RBP7.93□□□□□ -1.14
ATP2C1-220ENST00000513636 NAGPAQ9UK23 515 aa7.93□□□□□ -1.14
ATP2C1-220ENST00000513636 IGF2-ASQ6U949 168 aa7.92□□□□□ -1.14
ATP2C1-220ENST00000513636 DHX32Q7L7V1 743 aaKnown RBP7.92□□□□□ -1.14
ATP2C1-220ENST00000513636 MAP3K6O95382 1288 aa7.91□□□□□ -1.14
ATP2C1-220ENST00000513636 RARAP10276 462 aa7.91□□□□□ -1.14
ATP2C1-220ENST00000513636 IDH3AP50213 366 aa7.91□□□□□ -1.14
ATP2C1-220ENST00000513636 TARSP26639 723 aaKnown RBP7.9□□□□□ -1.14
ATP2C1-220ENST00000513636 ARSDP51689 593 aa7.9□□□□□ -1.14
ATP2C1-220ENST00000513636 MLLT1Q03111 559 aaPredicted RBP7.9□□□□□ -1.14
ATP2C1-220ENST00000513636 PERM1Q5SV97 790 aa7.9□□□□□ -1.14
ATP2C1-220ENST00000513636 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATP2C1-220ENST00000513636 LGR5O75473 907 aa7.89□□□□□ -1.15
ATP2C1-220ENST00000513636 SASH3O75995 380 aa7.89□□□□□ -1.15
ATP2C1-220ENST00000513636 IGFBP4P22692 258 aa7.89□□□□□ -1.15
ATP2C1-220ENST00000513636 TRPM4Q8TD43 1214 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms