RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 TMX3Q96JJ7 454 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 GRPEL1Q9HAV7 217 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 ZFYP08048 801 aaPredicted RBP15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 ATP2B2Q01814 1243 aa15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 NBPF5PQ86XG9 351 aaPredicted RBP15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 CDCA7Q9BWT1 371 aaPredicted RBP15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 TRIM5Q9C035 493 aa15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 ADGRB3O60242 1522 aa15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 CHMLP26374 656 aa15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 HMGN5P82970 282 aaKnown RBP15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 RBM8AQ9Y5S9 174 aaKnown RBP15.42■□□□□ 0.06
PCDHA4-202ENST00000512229 DZIP1Q86YF9 867 aaKnown RBP15.41■□□□□ 0.06
PCDHA4-202ENST00000512229 RPGRQ92834 1020 aaKnown RBP15.41■□□□□ 0.06
PCDHA4-202ENST00000512229 MADDQ8WXG6 1647 aa15.41■□□□□ 0.06
PCDHA4-202ENST00000512229 PHKG2P15735 406 aa15.41■□□□□ 0.06
PCDHA4-202ENST00000512229 USP44Q9H0E7 712 aa15.41■□□□□ 0.06
PCDHA4-202ENST00000512229 SCAND2PQ9GZW5 306 aaPredicted RBP15.41■□□□□ 0.06
PCDHA4-202ENST00000512229 BRPF3Q9ULD4 1205 aa15.41■□□□□ 0.06
PCDHA4-202ENST00000512229 IRS4O14654 1257 aaPredicted RBP15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 ZNF853P0CG23 659 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 HAND2P61296 217 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 WASF1Q92558 559 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 KIF24Q5T7B8 1368 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 MCMDC2Q4G0Z9 681 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 NLRP3Q96P20 1036 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 SETDB2Q96T68 719 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 PPP1R1BQ9UD71 204 aaPredicted RBP15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 RBM5P52756 815 aaKnown RBP eCLIP15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 TFCP2Q12800 502 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 FAM43AQ8N2R8 423 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 RNF41Q9H4P4 317 aaPredicted RBP15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 ALKQ9UM73 1620 aa15.4■□□□□ 0.06
PCDHA4-202ENST00000512229 CCDC196A0A1B0GTZ2 297 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 USP5P45974 858 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 CCDC191Q8NCU4 936 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 FAM89AQ96GI7 184 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 UTP14AQ9BVJ6 771 aaKnown RBP15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 TCEAL9Q9UHQ7 104 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 BRPF1P55201 1214 aaPredicted RBP15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 GCKRQ14397 625 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 USP26Q9BXU7 913 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 GLI2P10070 1586 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 STX6O43752 255 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 BAG4O95429 457 aaKnown RBP15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 TXLNAP40222 546 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 IQCA1Q86XH1 822 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 NUP62CLQ9H1M0 184 aa15.39■□□□□ 0.05
PCDHA4-202ENST00000512229 ERVV-2B6SEH9 535 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 IFIT3O14879 490 aaKnown RBP15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 C8orf76Q96K31 380 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 CCDC39Q9UFE4 941 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 INO80Q9ULG1 1556 aaPredicted RBP15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 CDK12Q9NYV4 1490 aaPredicted RBP15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 CCDC173Q0VFZ6 552 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 DNAJC10Q8IXB1 793 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 ZNF287Q9HBT7 754 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 PAG1Q9NWQ8 432 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 RANBP6O60518 1105 aaKnown RBP15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 NMIQ13287 307 aaPredicted RBP15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 ZSCAN29Q8IWY8 852 aaPredicted RBP15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 KLHDC4Q8TBB5 520 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 MKNK2Q9HBH9 465 aa15.38■□□□□ 0.05
PCDHA4-202ENST00000512229 GJB2P29033 226 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 PRIM1P49642 420 aaKnown RBP15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 C6orf229H3BNL8 230 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 BRF1Q92994 677 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 SUCLG2Q96I99 432 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 PCMTD1Q96MG8 357 aaPredicted RBP15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 RTL1A6NKG5 1358 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 SYCE3A1L190 88 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 GOLGA8BA8MQT2 603 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 CEP152O94986 1710 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 TIMM10P62072 90 aa15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 NOL7Q9UMY1 257 aaKnown RBP15.37■□□□□ 0.05
PCDHA4-202ENST00000512229 IPO7O95373 1038 aaKnown RBP15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 CCDC82Q8N4S0 544 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 SLC12A7Q9Y666 1083 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 EYA2O00167 538 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 SLC9C2Q5TAH2 1124 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 NCOA7Q8NI08 942 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 DIP2CQ9Y2E4 1556 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 RBM25P49756 843 aaKnown RBP15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 SOGA3Q5TF21 947 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 ZNF592Q92610 1267 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 HELBQ8NG08 1087 aaPredicted RBP15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 GDPD2Q9HCC8 539 aa15.36■□□□□ 0.05
PCDHA4-202ENST00000512229 ABCA6Q8N139 1617 aa15.35■□□□□ 0.05
PCDHA4-202ENST00000512229 FAM13BQ9NYF5 915 aa15.35■□□□□ 0.05
PCDHA4-202ENST00000512229 IQSEC3Q9UPP2 1182 aaPredicted RBP15.35■□□□□ 0.05
PCDHA4-202ENST00000512229 TPTE2Q6XPS3 522 aa15.35■□□□□ 0.05
PCDHA4-202ENST00000512229 NECAB1Q8N987 351 aa15.35■□□□□ 0.05
PCDHA4-202ENST00000512229 SSH3Q8TE77 659 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms