RNA–Protein interactions for RNA: ENST00000513080.5

SPOP-218, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-218ENST00000513080 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
SPOP-218ENST00000513080 NLRP10Q86W26 655 aa18.8■□□□□ 0.6
SPOP-218ENST00000513080 GOLGA2Q08379 1002 aa18.79■□□□□ 0.6
SPOP-218ENST00000513080 SPINK5Q9NQ38 1064 aaPredicted RBP18.79■□□□□ 0.6
SPOP-218ENST00000513080 RIC1Q4ADV7 1423 aa18.78■□□□□ 0.6
SPOP-218ENST00000513080 TCERG1O14776 1098 aaKnown RBP18.78■□□□□ 0.6
SPOP-218ENST00000513080 RASSF7Q02833 373 aa18.78■□□□□ 0.6
SPOP-218ENST00000513080 CRY2Q49AN0 593 aa18.78■□□□□ 0.6
SPOP-218ENST00000513080 RIC3Q7Z5B4 369 aa18.78■□□□□ 0.6
SPOP-218ENST00000513080 ZNF526Q8TF50 670 aaPredicted RBP18.78■□□□□ 0.6
SPOP-218ENST00000513080 ATP5J2-PTCD1G3V325 749 aa18.77■□□□□ 0.6
SPOP-218ENST00000513080 SLC10A5Q5PT55 438 aa18.77■□□□□ 0.6
SPOP-218ENST00000513080 ISCA1Q9BUE6 129 aa18.77■□□□□ 0.6
SPOP-218ENST00000513080 STK31Q9BXU1 1019 aa18.77■□□□□ 0.6
SPOP-218ENST00000513080 RNF181Q9P0P0 153 aa18.77■□□□□ 0.6
SPOP-218ENST00000513080 RNF123Q5XPI4 1314 aa18.76■□□□□ 0.59
SPOP-218ENST00000513080 CCDC88AQ3V6T2 1871 aa18.76■□□□□ 0.59
SPOP-218ENST00000513080 NFKBIEO00221 500 aa18.76■□□□□ 0.59
SPOP-218ENST00000513080 ALDH1B1P30837 517 aa18.76■□□□□ 0.59
SPOP-218ENST00000513080 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
SPOP-218ENST00000513080 ZNF428Q96B54 188 aa18.76■□□□□ 0.59
SPOP-218ENST00000513080 NLRP3Q96P20 1036 aa18.76■□□□□ 0.59
SPOP-218ENST00000513080 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
SPOP-218ENST00000513080 TRMT112Q9UI30 125 aaKnown RBP18.76■□□□□ 0.59
SPOP-218ENST00000513080 FER1L6Q2WGJ9 1857 aa18.75■□□□□ 0.59
SPOP-218ENST00000513080 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
SPOP-218ENST00000513080 C3orf67Q6ZVT6 689 aa18.75■□□□□ 0.59
SPOP-218ENST00000513080 SYNE4Q8N205 404 aa18.75■□□□□ 0.59
SPOP-218ENST00000513080 C7orf43Q8WVR3 580 aa18.75■□□□□ 0.59
SPOP-218ENST00000513080 RPGRQ92834 1020 aaKnown RBP18.75■□□□□ 0.59
SPOP-218ENST00000513080 GPBP1L1Q9HC44 474 aaPredicted RBP18.75■□□□□ 0.59
SPOP-218ENST00000513080 SH3TC1Q8TE82 1336 aa18.74■□□□□ 0.59
SPOP-218ENST00000513080 ZNF521Q96K83 1311 aa18.74■□□□□ 0.59
SPOP-218ENST00000513080 VAMP4O75379 141 aa18.74■□□□□ 0.59
SPOP-218ENST00000513080 DDX58O95786 925 aaKnown RBP18.74■□□□□ 0.59
SPOP-218ENST00000513080 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
SPOP-218ENST00000513080 LMNB1P20700 586 aa18.74■□□□□ 0.59
SPOP-218ENST00000513080 HOXA10P31260 410 aaPredicted RBP18.74■□□□□ 0.59
SPOP-218ENST00000513080 PRELPP51888 382 aa18.74■□□□□ 0.59
SPOP-218ENST00000513080 SOGA3Q5TF21 947 aa18.74■□□□□ 0.59
SPOP-218ENST00000513080 HCLS1P14317 486 aaPredicted RBP18.73■□□□□ 0.59
SPOP-218ENST00000513080 TRIM28Q13263 835 aaKnown RBP18.73■□□□□ 0.59
SPOP-218ENST00000513080 RBM17Q96I25 401 aaKnown RBP18.73■□□□□ 0.59
SPOP-218ENST00000513080 CCDC93Q567U6 631 aa18.72■□□□□ 0.59
SPOP-218ENST00000513080 G2E3Q7L622 706 aa18.72■□□□□ 0.59
SPOP-218ENST00000513080 FAM89AQ96GI7 184 aa18.72■□□□□ 0.59
SPOP-218ENST00000513080 MYD88Q99836 296 aa18.72■□□□□ 0.59
SPOP-218ENST00000513080 LAMB2P55268 1798 aa18.72■□□□□ 0.59
SPOP-218ENST00000513080 OLFM4Q6UX06 510 aa18.71■□□□□ 0.59
SPOP-218ENST00000513080 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
SPOP-218ENST00000513080 CRAMP1Q96RY5 1269 aa18.71■□□□□ 0.59
SPOP-218ENST00000513080 METTL22Q9BUU2 404 aaPredicted RBP18.71■□□□□ 0.59
SPOP-218ENST00000513080 TAOK3Q9H2K8 898 aa18.71■□□□□ 0.59
SPOP-218ENST00000513080 MAP3K2Q9Y2U5 619 aa18.71■□□□□ 0.59
SPOP-218ENST00000513080 CACNA1FO60840 1977 aa18.71■□□□□ 0.59
SPOP-218ENST00000513080 PI4KAP2A4QPH2 592 aa18.7■□□□□ 0.58
SPOP-218ENST00000513080 DDX60Q8IY21 1712 aaKnown RBP18.7■□□□□ 0.58
SPOP-218ENST00000513080 MIER1Q8N108 512 aa18.7■□□□□ 0.58
SPOP-218ENST00000513080 PI4KAP1Q8N8J0 262 aa18.7■□□□□ 0.58
SPOP-218ENST00000513080 LTBP3Q9NS15 1303 aa18.7■□□□□ 0.58
SPOP-218ENST00000513080 RTL5Q5HYW3 569 aaPredicted RBP18.69■□□□□ 0.58
SPOP-218ENST00000513080 DICER1Q9UPY3 1922 aaKnown RBP18.68■□□□□ 0.58
SPOP-218ENST00000513080 FLIIQ13045 1269 aa18.68■□□□□ 0.58
SPOP-218ENST00000513080 RTKN2Q8IZC4 609 aa18.68■□□□□ 0.58
SPOP-218ENST00000513080 CCDC191Q8NCU4 936 aa18.68■□□□□ 0.58
SPOP-218ENST00000513080 TIAM2Q8IVF5 1701 aa18.68■□□□□ 0.58
SPOP-218ENST00000513080 ZC3H4Q9UPT8 1303 aaKnown RBP18.68■□□□□ 0.58
SPOP-218ENST00000513080 PPEF1O14829 653 aaPredicted RBP18.67■□□□□ 0.58
SPOP-218ENST00000513080 ZBTB38Q8NAP3 1195 aaPredicted RBP18.67■□□□□ 0.58
SPOP-218ENST00000513080 CWC25Q9NXE8 425 aaPredicted RBP18.67■□□□□ 0.58
SPOP-218ENST00000513080 E9PSI1 815 aa18.66■□□□□ 0.58
SPOP-218ENST00000513080 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
SPOP-218ENST00000513080 FKBP4Q02790 459 aaKnown RBP eCLIP18.66■□□□□ 0.58
SPOP-218ENST00000513080 NEXNQ0ZGT2 675 aa18.66■□□□□ 0.58
SPOP-218ENST00000513080 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
SPOP-218ENST00000513080 CC2D2BQ6DHV5 1058 aa18.66■□□□□ 0.58
SPOP-218ENST00000513080 DDX46Q7L014 1031 aaKnown RBP18.66■□□□□ 0.58
SPOP-218ENST00000513080 ABCC4O15439 1325 aa18.66■□□□□ 0.58
SPOP-218ENST00000513080 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
SPOP-218ENST00000513080 TAF1P21675 1872 aa18.65■□□□□ 0.58
SPOP-218ENST00000513080 IGKV5-2P06315 115 aa18.65■□□□□ 0.58
SPOP-218ENST00000513080 C1QTNF8P60827 252 aa18.65■□□□□ 0.58
SPOP-218ENST00000513080 SLFN5Q08AF3 891 aa18.65■□□□□ 0.58
SPOP-218ENST00000513080 NMRK2Q9NPI5 230 aa18.65■□□□□ 0.58
SPOP-218ENST00000513080 KIF3CO14782 793 aa18.64■□□□□ 0.57
SPOP-218ENST00000513080 BBOX1O75936 387 aa18.64■□□□□ 0.57
SPOP-218ENST00000513080 PCCAP05165 728 aaPredicted RBP18.64■□□□□ 0.57
SPOP-218ENST00000513080 SF3B3Q15393 1217 aaKnown RBP18.64■□□□□ 0.57
SPOP-218ENST00000513080 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
SPOP-218ENST00000513080 ZNF277Q9NRM2 450 aaPredicted RBP18.64■□□□□ 0.57
SPOP-218ENST00000513080 GLTPD2A6NH11 291 aa18.63■□□□□ 0.57
SPOP-218ENST00000513080 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
SPOP-218ENST00000513080 GRAPQ13588 217 aa18.63■□□□□ 0.57
SPOP-218ENST00000513080 CWF19L2Q2TBE0 894 aaKnown RBP18.63■□□□□ 0.57
SPOP-218ENST00000513080 SLC51AQ86UW1 340 aa18.63■□□□□ 0.57
SPOP-218ENST00000513080 GRAPLQ8TC17 118 aaPredicted RBP18.63■□□□□ 0.57
SPOP-218ENST00000513080 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
SPOP-218ENST00000513080 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
SPOP-218ENST00000513080 ATP6V0A2Q9Y487 856 aa18.63■□□□□ 0.57
SPOP-218ENST00000513080 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms