RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 TRMT2AQ8IZ69 625 aaKnown RBP20.64■□□□□ 0.89
SIM1-204ENST00000511871 RIC1Q4ADV7 1423 aa20.63■□□□□ 0.89
SIM1-204ENST00000511871 KLRG2A4D1S0 409 aaPredicted RBP20.63■□□□□ 0.89
SIM1-204ENST00000511871 SLX4Q8IY92 1834 aa20.63■□□□□ 0.89
SIM1-204ENST00000511871 DDX58O95786 925 aaKnown RBP20.62■□□□□ 0.89
SIM1-204ENST00000511871 SRGNP10124 158 aa20.62■□□□□ 0.89
SIM1-204ENST00000511871 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
SIM1-204ENST00000511871 RNF123Q5XPI4 1314 aa20.61■□□□□ 0.89
SIM1-204ENST00000511871 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
SIM1-204ENST00000511871 ADCY9O60503 1353 aa20.6■□□□□ 0.89
SIM1-204ENST00000511871 ATP5J2-PTCD1G3V325 749 aa20.6■□□□□ 0.89
SIM1-204ENST00000511871 TRIM28Q13263 835 aaKnown RBP20.6■□□□□ 0.89
SIM1-204ENST00000511871 STYK1Q6J9G0 422 aa20.6■□□□□ 0.89
SIM1-204ENST00000511871 KSR2Q6VAB6 950 aa20.6■□□□□ 0.89
SIM1-204ENST00000511871 TTLL6Q8N841 843 aa20.6■□□□□ 0.89
SIM1-204ENST00000511871 ZNF622Q969S3 477 aaKnown RBP eCLIP20.6■□□□□ 0.89
SIM1-204ENST00000511871 MAP3K2Q9Y2U5 619 aa20.6■□□□□ 0.89
SIM1-204ENST00000511871 SBF1O95248 1867 aa20.59■□□□□ 0.89
SIM1-204ENST00000511871 PI4KAP2A4QPH2 592 aa20.59■□□□□ 0.89
SIM1-204ENST00000511871 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
SIM1-204ENST00000511871 FLIIQ13045 1269 aa20.59■□□□□ 0.89
SIM1-204ENST00000511871 SLC10A5Q5PT55 438 aa20.59■□□□□ 0.89
SIM1-204ENST00000511871 PI4KAP1Q8N8J0 262 aa20.59■□□□□ 0.89
SIM1-204ENST00000511871 MASTLQ96GX5 879 aa20.59■□□□□ 0.89
SIM1-204ENST00000511871 MYD88Q99836 296 aa20.59■□□□□ 0.89
SIM1-204ENST00000511871 METTL22Q9BUU2 404 aaPredicted RBP20.59■□□□□ 0.89
SIM1-204ENST00000511871 UTRNP46939 3433 aa20.58■□□□□ 0.89
SIM1-204ENST00000511871 TRMT112Q9UI30 125 aaKnown RBP20.58■□□□□ 0.89
SIM1-204ENST00000511871 CCDC88AQ3V6T2 1871 aa20.58■□□□□ 0.88
SIM1-204ENST00000511871 NPR1P16066 1061 aa20.57■□□□□ 0.88
SIM1-204ENST00000511871 CRY2Q49AN0 593 aa20.57■□□□□ 0.88
SIM1-204ENST00000511871 FER1L6Q2WGJ9 1857 aa20.57■□□□□ 0.88
SIM1-204ENST00000511871 SH3TC1Q8TE82 1336 aa20.57■□□□□ 0.88
SIM1-204ENST00000511871 SYNE4Q8N205 404 aa20.56■□□□□ 0.88
SIM1-204ENST00000511871 CNKSR1Q969H4 720 aa20.56■□□□□ 0.88
SIM1-204ENST00000511871 ZNF428Q96B54 188 aa20.56■□□□□ 0.88
SIM1-204ENST00000511871 YY1P25490 414 aa20.55■□□□□ 0.88
SIM1-204ENST00000511871 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
SIM1-204ENST00000511871 ARHGAP27Q6ZUM4 889 aa20.55■□□□□ 0.88
SIM1-204ENST00000511871 C3orf67Q6ZVT6 689 aa20.55■□□□□ 0.88
SIM1-204ENST00000511871 CCDC191Q8NCU4 936 aa20.55■□□□□ 0.88
SIM1-204ENST00000511871 NLRP3Q96P20 1036 aa20.54■□□□□ 0.88
SIM1-204ENST00000511871 TAF1P21675 1872 aa20.54■□□□□ 0.88
SIM1-204ENST00000511871 IGKV5-2P06315 115 aa20.53■□□□□ 0.88
SIM1-204ENST00000511871 HCLS1P14317 486 aaPredicted RBP20.53■□□□□ 0.88
SIM1-204ENST00000511871 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
SIM1-204ENST00000511871 FAM89AQ96GI7 184 aa20.53■□□□□ 0.88
SIM1-204ENST00000511871 MYH3P11055 1940 aa20.53■□□□□ 0.88
SIM1-204ENST00000511871 MRPL50Q8N5N7 158 aaKnown RBP20.53■□□□□ 0.88
SIM1-204ENST00000511871 DNAAF4Q8WXU2 420 aa20.53■□□□□ 0.88
SIM1-204ENST00000511871 CWC25Q9NXE8 425 aaPredicted RBP20.53■□□□□ 0.88
SIM1-204ENST00000511871 HOXA10P31260 410 aaPredicted RBP20.52■□□□□ 0.88
SIM1-204ENST00000511871 NEXNQ0ZGT2 675 aa20.52■□□□□ 0.88
SIM1-204ENST00000511871 CT47B1P0C2W7 299 aaPredicted RBP20.51■□□□□ 0.87
SIM1-204ENST00000511871 ALDH1B1P30837 517 aa20.51■□□□□ 0.87
SIM1-204ENST00000511871 ZBTB38Q8NAP3 1195 aaPredicted RBP20.51■□□□□ 0.87
SIM1-204ENST00000511871 SSH1Q8WYL5 1049 aa20.51■□□□□ 0.87
SIM1-204ENST00000511871 RPGRQ92834 1020 aaKnown RBP20.51■□□□□ 0.87
SIM1-204ENST00000511871 NEURL1BA8MQ27 555 aa20.5■□□□□ 0.87
SIM1-204ENST00000511871 C21orf2O43822 256 aa20.5■□□□□ 0.87
SIM1-204ENST00000511871 PCCAP05165 728 aaPredicted RBP20.5■□□□□ 0.87
SIM1-204ENST00000511871 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
SIM1-204ENST00000511871 C7orf43Q8WVR3 580 aa20.5■□□□□ 0.87
SIM1-204ENST00000511871 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
SIM1-204ENST00000511871 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
SIM1-204ENST00000511871 DICER1Q9UPY3 1922 aaKnown RBP20.5■□□□□ 0.87
SIM1-204ENST00000511871 CWF19L2Q2TBE0 894 aaKnown RBP20.49■□□□□ 0.87
SIM1-204ENST00000511871 ALDH1L2Q3SY69 923 aa20.49■□□□□ 0.87
SIM1-204ENST00000511871 CRAMP1Q96RY5 1269 aa20.49■□□□□ 0.87
SIM1-204ENST00000511871 F6X3S4 739 aa20.49■□□□□ 0.87
SIM1-204ENST00000511871 IRS4O14654 1257 aaPredicted RBP20.49■□□□□ 0.87
SIM1-204ENST00000511871 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
SIM1-204ENST00000511871 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
SIM1-204ENST00000511871 JARID2Q92833 1246 aaPredicted RBP20.47■□□□□ 0.87
SIM1-204ENST00000511871 NFKBIEO00221 500 aa20.46■□□□□ 0.87
SIM1-204ENST00000511871 RASSF7Q02833 373 aa20.46■□□□□ 0.87
SIM1-204ENST00000511871 SF3B3Q15393 1217 aaKnown RBP20.46■□□□□ 0.87
SIM1-204ENST00000511871 BCL2L13Q9BXK5 485 aa20.46■□□□□ 0.87
SIM1-204ENST00000511871 CDHR2Q9BYE9 1310 aa20.46■□□□□ 0.87
SIM1-204ENST00000511871 GCKRQ14397 625 aa20.45■□□□□ 0.87
SIM1-204ENST00000511871 BEND3Q5T5X7 828 aa20.45■□□□□ 0.87
SIM1-204ENST00000511871 SOGA3Q5TF21 947 aa20.45■□□□□ 0.87
SIM1-204ENST00000511871 H7C1W4 665 aa20.45■□□□□ 0.86
SIM1-204ENST00000511871 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
SIM1-204ENST00000511871 ABCC4O15439 1325 aa20.45■□□□□ 0.86
SIM1-204ENST00000511871 PTPRCP08575 1304 aa20.45■□□□□ 0.86
SIM1-204ENST00000511871 HSP90B1P14625 803 aaKnown RBP20.44■□□□□ 0.86
SIM1-204ENST00000511871 CCDC93Q567U6 631 aa20.44■□□□□ 0.86
SIM1-204ENST00000511871 PDE8AO60658 829 aa20.43■□□□□ 0.86
SIM1-204ENST00000511871 PRELPP51888 382 aa20.43■□□□□ 0.86
SIM1-204ENST00000511871 C9orf131Q5VYM1 1079 aa20.43■□□□□ 0.86
SIM1-204ENST00000511871 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
SIM1-204ENST00000511871 DDX46Q7L014 1031 aaKnown RBP20.43■□□□□ 0.86
SIM1-204ENST00000511871 LTBP3Q9NS15 1303 aa20.43■□□□□ 0.86
SIM1-204ENST00000511871 SNED1Q8TER0 1413 aa20.43■□□□□ 0.86
SIM1-204ENST00000511871 COL4A1P02462 1669 aa20.43■□□□□ 0.86
SIM1-204ENST00000511871 TIAM2Q8IVF5 1701 aa20.43■□□□□ 0.86
SIM1-204ENST00000511871 RARSP54136 660 aaKnown RBP20.42■□□□□ 0.86
SIM1-204ENST00000511871 BRPF1P55201 1214 aaPredicted RBP20.42■□□□□ 0.86
SIM1-204ENST00000511871 PPEF1O14829 653 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms