RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 COPS6Q7L5N1 327 aa21.93■■□□□ 1.1
MATR3-220ENST00000512876 PPP1R42Q7Z4L9 355 aa21.93■■□□□ 1.1
MATR3-220ENST00000512876 XAGE3Q8WTP9 111 aa21.93■■□□□ 1.1
MATR3-220ENST00000512876 NECTIN2Q92692 538 aa21.93■■□□□ 1.1
MATR3-220ENST00000512876 CFAP44Q96MT7 982 aa21.93■■□□□ 1.1
MATR3-220ENST00000512876 DDNO94850 711 aaPredicted RBP21.92■■□□□ 1.1
MATR3-220ENST00000512876 C3orf67Q6ZVT6 689 aa21.92■■□□□ 1.1
MATR3-220ENST00000512876 RPGRQ92834 1020 aaKnown RBP21.92■■□□□ 1.1
MATR3-220ENST00000512876 PSMD1Q99460 953 aa21.92■■□□□ 1.1
MATR3-220ENST00000512876 ZNF277Q9NRM2 450 aaPredicted RBP21.92■■□□□ 1.1
MATR3-220ENST00000512876 HSP90AB3PQ58FF7 597 aa21.91■■□□□ 1.1
MATR3-220ENST00000512876 SLC10A5Q5PT55 438 aa21.91■■□□□ 1.1
MATR3-220ENST00000512876 CC2D2BQ6DHV5 1058 aa21.91■■□□□ 1.1
MATR3-220ENST00000512876 L3MBTL3Q96JM7 780 aaPredicted RBP21.91■■□□□ 1.1
MATR3-220ENST00000512876 CRAMP1Q96RY5 1269 aa21.91■■□□□ 1.1
MATR3-220ENST00000512876 LAS1LQ9Y4W2 734 aaKnown RBP21.91■■□□□ 1.1
MATR3-220ENST00000512876 ZNF853P0CG23 659 aa21.9■■□□□ 1.1
MATR3-220ENST00000512876 HDGFL1Q5TGJ6 251 aa21.9■■□□□ 1.1
MATR3-220ENST00000512876 UTP14AQ9BVJ6 771 aaKnown RBP21.9■■□□□ 1.1
MATR3-220ENST00000512876 CHPF2Q9P2E5 772 aa21.9■■□□□ 1.1
MATR3-220ENST00000512876 IARSP41252 1262 aaKnown RBP21.89■■□□□ 1.09
MATR3-220ENST00000512876 HTRA3P83110 453 aa21.89■■□□□ 1.09
MATR3-220ENST00000512876 AIMP1Q12904 312 aaKnown RBP21.89■■□□□ 1.09
MATR3-220ENST00000512876 NLRP10Q86W26 655 aa21.89■■□□□ 1.09
MATR3-220ENST00000512876 MBIPQ9NS73 344 aa21.89■■□□□ 1.09
MATR3-220ENST00000512876 ZNF541Q9H0D2 1346 aa21.88■■□□□ 1.09
MATR3-220ENST00000512876 APAF1O14727 1248 aa21.88■■□□□ 1.09
MATR3-220ENST00000512876 TCIRG1Q13488 830 aa21.88■■□□□ 1.09
MATR3-220ENST00000512876 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
MATR3-220ENST00000512876 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
MATR3-220ENST00000512876 COL4A5P29400 1685 aa21.88■■□□□ 1.09
MATR3-220ENST00000512876 FZD9O00144 591 aa21.87■■□□□ 1.09
MATR3-220ENST00000512876 GRIPAP1Q4V328 841 aa21.87■■□□□ 1.09
MATR3-220ENST00000512876 SLC51AQ86UW1 340 aa21.87■■□□□ 1.09
MATR3-220ENST00000512876 KLRG1Q96E93 195 aa21.87■■□□□ 1.09
MATR3-220ENST00000512876 NLRP3Q96P20 1036 aa21.87■■□□□ 1.09
MATR3-220ENST00000512876 IFT57Q9NWB7 429 aa21.87■■□□□ 1.09
MATR3-220ENST00000512876 DBF4Q9UBU7 674 aaPredicted RBP21.87■■□□□ 1.09
MATR3-220ENST00000512876 SCN4AP35499 1836 aa21.87■■□□□ 1.09
MATR3-220ENST00000512876 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
MATR3-220ENST00000512876 DUSP27Q5VZP5 1158 aa21.86■■□□□ 1.09
MATR3-220ENST00000512876 LAMB2P55268 1798 aa21.85■■□□□ 1.09
MATR3-220ENST00000512876 IQCA1LA6NCM1 817 aa21.85■■□□□ 1.09
MATR3-220ENST00000512876 PLBD2Q8NHP8 589 aa21.85■■□□□ 1.09
MATR3-220ENST00000512876 ABCC4O15439 1325 aa21.84■■□□□ 1.09
MATR3-220ENST00000512876 PCNTO95613 3336 aa21.84■■□□□ 1.09
MATR3-220ENST00000512876 POTEIP0CG38 1075 aa21.84■■□□□ 1.09
MATR3-220ENST00000512876 POTEJP0CG39 1038 aa21.84■■□□□ 1.09
MATR3-220ENST00000512876 GNAI1P63096 354 aa21.83■■□□□ 1.09
MATR3-220ENST00000512876 CALD1Q05682 793 aaKnown RBP21.83■■□□□ 1.09
MATR3-220ENST00000512876 CHADLQ6NUI6 762 aa21.83■■□□□ 1.09
MATR3-220ENST00000512876 JMYQ8N9B5 988 aa21.83■■□□□ 1.09
MATR3-220ENST00000512876 TAF1DQ9H5J8 278 aaPredicted RBP21.83■■□□□ 1.09
MATR3-220ENST00000512876 SH3TC1Q8TE82 1336 aa21.82■■□□□ 1.08
MATR3-220ENST00000512876 ANKRD13DQ6ZTN6 518 aa21.82■■□□□ 1.08
MATR3-220ENST00000512876 ISCA1Q9BUE6 129 aa21.82■■□□□ 1.08
MATR3-220ENST00000512876 HYPKQ9NX55 129 aa21.82■■□□□ 1.08
MATR3-220ENST00000512876 TRMT112Q9UI30 125 aaKnown RBP21.82■■□□□ 1.08
MATR3-220ENST00000512876 ATP6V0A2Q9Y487 856 aa21.82■■□□□ 1.08
MATR3-220ENST00000512876 ADAMTSL1Q8N6G6 1762 aa21.82■■□□□ 1.08
MATR3-220ENST00000512876 HCLS1P14317 486 aaPredicted RBP21.81■■□□□ 1.08
MATR3-220ENST00000512876 CCDC184Q52MB2 194 aa21.81■■□□□ 1.08
MATR3-220ENST00000512876 JDP2Q8WYK2 163 aa21.81■■□□□ 1.08
MATR3-220ENST00000512876 LDHDQ86WU2 507 aa21.8■■□□□ 1.08
MATR3-220ENST00000512876 GPC2Q8N158 579 aa21.8■■□□□ 1.08
MATR3-220ENST00000512876 DDX60Q8IY21 1712 aaKnown RBP21.8■■□□□ 1.08
MATR3-220ENST00000512876 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
MATR3-220ENST00000512876 HACL1Q9UJ83 578 aa21.79■■□□□ 1.08
MATR3-220ENST00000512876 BBOX1O75936 387 aa21.78■■□□□ 1.08
MATR3-220ENST00000512876 TRIM28Q13263 835 aaKnown RBP21.78■■□□□ 1.08
MATR3-220ENST00000512876 RTFDC1Q9BY42 306 aaPredicted RBP21.78■■□□□ 1.08
MATR3-220ENST00000512876 TCERG1O14776 1098 aaKnown RBP21.77■■□□□ 1.08
MATR3-220ENST00000512876 LARGE2Q8N3Y3 721 aa21.77■■□□□ 1.08
MATR3-220ENST00000512876 LRRC37AA6NMS7 1700 aa21.77■■□□□ 1.08
MATR3-220ENST00000512876 PASKQ96RG2 1323 aa21.77■■□□□ 1.07
MATR3-220ENST00000512876 EPHX2P34913 555 aa21.76■■□□□ 1.07
MATR3-220ENST00000512876 GRAPQ13588 217 aa21.76■■□□□ 1.07
MATR3-220ENST00000512876 LTBP1Q14766 1721 aa21.76■■□□□ 1.07
MATR3-220ENST00000512876 SP8Q8IXZ3 490 aa21.76■■□□□ 1.07
MATR3-220ENST00000512876 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
MATR3-220ENST00000512876 GRAPLQ8TC17 118 aaPredicted RBP21.76■■□□□ 1.07
MATR3-220ENST00000512876 VPS33BQ9H267 617 aa21.76■■□□□ 1.07
MATR3-220ENST00000512876 DUOX1Q9NRD9 1551 aa21.75■■□□□ 1.07
MATR3-220ENST00000512876 ATP5J2-PTCD1G3V325 749 aa21.75■■□□□ 1.07
MATR3-220ENST00000512876 EIF6P56537 245 aaKnown RBP21.75■■□□□ 1.07
MATR3-220ENST00000512876 CCDC27Q2M243 656 aa21.75■■□□□ 1.07
MATR3-220ENST00000512876 DDX46Q7L014 1031 aaKnown RBP21.75■■□□□ 1.07
MATR3-220ENST00000512876 ELL2O00472 640 aaPredicted RBP21.74■■□□□ 1.07
MATR3-220ENST00000512876 PPIP5K2O43314 1243 aa21.74■■□□□ 1.07
MATR3-220ENST00000512876 SF3B3Q15393 1217 aaKnown RBP21.74■■□□□ 1.07
MATR3-220ENST00000512876 ZNF428Q96B54 188 aa21.74■■□□□ 1.07
MATR3-220ENST00000512876 FAM89AQ96GI7 184 aa21.74■■□□□ 1.07
MATR3-220ENST00000512876 TMX4Q9H1E5 349 aaPredicted RBP21.74■■□□□ 1.07
MATR3-220ENST00000512876 PHAXQ9H814 394 aaKnown RBP21.74■■□□□ 1.07
MATR3-220ENST00000512876 SCNN1DP51172 638 aa21.73■■□□□ 1.07
MATR3-220ENST00000512876 GOLGA2Q08379 1002 aa21.73■■□□□ 1.07
MATR3-220ENST00000512876 AOC3Q16853 763 aa21.73■■□□□ 1.07
MATR3-220ENST00000512876 TMC4Q7Z404 712 aa21.73■■□□□ 1.07
MATR3-220ENST00000512876 PNMA8AQ86V59 439 aaPredicted RBP21.73■■□□□ 1.07
MATR3-220ENST00000512876 NIM1KQ8IY84 436 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms