RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
SNX25-205ENST00000512853 FAM200AQ8TCP9 573 aa13.78□□□□□ -0.2
SNX25-205ENST00000512853 DBF4Q9UBU7 674 aaPredicted RBP13.78□□□□□ -0.2
SNX25-205ENST00000512853 PDCP20941 246 aa13.78□□□□□ -0.2
SNX25-205ENST00000512853 PSMA5P28066 241 aa13.78□□□□□ -0.2
SNX25-205ENST00000512853 AKAP4Q5JQC9 854 aa13.78□□□□□ -0.2
SNX25-205ENST00000512853 TPCN1Q9ULQ1 816 aa13.78□□□□□ -0.2
SNX25-205ENST00000512853 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
SNX25-205ENST00000512853 SLC27A2O14975 620 aa13.77□□□□□ -0.21
SNX25-205ENST00000512853 NMIQ13287 307 aaPredicted RBP13.77□□□□□ -0.21
SNX25-205ENST00000512853 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
SNX25-205ENST00000512853 NUP62CLQ9H1M0 184 aa13.77□□□□□ -0.21
SNX25-205ENST00000512853 PYCARDQ9ULZ3 195 aa13.77□□□□□ -0.21
SNX25-205ENST00000512853 PXDNQ92626 1479 aa13.77□□□□□ -0.21
SNX25-205ENST00000512853 ANXA1P04083 346 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 MAP3K11Q16584 847 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 NBPF6Q5VWK0 638 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 RBM43Q6ZSC3 357 aaKnown RBP13.76□□□□□ -0.21
SNX25-205ENST00000512853 AACSQ86V21 672 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 NECAB1Q8N987 351 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 NBPF4Q96M43 638 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 PA2G4Q9UQ80 394 aaKnown RBP13.76□□□□□ -0.21
SNX25-205ENST00000512853 MAP3K2Q9Y2U5 619 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 TYRO3Q06418 890 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 TEFQ10587 303 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 LARP1BQ659C4 914 aaKnown RBP13.76□□□□□ -0.21
SNX25-205ENST00000512853 CDC37L1Q7L3B6 337 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 C9orf78Q9NZ63 289 aaPredicted RBP13.76□□□□□ -0.21
SNX25-205ENST00000512853 KIF3AQ9Y496 699 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 MRVI1Q9Y6F6 885 aa13.76□□□□□ -0.21
SNX25-205ENST00000512853 FER1L4A9Z1Z3 1794 aa13.75□□□□□ -0.21
SNX25-205ENST00000512853 LIG1P18858 919 aa13.75□□□□□ -0.21
SNX25-205ENST00000512853 RPS6KB1P23443 525 aa13.75□□□□□ -0.21
SNX25-205ENST00000512853 ZNF530Q6P9A1 599 aaPredicted RBP13.75□□□□□ -0.21
SNX25-205ENST00000512853 FAM227BQ96M60 508 aa13.75□□□□□ -0.21
SNX25-205ENST00000512853 DDX19AQ9NUU7 478 aaKnown RBP13.75□□□□□ -0.21
SNX25-205ENST00000512853 PRDM4Q9UKN5 801 aa13.75□□□□□ -0.21
SNX25-205ENST00000512853 MYH15Q9Y2K3 1946 aa13.75□□□□□ -0.21
SNX25-205ENST00000512853 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
SNX25-205ENST00000512853 SASH1O94885 1247 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 TSGA10IPQ3SY00 556 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 PLEKHO1Q53GL0 409 aaPredicted RBP13.74□□□□□ -0.21
SNX25-205ENST00000512853 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 SUCLG2Q96I99 432 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 SCAND2PQ9GZW5 306 aaPredicted RBP13.74□□□□□ -0.21
SNX25-205ENST00000512853 HMG20BQ9P0W2 317 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 SLIT3O75094 1523 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 GRM8O00222 908 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 KCNJ4P48050 445 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 BLOC1S2Q6QNY1 142 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 EAF2Q96CJ1 260 aaPredicted RBP13.74□□□□□ -0.21
SNX25-205ENST00000512853 KAZALD1Q96I82 304 aa13.74□□□□□ -0.21
SNX25-205ENST00000512853 NPHP3Q7Z494 1330 aa13.73□□□□□ -0.21
SNX25-205ENST00000512853 RFX7Q2KHR2 1363 aa13.73□□□□□ -0.21
SNX25-205ENST00000512853 A0A0D9SFI3 127 aa13.73□□□□□ -0.21
SNX25-205ENST00000512853 GIGYF1O75420 1035 aaPredicted RBP13.73□□□□□ -0.21
SNX25-205ENST00000512853 KCNA6P17658 529 aa13.73□□□□□ -0.21
SNX25-205ENST00000512853 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
SNX25-205ENST00000512853 PROSER3Q2NL68 480 aa13.73□□□□□ -0.21
SNX25-205ENST00000512853 AMOTQ4VCS5 1084 aa13.73□□□□□ -0.21
SNX25-205ENST00000512853 JARID2Q92833 1246 aaPredicted RBP13.73□□□□□ -0.21
SNX25-205ENST00000512853 CLSTN2Q9H4D0 955 aa13.73□□□□□ -0.21
SNX25-205ENST00000512853 CEBPAP49715 358 aaPredicted RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
SNX25-205ENST00000512853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 TDRD7Q8NHU6 1098 aaKnown RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 DDX54Q8TDD1 881 aaKnown RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 TSC1Q92574 1164 aa13.72□□□□□ -0.21
SNX25-205ENST00000512853 BCL2L12Q9HB09 334 aa13.72□□□□□ -0.21
SNX25-205ENST00000512853 PHF8Q9UPP1 1060 aa13.72□□□□□ -0.21
SNX25-205ENST00000512853 C5P01031 1676 aa13.72□□□□□ -0.21
SNX25-205ENST00000512853 DTNBO60941 627 aa13.72□□□□□ -0.21
SNX25-205ENST00000512853 CHAF1AQ13111 956 aaPredicted RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNX25-205ENST00000512853 COL9A3Q14050 684 aaPredicted RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 CWF19L2Q2TBE0 894 aaKnown RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 THEMISQ8N1K5 641 aaPredicted RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 LEO1Q8WVC0 666 aaPredicted RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 CBX8Q9HC52 389 aa13.72□□□□□ -0.21
SNX25-205ENST00000512853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.72□□□□□ -0.21
SNX25-205ENST00000512853 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.21
SNX25-205ENST00000512853 CTIFO43310 598 aaKnown RBP13.71□□□□□ -0.21
SNX25-205ENST00000512853 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.21
SNX25-205ENST00000512853 FERMT3Q86UX7 667 aa13.71□□□□□ -0.21
SNX25-205ENST00000512853 PLA2G4DQ86XP0 818 aa13.71□□□□□ -0.21
SNX25-205ENST00000512853 SPC24Q8NBT2 197 aa13.71□□□□□ -0.21
SNX25-205ENST00000512853 KCNH5Q8NCM2 988 aa13.71□□□□□ -0.21
SNX25-205ENST00000512853 FSD1Q9BTV5 496 aa13.71□□□□□ -0.21
SNX25-205ENST00000512853 TNMDQ9H2S6 317 aa13.71□□□□□ -0.21
SNX25-205ENST00000512853 BICC1Q9H694 974 aaKnown RBP13.71□□□□□ -0.21
SNX25-205ENST00000512853 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
SNX25-205ENST00000512853 SETD1BQ9UPS6 1966 aaKnown RBP13.71□□□□□ -0.21
SNX25-205ENST00000512853 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
SNX25-205ENST00000512853 PTGS1P23219 599 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 RESTQ13127 1097 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 LARP1Q6PKG0 1096 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms