RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 RPGRQ92834 1020 aaKnown RBP9.49□□□□□ -0.89
NR1I3-231ENST00000512340 MASTLQ96GX5 879 aa9.49□□□□□ -0.89
NR1I3-231ENST00000512340 METTL22Q9BUU2 404 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-231ENST00000512340 CWC25Q9NXE8 425 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-231ENST00000512340 HDAC5Q9UQL6 1122 aa9.49□□□□□ -0.89
NR1I3-231ENST00000512340 BCS1LQ9Y276 419 aa9.49□□□□□ -0.89
NR1I3-231ENST00000512340 ADCY9O60503 1353 aa9.49□□□□□ -0.89
NR1I3-231ENST00000512340 BCORQ6W2J9 1755 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 PI4KAP2A4QPH2 592 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 TCERG1O14776 1098 aaKnown RBP9.48□□□□□ -0.89
NR1I3-231ENST00000512340 NPR1P16066 1061 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 DPEP1P16444 411 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 GRIPAP1Q4V328 841 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 STYK1Q6J9G0 422 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 NLRP10Q86W26 655 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 PI4KAP1Q8N8J0 262 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 RBM17Q96I25 401 aaKnown RBP9.48□□□□□ -0.89
NR1I3-231ENST00000512340 MYD88Q99836 296 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 PHAXQ9H814 394 aaKnown RBP9.48□□□□□ -0.89
NR1I3-231ENST00000512340 SPINK5Q9NQ38 1064 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-231ENST00000512340 SMC4Q9NTJ3 1288 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 MAP3K2Q9Y2U5 619 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 PTPRCP08575 1304 aa9.48□□□□□ -0.89
NR1I3-231ENST00000512340 NUP98P52948 1817 aa9.47□□□□□ -0.89
NR1I3-231ENST00000512340 YBX3P16989 372 aaKnown RBP eCLIP9.47□□□□□ -0.89
NR1I3-231ENST00000512340 SUSD4Q5VX71 490 aa9.47□□□□□ -0.89
NR1I3-231ENST00000512340 TRMT2AQ8IZ69 625 aaKnown RBP9.47□□□□□ -0.89
NR1I3-231ENST00000512340 DNAAF4Q8WXU2 420 aa9.47□□□□□ -0.89
NR1I3-231ENST00000512340 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
NR1I3-231ENST00000512340 ATP5J2-PTCD1G3V325 749 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 APLP1P51693 650 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 SLC10A5Q5PT55 438 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 CC2D2BQ6DHV5 1058 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 DDX46Q7L014 1031 aaKnown RBP9.46□□□□□ -0.9
NR1I3-231ENST00000512340 ZBTB38Q8NAP3 1195 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-231ENST00000512340 LINS1Q8NG48 757 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 ISCA1Q9BUE6 129 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 API5Q9BZZ5 524 aaKnown RBP9.46□□□□□ -0.9
NR1I3-231ENST00000512340 KIF16BQ96L93 1317 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
NR1I3-231ENST00000512340 KIF13BQ9NQT8 1826 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 NTSR2O95665 410 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 PCCAP05165 728 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-231ENST00000512340 CENPBP07199 599 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-231ENST00000512340 SRGNP10124 158 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 CHRNA5P30532 468 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 ARHGAP27Q6ZUM4 889 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 TMC4Q7Z404 712 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 NUTM1Q86Y26 1132 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 SRCIN1Q9C0H9 1055 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 RIC1Q4ADV7 1423 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 NRXN2Q9P2S2 1712 aa9.45□□□□□ -0.9
NR1I3-231ENST00000512340 AFDNP55196 1824 aaKnown RBP9.45□□□□□ -0.9
NR1I3-231ENST00000512340 KLRG2A4D1S0 409 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-231ENST00000512340 IRS4O14654 1257 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-231ENST00000512340 ALDH1L1O75891 902 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 BBOX1O75936 387 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 MS4A1P11836 297 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 CCDC152Q4G0S7 254 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 SLC4A10Q6U841 1118 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 RTKN2Q8IZC4 609 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 SSH1Q8WYL5 1049 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 CRAMP1Q96RY5 1269 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 C9orf78Q9NZ63 289 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-231ENST00000512340 UBN2Q6ZU65 1347 aa9.44□□□□□ -0.9
NR1I3-231ENST00000512340 PDE8AO60658 829 aa9.43□□□□□ -0.9
NR1I3-231ENST00000512340 HOXA10P31260 410 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-231ENST00000512340 CCT4P50991 539 aaKnown RBP9.43□□□□□ -0.9
NR1I3-231ENST00000512340 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-231ENST00000512340 CRY2Q49AN0 593 aa9.43□□□□□ -0.9
NR1I3-231ENST00000512340 G2E3Q7L622 706 aa9.43□□□□□ -0.9
NR1I3-231ENST00000512340 CCDC24Q8N4L8 307 aa9.43□□□□□ -0.9
NR1I3-231ENST00000512340 MRPL50Q8N5N7 158 aaKnown RBP9.43□□□□□ -0.9
NR1I3-231ENST00000512340 ARHGAP45Q92619 1136 aa9.43□□□□□ -0.9
NR1I3-231ENST00000512340 FAM89AQ96GI7 184 aa9.43□□□□□ -0.9
NR1I3-231ENST00000512340 ANKRD36CQ5JPF3 1778 aa9.42□□□□□ -0.9
NR1I3-231ENST00000512340 CDHR2Q9BYE9 1310 aa9.42□□□□□ -0.9
NR1I3-231ENST00000512340 NEURL1BA8MQ27 555 aa9.42□□□□□ -0.9
NR1I3-231ENST00000512340 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-231ENST00000512340 RARSP54136 660 aaKnown RBP9.42□□□□□ -0.9
NR1I3-231ENST00000512340 GCKRQ14397 625 aa9.42□□□□□ -0.9
NR1I3-231ENST00000512340 CCDC93Q567U6 631 aa9.42□□□□□ -0.9
NR1I3-231ENST00000512340 PRPF40BQ6NWY9 871 aaKnown RBP9.42□□□□□ -0.9
NR1I3-231ENST00000512340 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-231ENST00000512340 WWC3Q9ULE0 1092 aa9.42□□□□□ -0.9
NR1I3-231ENST00000512340 TOMM70O94826 608 aa9.41□□□□□ -0.9
NR1I3-231ENST00000512340 KCNA3P22001 575 aa9.41□□□□□ -0.9
NR1I3-231ENST00000512340 SF3B3Q15393 1217 aaKnown RBP9.41□□□□□ -0.9
NR1I3-231ENST00000512340 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-231ENST00000512340 UBE3BQ7Z3V4 1068 aa9.41□□□□□ -0.9
NR1I3-231ENST00000512340 FTSJ3Q8IY81 847 aaKnown RBP9.41□□□□□ -0.9
NR1I3-231ENST00000512340 SUPT20HQ8NEM7 779 aa9.41□□□□□ -0.9
NR1I3-231ENST00000512340 CDC5LQ99459 802 aaKnown RBP9.41□□□□□ -0.9
NR1I3-231ENST00000512340 BCL2L13Q9BXK5 485 aa9.41□□□□□ -0.9
NR1I3-231ENST00000512340 ARFGEF2Q9Y6D5 1785 aa9.41□□□□□ -0.9
NR1I3-231ENST00000512340 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-231ENST00000512340 ABCC12Q96J65 1359 aa9.4□□□□□ -0.9
NR1I3-231ENST00000512340 F6X3S4 739 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms