RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 USP3Q9Y6I4 520 aa5.81□□□□□ -1.48
SUB1-212ENST00000513013 USP17L15C9J2P7 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L10C9JJH3 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L13C9JLJ4 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L12C9JPN9 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L11C9JVI0 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L21D6R901 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L18D6R9N7 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L22D6RA61 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L17D6RBQ6 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L19D6RCP7 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L20D6RJB6 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 M0R2N6 131 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 ARID4AP29374 1257 aaPredicted RBP5.8□□□□□ -1.48
SUB1-212ENST00000513013 USP17L24Q0WX57 530 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 LARP1Q6PKG0 1096 aaKnown RBP5.8□□□□□ -1.48
SUB1-212ENST00000513013 RHPN1Q8TCX5 695 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 ZDHHC1Q8WTX9 485 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 STK32AQ8WU08 396 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 CLP1Q92989 425 aaKnown RBP5.8□□□□□ -1.48
SUB1-212ENST00000513013 ZNF428Q96B54 188 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 PRDM6Q9NQX0 595 aa5.8□□□□□ -1.48
SUB1-212ENST00000513013 SSFA2P28290 1259 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 CHRNA4P43681 627 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 HIRAP54198 1017 aaPredicted RBP5.79□□□□□ -1.48
SUB1-212ENST00000513013 EPHA4P54764 986 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 CCDC102BQ68D86 513 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 TNS4Q8IZW8 715 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 LARGE2Q8N3Y3 721 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 TPCN2Q8NHX9 752 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 TNFRSF25Q93038 417 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 TRIM11Q96F44 468 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 EFCC1Q9HA90 598 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 STRN4Q9NRL3 753 aa5.79□□□□□ -1.48
SUB1-212ENST00000513013 MKRN1Q9UHC7 482 aaKnown RBP5.79□□□□□ -1.48
SUB1-212ENST00000513013 SPEM2Q0P670 501 aa5.78□□□□□ -1.48
SUB1-212ENST00000513013 TRIM28Q13263 835 aaKnown RBP5.78□□□□□ -1.48
SUB1-212ENST00000513013 PTK7Q13308 1070 aa5.78□□□□□ -1.48
SUB1-212ENST00000513013 SWI5Q1ZZU3 235 aa5.78□□□□□ -1.48
SUB1-212ENST00000513013 DEPDC4Q8N2C3 294 aa5.78□□□□□ -1.48
SUB1-212ENST00000513013 FAM200AQ8TCP9 573 aa5.78□□□□□ -1.48
SUB1-212ENST00000513013 CEP63Q96MT8 703 aa5.78□□□□□ -1.48
SUB1-212ENST00000513013 RBM47A0AV96 593 aaKnown RBP5.77□□□□□ -1.49
SUB1-212ENST00000513013 RASA1P20936 1047 aa5.77□□□□□ -1.49
SUB1-212ENST00000513013 KCNQ4P56696 695 aa5.77□□□□□ -1.49
SUB1-212ENST00000513013 CRTC2Q53ET0 693 aaPredicted RBP5.77□□□□□ -1.49
SUB1-212ENST00000513013 PHLDB3Q6NSJ2 640 aa5.77□□□□□ -1.49
SUB1-212ENST00000513013 Q8N3U1 123 aa5.77□□□□□ -1.49
SUB1-212ENST00000513013 GAS2L2Q8NHY3 880 aa5.77□□□□□ -1.49
SUB1-212ENST00000513013 SEMA6BQ9H3T3 888 aa5.77□□□□□ -1.49
SUB1-212ENST00000513013 HCN2Q9UL51 889 aa5.77□□□□□ -1.49
SUB1-212ENST00000513013 KCNH4Q9UQ05 1017 aa5.77□□□□□ -1.49
SUB1-212ENST00000513013 M0R082 166 aa5.76□□□□□ -1.49
SUB1-212ENST00000513013 ADH7P40394 386 aa5.76□□□□□ -1.49
SUB1-212ENST00000513013 FAM69CQ0P6D2 419 aa5.76□□□□□ -1.49
SUB1-212ENST00000513013 SFSWAPQ12872 951 aaKnown RBP5.76□□□□□ -1.49
SUB1-212ENST00000513013 DOC2BQ14184 412 aa5.76□□□□□ -1.49
SUB1-212ENST00000513013 ANKMY2Q8IV38 441 aa5.76□□□□□ -1.49
SUB1-212ENST00000513013 ZNF417Q8TAU3 575 aa5.76□□□□□ -1.49
SUB1-212ENST00000513013 ZNF587Q96SQ5 575 aaPredicted RBP5.76□□□□□ -1.49
SUB1-212ENST00000513013 MDFIQ99750 246 aa5.76□□□□□ -1.49
SUB1-212ENST00000513013 BRD7Q9NPI1 651 aa5.76□□□□□ -1.49
SUB1-212ENST00000513013 SFI1A8K8P3 1242 aa5.75□□□□□ -1.49
SUB1-212ENST00000513013 TBCELQ5QJ74 424 aa5.75□□□□□ -1.49
SUB1-212ENST00000513013 STAG2Q8N3U4 1231 aa5.75□□□□□ -1.49
SUB1-212ENST00000513013 OGFOD1Q8N543 542 aa5.75□□□□□ -1.49
SUB1-212ENST00000513013 C7orf43Q8WVR3 580 aa5.75□□□□□ -1.49
SUB1-212ENST00000513013 PHACTR1Q9C0D0 580 aa5.75□□□□□ -1.49
SUB1-212ENST00000513013 SOWAHDA6NJG2 315 aa5.74□□□□□ -1.49
SUB1-212ENST00000513013 ZBTB7BO15156 539 aaPredicted RBP5.74□□□□□ -1.49
SUB1-212ENST00000513013 PPP1R12BO60237 982 aaPredicted RBP5.74□□□□□ -1.49
SUB1-212ENST00000513013 LILRB5O75023 590 aa5.74□□□□□ -1.49
SUB1-212ENST00000513013 ATP2B4P23634 1241 aa5.74□□□□□ -1.49
SUB1-212ENST00000513013 POTEAQ6S8J7 498 aa5.74□□□□□ -1.49
SUB1-212ENST00000513013 SIX5Q8N196 739 aa5.74□□□□□ -1.49
SUB1-212ENST00000513013 MICALL1Q8N3F8 863 aa5.74□□□□□ -1.49
SUB1-212ENST00000513013 SLC30A3Q99726 388 aa5.74□□□□□ -1.49
SUB1-212ENST00000513013 TSPAN10Q9H1Z9 355 aaPredicted RBP5.74□□□□□ -1.49
SUB1-212ENST00000513013 HCN4Q9Y3Q4 1203 aa5.74□□□□□ -1.49
SUB1-212ENST00000513013 C9orf172C9J069 976 aa5.73□□□□□ -1.49
SUB1-212ENST00000513013 RAC1P63000 192 aa5.73□□□□□ -1.49
SUB1-212ENST00000513013 CLDN10P78369 228 aa5.73□□□□□ -1.49
SUB1-212ENST00000513013 PCSK7Q16549 785 aa5.73□□□□□ -1.49
SUB1-212ENST00000513013 ZMYM1Q5SVZ6 1142 aa5.73□□□□□ -1.49
SUB1-212ENST00000513013 TRAPPC3LQ5T215 181 aa5.73□□□□□ -1.49
SUB1-212ENST00000513013 DNAJC14Q6Y2X3 702 aaPredicted RBP5.73□□□□□ -1.49
SUB1-212ENST00000513013 SUSD3Q96L08 255 aa5.73□□□□□ -1.49
SUB1-212ENST00000513013 SLAIN2Q9P270 581 aa5.73□□□□□ -1.49
SUB1-212ENST00000513013 EPB42P16452 691 aa5.72□□□□□ -1.49
SUB1-212ENST00000513013 NRG1Q02297 640 aaPredicted RBP5.72□□□□□ -1.49
SUB1-212ENST00000513013 TYRO3Q06418 890 aa5.72□□□□□ -1.49
SUB1-212ENST00000513013 DPYDQ12882 1025 aa5.72□□□□□ -1.49
SUB1-212ENST00000513013 PNMA5Q96PV4 448 aa5.72□□□□□ -1.49
SUB1-212ENST00000513013 ATAD2Q6PL18 1390 aa5.71□□□□□ -1.5
SUB1-212ENST00000513013 ALBP02768 609 aa5.71□□□□□ -1.5
SUB1-212ENST00000513013 ELNP15502 786 aa5.71□□□□□ -1.5
SUB1-212ENST00000513013 SEC13P55735 322 aa5.71□□□□□ -1.5
SUB1-212ENST00000513013 IER5Q5VY09 327 aa5.71□□□□□ -1.5
SUB1-212ENST00000513013 BTLAQ7Z6A9 289 aa5.71□□□□□ -1.5
SUB1-212ENST00000513013 ALDH16A1Q8IZ83 802 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms