RNA–Protein interactions for RNA: ENST00000511926.5

NFKB1-210, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-210ENST00000511926 IBTKQ9P2D0 1353 aaPredicted RBP21.07■□□□□ 0.96
NFKB1-210ENST00000511926 FKBP4Q02790 459 aaKnown RBP eCLIP21.06■□□□□ 0.96
NFKB1-210ENST00000511926 PPP1R42Q7Z4L9 355 aa21.06■□□□□ 0.96
NFKB1-210ENST00000511926 UBN2Q6ZU65 1347 aa21.05■□□□□ 0.96
NFKB1-210ENST00000511926 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
NFKB1-210ENST00000511926 RTKN2Q8IZC4 609 aa21.05■□□□□ 0.96
NFKB1-210ENST00000511926 HTRA3P83110 453 aa21.04■□□□□ 0.96
NFKB1-210ENST00000511926 SUSD4Q5VX71 490 aa21.04■□□□□ 0.96
NFKB1-210ENST00000511926 COPS6Q7L5N1 327 aa21.04■□□□□ 0.96
NFKB1-210ENST00000511926 ZNF34Q8IZ26 560 aa21.04■□□□□ 0.96
NFKB1-210ENST00000511926 DNAJC5GQ8N7S2 189 aa21.04■□□□□ 0.96
NFKB1-210ENST00000511926 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
NFKB1-210ENST00000511926 HYPKQ9NX55 129 aa21.04■□□□□ 0.96
NFKB1-210ENST00000511926 POTECB2RU33 542 aa21.03■□□□□ 0.96
NFKB1-210ENST00000511926 DDNO94850 711 aaPredicted RBP21.03■□□□□ 0.96
NFKB1-210ENST00000511926 KRT24Q2M2I5 525 aa21.03■□□□□ 0.96
NFKB1-210ENST00000511926 CRY2Q49AN0 593 aa21.03■□□□□ 0.96
NFKB1-210ENST00000511926 OLFM4Q6UX06 510 aa21.03■□□□□ 0.96
NFKB1-210ENST00000511926 NECTIN2Q92692 538 aa21.03■□□□□ 0.96
NFKB1-210ENST00000511926 ZNF277Q9NRM2 450 aaPredicted RBP21.03■□□□□ 0.96
NFKB1-210ENST00000511926 RIC1Q4ADV7 1423 aa21.03■□□□□ 0.96
NFKB1-210ENST00000511926 RNF123Q5XPI4 1314 aa21.03■□□□□ 0.96
NFKB1-210ENST00000511926 ANXA1P04083 346 aa21.02■□□□□ 0.96
NFKB1-210ENST00000511926 PROSER3Q2NL68 480 aa21.02■□□□□ 0.96
NFKB1-210ENST00000511926 XAGE3Q8WTP9 111 aa21.02■□□□□ 0.96
NFKB1-210ENST00000511926 CHPF2Q9P2E5 772 aa21.02■□□□□ 0.96
NFKB1-210ENST00000511926 IL16Q14005 1332 aa21.02■□□□□ 0.95
NFKB1-210ENST00000511926 NTSR2O95665 410 aa21.01■□□□□ 0.95
NFKB1-210ENST00000511926 AIMP1Q12904 312 aaKnown RBP21.01■□□□□ 0.95
NFKB1-210ENST00000511926 WWC1Q8IX03 1113 aa21.01■□□□□ 0.95
NFKB1-210ENST00000511926 SYNE4Q8N205 404 aa21■□□□□ 0.95
NFKB1-210ENST00000511926 RBM17Q96I25 401 aaKnown RBP21■□□□□ 0.95
NFKB1-210ENST00000511926 IARSP41252 1262 aaKnown RBP20.99■□□□□ 0.95
NFKB1-210ENST00000511926 TCIRG1Q13488 830 aa20.99■□□□□ 0.95
NFKB1-210ENST00000511926 CC2D2BQ6DHV5 1058 aa20.99■□□□□ 0.95
NFKB1-210ENST00000511926 ANKRD13DQ6ZTN6 518 aa20.99■□□□□ 0.95
NFKB1-210ENST00000511926 PLBD2Q8NHP8 589 aa20.99■□□□□ 0.95
NFKB1-210ENST00000511926 KLRG1Q96E93 195 aa20.99■□□□□ 0.95
NFKB1-210ENST00000511926 UTP14AQ9BVJ6 771 aaKnown RBP20.99■□□□□ 0.95
NFKB1-210ENST00000511926 IQCA1LA6NCM1 817 aa20.98■□□□□ 0.95
NFKB1-210ENST00000511926 HOXA10P31260 410 aaPredicted RBP20.98■□□□□ 0.95
NFKB1-210ENST00000511926 CCDC30Q5VVM6 783 aa20.98■□□□□ 0.95
NFKB1-210ENST00000511926 NLRP3Q96P20 1036 aa20.98■□□□□ 0.95
NFKB1-210ENST00000511926 WDR63Q8IWG1 891 aa20.97■□□□□ 0.95
NFKB1-210ENST00000511926 CRAMP1Q96RY5 1269 aa20.97■□□□□ 0.95
NFKB1-210ENST00000511926 PSMD1Q99460 953 aa20.97■□□□□ 0.95
NFKB1-210ENST00000511926 ELL2O00472 640 aaPredicted RBP20.95■□□□□ 0.94
NFKB1-210ENST00000511926 PPEF1O14829 653 aaPredicted RBP20.95■□□□□ 0.94
NFKB1-210ENST00000511926 GRIPAP1Q4V328 841 aa20.95■□□□□ 0.94
NFKB1-210ENST00000511926 SLC10A5Q5PT55 438 aa20.95■□□□□ 0.94
NFKB1-210ENST00000511926 CHADLQ6NUI6 762 aa20.95■□□□□ 0.94
NFKB1-210ENST00000511926 JDP2Q8WYK2 163 aa20.95■□□□□ 0.94
NFKB1-210ENST00000511926 L3MBTL3Q96JM7 780 aaPredicted RBP20.95■□□□□ 0.94
NFKB1-210ENST00000511926 TMX4Q9H1E5 349 aaPredicted RBP20.95■□□□□ 0.94
NFKB1-210ENST00000511926 ZNF541Q9H0D2 1346 aa20.95■□□□□ 0.94
NFKB1-210ENST00000511926 ANKRD36CQ5JPF3 1778 aa20.95■□□□□ 0.94
NFKB1-210ENST00000511926 TCERG1O14776 1098 aaKnown RBP20.94■□□□□ 0.94
NFKB1-210ENST00000511926 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
NFKB1-210ENST00000511926 NLRP10Q86W26 655 aa20.94■□□□□ 0.94
NFKB1-210ENST00000511926 FAM9BQ8IZU0 186 aa20.94■□□□□ 0.94
NFKB1-210ENST00000511926 C8orf58Q8NAV2 365 aa20.94■□□□□ 0.94
NFKB1-210ENST00000511926 SCN4AP35499 1836 aa20.94■□□□□ 0.94
NFKB1-210ENST00000511926 SNED1Q8TER0 1413 aa20.94■□□□□ 0.94
NFKB1-210ENST00000511926 DDX58O95786 925 aaKnown RBP20.93■□□□□ 0.94
NFKB1-210ENST00000511926 C3orf67Q6ZVT6 689 aa20.93■□□□□ 0.94
NFKB1-210ENST00000511926 FZD9O00144 591 aa20.92■□□□□ 0.94
NFKB1-210ENST00000511926 POTEIP0CG38 1075 aa20.92■□□□□ 0.94
NFKB1-210ENST00000511926 POTEJP0CG39 1038 aa20.92■□□□□ 0.94
NFKB1-210ENST00000511926 RIC3Q7Z5B4 369 aa20.92■□□□□ 0.94
NFKB1-210ENST00000511926 JMYQ8N9B5 988 aa20.92■□□□□ 0.94
NFKB1-210ENST00000511926 STK31Q9BXU1 1019 aa20.92■□□□□ 0.94
NFKB1-210ENST00000511926 TAF1DQ9H5J8 278 aaPredicted RBP20.92■□□□□ 0.94
NFKB1-210ENST00000511926 TRMT112Q9UI30 125 aaKnown RBP20.92■□□□□ 0.94
NFKB1-210ENST00000511926 SH3TC1Q8TE82 1336 aa20.92■□□□□ 0.94
NFKB1-210ENST00000511926 HSP90B1P14625 803 aaKnown RBP20.91■□□□□ 0.94
NFKB1-210ENST00000511926 EIF6P56537 245 aaKnown RBP20.91■□□□□ 0.94
NFKB1-210ENST00000511926 TRIM28Q13263 835 aaKnown RBP20.91■□□□□ 0.94
NFKB1-210ENST00000511926 IFFO2Q5TF58 517 aa20.91■□□□□ 0.94
NFKB1-210ENST00000511926 LDHDQ86WU2 507 aa20.91■□□□□ 0.94
NFKB1-210ENST00000511926 HACL1Q9UJ83 578 aa20.91■□□□□ 0.94
NFKB1-210ENST00000511926 TWISTNBQ3B726 338 aaPredicted RBP20.9■□□□□ 0.94
NFKB1-210ENST00000511926 EAPPQ56P03 285 aaPredicted RBP20.9■□□□□ 0.94
NFKB1-210ENST00000511926 LARGE2Q8N3Y3 721 aa20.9■□□□□ 0.94
NFKB1-210ENST00000511926 TSR2Q969E8 191 aaKnown RBP20.9■□□□□ 0.94
NFKB1-210ENST00000511926 ISCA1Q9BUE6 129 aa20.9■□□□□ 0.94
NFKB1-210ENST00000511926 ABCC4O15439 1325 aa20.89■□□□□ 0.93
NFKB1-210ENST00000511926 HCLS1P14317 486 aaPredicted RBP20.89■□□□□ 0.93
NFKB1-210ENST00000511926 GPC2Q8N158 579 aa20.89■□□□□ 0.93
NFKB1-210ENST00000511926 EPHX2P34913 555 aa20.88■□□□□ 0.93
NFKB1-210ENST00000511926 DDX46Q7L014 1031 aaKnown RBP20.88■□□□□ 0.93
NFKB1-210ENST00000511926 MYH16Q9H6N6 1097 aa20.88■□□□□ 0.93
NFKB1-210ENST00000511926 CLEC11AQ9Y240 323 aa20.88■□□□□ 0.93
NFKB1-210ENST00000511926 ATP6V0A2Q9Y487 856 aa20.88■□□□□ 0.93
NFKB1-210ENST00000511926 GJA3Q9Y6H8 435 aa20.88■□□□□ 0.93
NFKB1-210ENST00000511926 SLC51AQ86UW1 340 aa20.87■□□□□ 0.93
NFKB1-210ENST00000511926 TSPYL6Q8N831 410 aa20.87■□□□□ 0.93
NFKB1-210ENST00000511926 LAMB2P55268 1798 aa20.87■□□□□ 0.93
NFKB1-210ENST00000511926 PPIP5K2O43314 1243 aa20.86■□□□□ 0.93
NFKB1-210ENST00000511926 BBOX1O75936 387 aa20.86■□□□□ 0.93
NFKB1-210ENST00000511926 PNMA8AQ86V59 439 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms