RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 ZNF219Q9P2Y4 722 aaPredicted RBP22.86■■□□□ 1.25
DDR1-272ENST00000513243 TNRC6CQ9HCJ0 1690 aaKnown RBP22.86■■□□□ 1.25
DDR1-272ENST00000513243 RIC1Q4ADV7 1423 aa22.85■■□□□ 1.25
DDR1-272ENST00000513243 SLC10A5Q5PT55 438 aa22.85■■□□□ 1.25
DDR1-272ENST00000513243 RIC3Q7Z5B4 369 aa22.85■■□□□ 1.25
DDR1-272ENST00000513243 ISCA1Q9BUE6 129 aa22.85■■□□□ 1.25
DDR1-272ENST00000513243 ANKRD36CQ5JPF3 1778 aa22.85■■□□□ 1.25
DDR1-272ENST00000513243 ATP5J2-PTCD1G3V325 749 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 VAMP4O75379 141 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 RASSF7Q02833 373 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 C9orf131Q5VYM1 1079 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 C3orf67Q6ZVT6 689 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 SYNE4Q8N205 404 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 ZNF428Q96B54 188 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 STK31Q9BXU1 1019 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 MYH16Q9H6N6 1097 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 SLX4Q8IY92 1834 aa22.84■■□□□ 1.25
DDR1-272ENST00000513243 TRMT112Q9UI30 125 aaKnown RBP22.83■■□□□ 1.25
DDR1-272ENST00000513243 RNF123Q5XPI4 1314 aa22.82■■□□□ 1.24
DDR1-272ENST00000513243 NFKBIEO00221 500 aa22.82■■□□□ 1.24
DDR1-272ENST00000513243 MIER1Q8N108 512 aa22.82■■□□□ 1.24
DDR1-272ENST00000513243 C7orf43Q8WVR3 580 aa22.82■■□□□ 1.24
DDR1-272ENST00000513243 SLC4A2P04920 1241 aa22.81■■□□□ 1.24
DDR1-272ENST00000513243 ALDH1B1P30837 517 aa22.81■■□□□ 1.24
DDR1-272ENST00000513243 PRELPP51888 382 aa22.81■■□□□ 1.24
DDR1-272ENST00000513243 TRIM28Q13263 835 aaKnown RBP22.81■■□□□ 1.24
DDR1-272ENST00000513243 RNF181Q9P0P0 153 aa22.81■■□□□ 1.24
DDR1-272ENST00000513243 SH3TC1Q8TE82 1336 aa22.81■■□□□ 1.24
DDR1-272ENST00000513243 DDX58O95786 925 aaKnown RBP22.8■■□□□ 1.24
DDR1-272ENST00000513243 HCLS1P14317 486 aaPredicted RBP22.8■■□□□ 1.24
DDR1-272ENST00000513243 HOXA10P31260 410 aaPredicted RBP22.8■■□□□ 1.24
DDR1-272ENST00000513243 G2E3Q7L622 706 aa22.8■■□□□ 1.24
DDR1-272ENST00000513243 RPGRQ92834 1020 aaKnown RBP22.8■■□□□ 1.24
DDR1-272ENST00000513243 NLRP3Q96P20 1036 aa22.8■■□□□ 1.24
DDR1-272ENST00000513243 ARFGEF2Q9Y6D5 1785 aa22.8■■□□□ 1.24
DDR1-272ENST00000513243 ZNF526Q8TF50 670 aaPredicted RBP22.79■■□□□ 1.24
DDR1-272ENST00000513243 MYD88Q99836 296 aa22.79■■□□□ 1.24
DDR1-272ENST00000513243 CACNA1SQ13698 1873 aa22.79■■□□□ 1.24
DDR1-272ENST00000513243 LMNB1P20700 586 aa22.78■■□□□ 1.24
DDR1-272ENST00000513243 SOGA3Q5TF21 947 aa22.78■■□□□ 1.24
DDR1-272ENST00000513243 KSR2Q6VAB6 950 aa22.78■■□□□ 1.24
DDR1-272ENST00000513243 METTL22Q9BUU2 404 aaPredicted RBP22.78■■□□□ 1.24
DDR1-272ENST00000513243 MAP3K2Q9Y2U5 619 aa22.78■■□□□ 1.24
DDR1-272ENST00000513243 SBF1O95248 1867 aa22.77■■□□□ 1.24
DDR1-272ENST00000513243 PI4KAP2A4QPH2 592 aa22.77■■□□□ 1.24
DDR1-272ENST00000513243 OLFM4Q6UX06 510 aa22.77■■□□□ 1.24
DDR1-272ENST00000513243 PI4KAP1Q8N8J0 262 aa22.77■■□□□ 1.24
DDR1-272ENST00000513243 FAM89AQ96GI7 184 aa22.77■■□□□ 1.24
DDR1-272ENST00000513243 RBM17Q96I25 401 aaKnown RBP22.77■■□□□ 1.24
DDR1-272ENST00000513243 CRAMP1Q96RY5 1269 aa22.76■■□□□ 1.23
DDR1-272ENST00000513243 GPBP1L1Q9HC44 474 aaPredicted RBP22.76■■□□□ 1.23
DDR1-272ENST00000513243 CCDC93Q567U6 631 aa22.75■■□□□ 1.23
DDR1-272ENST00000513243 RTL5Q5HYW3 569 aaPredicted RBP22.75■■□□□ 1.23
DDR1-272ENST00000513243 TAOK3Q9H2K8 898 aa22.75■■□□□ 1.23
DDR1-272ENST00000513243 FER1L6Q2WGJ9 1857 aa22.75■■□□□ 1.23
DDR1-272ENST00000513243 E9PSI1 815 aa22.74■■□□□ 1.23
DDR1-272ENST00000513243 FLIIQ13045 1269 aa22.74■■□□□ 1.23
DDR1-272ENST00000513243 CCDC191Q8NCU4 936 aa22.74■■□□□ 1.23
DDR1-272ENST00000513243 LTBP3Q9NS15 1303 aa22.74■■□□□ 1.23
DDR1-272ENST00000513243 SLFN5Q08AF3 891 aa22.73■■□□□ 1.23
DDR1-272ENST00000513243 ZBTB38Q8NAP3 1195 aaPredicted RBP22.73■■□□□ 1.23
DDR1-272ENST00000513243 IGKV5-2P06315 115 aa22.72■■□□□ 1.23
DDR1-272ENST00000513243 CDCA7LQ96GN5 454 aa22.72■■□□□ 1.23
DDR1-272ENST00000513243 CWC25Q9NXE8 425 aaPredicted RBP22.72■■□□□ 1.23
DDR1-272ENST00000513243 IRS4O14654 1257 aaPredicted RBP22.71■■□□□ 1.23
DDR1-272ENST00000513243 FKBP5Q13451 457 aaPredicted RBP22.71■■□□□ 1.23
DDR1-272ENST00000513243 RTKN2Q8IZC4 609 aa22.71■■□□□ 1.23
DDR1-272ENST00000513243 ABCC4O15439 1325 aa22.71■■□□□ 1.23
DDR1-272ENST00000513243 LAMB2P55268 1798 aa22.71■■□□□ 1.23
DDR1-272ENST00000513243 PPEF1O14829 653 aaPredicted RBP22.7■■□□□ 1.22
DDR1-272ENST00000513243 PCCAP05165 728 aaPredicted RBP22.7■■□□□ 1.22
DDR1-272ENST00000513243 SLC51AQ86UW1 340 aa22.7■■□□□ 1.22
DDR1-272ENST00000513243 JARID2Q92833 1246 aaPredicted RBP22.7■■□□□ 1.22
DDR1-272ENST00000513243 DDX60Q8IY21 1712 aaKnown RBP22.69■■□□□ 1.22
DDR1-272ENST00000513243 ZC3H4Q9UPT8 1303 aaKnown RBP22.69■■□□□ 1.22
DDR1-272ENST00000513243 FKBP4Q02790 459 aaKnown RBP eCLIP22.69■■□□□ 1.22
DDR1-272ENST00000513243 NEXNQ0ZGT2 675 aa22.69■■□□□ 1.22
DDR1-272ENST00000513243 SF3B3Q15393 1217 aaKnown RBP22.69■■□□□ 1.22
DDR1-272ENST00000513243 CC2D2BQ6DHV5 1058 aa22.69■■□□□ 1.22
DDR1-272ENST00000513243 CCDC88AQ3V6T2 1871 aa22.68■■□□□ 1.22
DDR1-272ENST00000513243 SNED1Q8TER0 1413 aa22.68■■□□□ 1.22
DDR1-272ENST00000513243 CWF19L2Q2TBE0 894 aaKnown RBP22.68■■□□□ 1.22
DDR1-272ENST00000513243 DDX46Q7L014 1031 aaKnown RBP22.68■■□□□ 1.22
DDR1-272ENST00000513243 CACNA1FO60840 1977 aa22.68■■□□□ 1.22
DDR1-272ENST00000513243 NEURL1BA8MQ27 555 aa22.67■■□□□ 1.22
DDR1-272ENST00000513243 BBOX1O75936 387 aa22.67■■□□□ 1.22
DDR1-272ENST00000513243 TRMT2AQ8IZ69 625 aaKnown RBP22.67■■□□□ 1.22
DDR1-272ENST00000513243 DNAAF4Q8WXU2 420 aa22.67■■□□□ 1.22
DDR1-272ENST00000513243 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
DDR1-272ENST00000513243 ATP6V0A2Q9Y487 856 aa22.67■■□□□ 1.22
DDR1-272ENST00000513243 GRAPQ13588 217 aa22.66■■□□□ 1.22
DDR1-272ENST00000513243 GRAPLQ8TC17 118 aaPredicted RBP22.66■■□□□ 1.22
DDR1-272ENST00000513243 NMRK2Q9NPI5 230 aa22.66■■□□□ 1.22
DDR1-272ENST00000513243 KIF3CO14782 793 aa22.65■■□□□ 1.22
DDR1-272ENST00000513243 KDM2BQ8NHM5 1336 aa22.64■■□□□ 1.22
DDR1-272ENST00000513243 F6X3S4 739 aa22.64■■□□□ 1.21
DDR1-272ENST00000513243 HSP90B1P14625 803 aaKnown RBP22.64■■□□□ 1.21
DDR1-272ENST00000513243 GRIPAP1Q4V328 841 aa22.64■■□□□ 1.21
DDR1-272ENST00000513243 PSMD1Q99460 953 aa22.64■■□□□ 1.21
DDR1-272ENST00000513243 CDHR2Q9BYE9 1310 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms