RNA–Protein interactions for RNA: ENST00000512845.5

PRDM5-210, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 1,249 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-210ENST00000512845 NFKBIEO00221 500 aa24.8■■□□□ 1.56
PRDM5-210ENST00000512845 C21orf2O43822 256 aa24.8■■□□□ 1.56
PRDM5-210ENST00000512845 GOLGA2Q08379 1002 aa24.8■■□□□ 1.56
PRDM5-210ENST00000512845 STK31Q9BXU1 1019 aa24.8■■□□□ 1.56
PRDM5-210ENST00000512845 SALL2Q9Y467 1007 aaPredicted RBP24.8■■□□□ 1.56
PRDM5-210ENST00000512845 SBF1O95248 1867 aa24.8■■□□□ 1.56
PRDM5-210ENST00000512845 DDX58O95786 925 aaKnown RBP24.79■■□□□ 1.56
PRDM5-210ENST00000512845 TWISTNBQ3B726 338 aaPredicted RBP24.79■■□□□ 1.56
PRDM5-210ENST00000512845 SLC10A5Q5PT55 438 aa24.79■■□□□ 1.56
PRDM5-210ENST00000512845 NLRP10Q86W26 655 aa24.79■■□□□ 1.56
PRDM5-210ENST00000512845 MYH16Q9H6N6 1097 aa24.79■■□□□ 1.56
PRDM5-210ENST00000512845 ZNF219Q9P2Y4 722 aaPredicted RBP24.79■■□□□ 1.56
PRDM5-210ENST00000512845 CACNA1SQ13698 1873 aa24.79■■□□□ 1.56
PRDM5-210ENST00000512845 NLRP3Q96P20 1036 aa24.78■■□□□ 1.56
PRDM5-210ENST00000512845 ZC3H4Q9UPT8 1303 aaKnown RBP24.78■■□□□ 1.56
PRDM5-210ENST00000512845 LMNB1P20700 586 aa24.77■■□□□ 1.56
PRDM5-210ENST00000512845 PRELPP51888 382 aa24.77■■□□□ 1.56
PRDM5-210ENST00000512845 TRIM28Q13263 835 aaKnown RBP24.77■■□□□ 1.56
PRDM5-210ENST00000512845 RIC3Q7Z5B4 369 aa24.77■■□□□ 1.56
PRDM5-210ENST00000512845 TSPYL6Q8N831 410 aa24.77■■□□□ 1.56
PRDM5-210ENST00000512845 RPGRQ92834 1020 aaKnown RBP24.77■■□□□ 1.56
PRDM5-210ENST00000512845 FANCIQ9NVI1 1328 aa24.77■■□□□ 1.56
PRDM5-210ENST00000512845 FER1L6Q2WGJ9 1857 aa24.77■■□□□ 1.56
PRDM5-210ENST00000512845 HOXA10P31260 410 aaPredicted RBP24.76■■□□□ 1.55
PRDM5-210ENST00000512845 TRMT112Q9UI30 125 aaKnown RBP24.76■■□□□ 1.55
PRDM5-210ENST00000512845 LTBP3Q9NS15 1303 aa24.76■■□□□ 1.55
PRDM5-210ENST00000512845 C7orf43Q8WVR3 580 aa24.75■■□□□ 1.55
PRDM5-210ENST00000512845 ISCA1Q9BUE6 129 aa24.75■■□□□ 1.55
PRDM5-210ENST00000512845 SH3TC1Q8TE82 1336 aa24.75■■□□□ 1.55
PRDM5-210ENST00000512845 CC2D2BQ6DHV5 1058 aa24.74■■□□□ 1.55
PRDM5-210ENST00000512845 PHAXQ9H814 394 aaKnown RBP24.74■■□□□ 1.55
PRDM5-210ENST00000512845 C1QTNF8P60827 252 aa24.73■■□□□ 1.55
PRDM5-210ENST00000512845 GRIPAP1Q4V328 841 aa24.73■■□□□ 1.55
PRDM5-210ENST00000512845 CCDC93Q567U6 631 aa24.73■■□□□ 1.55
PRDM5-210ENST00000512845 RBM17Q96I25 401 aaKnown RBP24.73■■□□□ 1.55
PRDM5-210ENST00000512845 CRAMP1Q96RY5 1269 aa24.73■■□□□ 1.55
PRDM5-210ENST00000512845 TAOK3Q9H2K8 898 aa24.73■■□□□ 1.55
PRDM5-210ENST00000512845 HSP90B1P14625 803 aaKnown RBP24.72■■□□□ 1.55
PRDM5-210ENST00000512845 C3orf67Q6ZVT6 689 aa24.72■■□□□ 1.55
PRDM5-210ENST00000512845 RTKN2Q8IZC4 609 aa24.72■■□□□ 1.55
PRDM5-210ENST00000512845 TIAM2Q8IVF5 1701 aa24.71■■□□□ 1.55
PRDM5-210ENST00000512845 ZNF521Q96K83 1311 aa24.7■■□□□ 1.54
PRDM5-210ENST00000512845 KDM2BQ8NHM5 1336 aa24.69■■□□□ 1.54
PRDM5-210ENST00000512845 KIF3CO14782 793 aa24.69■■□□□ 1.54
PRDM5-210ENST00000512845 VAMP4O75379 141 aa24.69■■□□□ 1.54
PRDM5-210ENST00000512845 SLC4A2P04920 1241 aa24.69■■□□□ 1.54
PRDM5-210ENST00000512845 EXOSC9Q06265 439 aaKnown RBP24.69■■□□□ 1.54
PRDM5-210ENST00000512845 KSR2Q6VAB6 950 aa24.69■■□□□ 1.54
PRDM5-210ENST00000512845 CCDC191Q8NCU4 936 aa24.69■■□□□ 1.54
PRDM5-210ENST00000512845 CACNA1FO60840 1977 aa24.68■■□□□ 1.54
PRDM5-210ENST00000512845 ATP5J2-PTCD1G3V325 749 aa24.68■■□□□ 1.54
PRDM5-210ENST00000512845 OLFM4Q6UX06 510 aa24.68■■□□□ 1.54
PRDM5-210ENST00000512845 METTL22Q9BUU2 404 aaPredicted RBP24.68■■□□□ 1.54
PRDM5-210ENST00000512845 TMX4Q9H1E5 349 aaPredicted RBP24.68■■□□□ 1.54
PRDM5-210ENST00000512845 SNED1Q8TER0 1413 aa24.68■■□□□ 1.54
PRDM5-210ENST00000512845 CCDC88AQ3V6T2 1871 aa24.67■■□□□ 1.54
PRDM5-210ENST00000512845 SYNE4Q8N205 404 aa24.67■■□□□ 1.54
PRDM5-210ENST00000512845 NMRK2Q9NPI5 230 aa24.67■■□□□ 1.54
PRDM5-210ENST00000512845 HCLS1P14317 486 aaPredicted RBP24.66■■□□□ 1.54
PRDM5-210ENST00000512845 NEXNQ0ZGT2 675 aa24.66■■□□□ 1.54
PRDM5-210ENST00000512845 ZNF428Q96B54 188 aa24.66■■□□□ 1.54
PRDM5-210ENST00000512845 SPINK5Q9NQ38 1064 aaPredicted RBP24.66■■□□□ 1.54
PRDM5-210ENST00000512845 LAMB2P55268 1798 aa24.65■■□□□ 1.54
PRDM5-210ENST00000512845 BBOX1O75936 387 aa24.65■■□□□ 1.54
PRDM5-210ENST00000512845 FKBP4Q02790 459 aaKnown RBP eCLIP24.65■■□□□ 1.54
PRDM5-210ENST00000512845 DIEXFQ68CQ4 756 aaKnown RBP24.65■■□□□ 1.54
PRDM5-210ENST00000512845 ZBTB38Q8NAP3 1195 aaPredicted RBP24.65■■□□□ 1.54
PRDM5-210ENST00000512845 MYD88Q99836 296 aa24.65■■□□□ 1.54
PRDM5-210ENST00000512845 MAP3K2Q9Y2U5 619 aa24.65■■□□□ 1.54
PRDM5-210ENST00000512845 DICER1Q9UPY3 1922 aaKnown RBP24.65■■□□□ 1.54
PRDM5-210ENST00000512845 PI4KAP2A4QPH2 592 aa24.64■■□□□ 1.54
PRDM5-210ENST00000512845 E9PSI1 815 aa24.64■■□□□ 1.54
PRDM5-210ENST00000512845 DDX46Q7L014 1031 aaKnown RBP24.64■■□□□ 1.54
PRDM5-210ENST00000512845 PI4KAP1Q8N8J0 262 aa24.64■■□□□ 1.54
PRDM5-210ENST00000512845 FAM89AQ96GI7 184 aa24.64■■□□□ 1.54
PRDM5-210ENST00000512845 CWC25Q9NXE8 425 aaPredicted RBP24.64■■□□□ 1.54
PRDM5-210ENST00000512845 TCERG1O14776 1098 aaKnown RBP24.63■■□□□ 1.53
PRDM5-210ENST00000512845 DPY19L2Q6NUT2 758 aa24.63■■□□□ 1.53
PRDM5-210ENST00000512845 TMC4Q7Z404 712 aa24.63■■□□□ 1.53
PRDM5-210ENST00000512845 PSMD1Q99460 953 aa24.63■■□□□ 1.53
PRDM5-210ENST00000512845 DDX60Q8IY21 1712 aaKnown RBP24.63■■□□□ 1.53
PRDM5-210ENST00000512845 ABCC4O15439 1325 aa24.62■■□□□ 1.53
PRDM5-210ENST00000512845 PPEF1O14829 653 aaPredicted RBP24.62■■□□□ 1.53
PRDM5-210ENST00000512845 FLIIQ13045 1269 aa24.62■■□□□ 1.53
PRDM5-210ENST00000512845 SF3B3Q15393 1217 aaKnown RBP24.62■■□□□ 1.53
PRDM5-210ENST00000512845 GLTPD2A6NH11 291 aa24.61■■□□□ 1.53
PRDM5-210ENST00000512845 IRS4O14654 1257 aaPredicted RBP24.61■■□□□ 1.53
PRDM5-210ENST00000512845 PCCAP05165 728 aaPredicted RBP24.61■■□□□ 1.53
PRDM5-210ENST00000512845 FKBP5Q13451 457 aaPredicted RBP24.6■■□□□ 1.53
PRDM5-210ENST00000512845 SLC51AQ86UW1 340 aa24.6■■□□□ 1.53
PRDM5-210ENST00000512845 ZNF277Q9NRM2 450 aaPredicted RBP24.6■■□□□ 1.53
PRDM5-210ENST00000512845 ATP6V0A2Q9Y487 856 aa24.6■■□□□ 1.53
PRDM5-210ENST00000512845 G2E3Q7L622 706 aa24.59■■□□□ 1.53
PRDM5-210ENST00000512845 GRAPQ13588 217 aa24.58■■□□□ 1.53
PRDM5-210ENST00000512845 RTL5Q5HYW3 569 aaPredicted RBP24.58■■□□□ 1.53
PRDM5-210ENST00000512845 GRAPLQ8TC17 118 aaPredicted RBP24.58■■□□□ 1.53
PRDM5-210ENST00000512845 TOMM70O94826 608 aa24.57■■□□□ 1.52
PRDM5-210ENST00000512845 SP8Q8IXZ3 490 aa24.57■■□□□ 1.52
PRDM5-210ENST00000512845 VPS33BQ9H267 617 aa24.57■■□□□ 1.52
PRDM5-210ENST00000512845 RRAGCQ9HB90 399 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms