RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 SRGNP10124 158 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 SLC10A5Q5PT55 438 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 STYK1Q6J9G0 422 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 TTLL6Q8N841 843 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 CNKSR1Q969H4 720 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 MASTLQ96GX5 879 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 MYD88Q99836 296 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 TRMT112Q9UI30 125 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 NUP98P52948 1817 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 SH3TC1Q8TE82 1336 aa9.13□□□□□ -0.95
PDLIM5-215ENST00000511586 NPR1P16066 1061 aa9.13□□□□□ -0.95
PDLIM5-215ENST00000511586 NEXNQ0ZGT2 675 aa9.13□□□□□ -0.95
PDLIM5-215ENST00000511586 CCDC191Q8NCU4 936 aa9.13□□□□□ -0.95
PDLIM5-215ENST00000511586 NLRP3Q96P20 1036 aa9.13□□□□□ -0.95
PDLIM5-215ENST00000511586 ADCY9O60503 1353 aa9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 ABCC12Q96J65 1359 aa9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 KIAA1551Q9HCM1 1747 aa9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 CRY2Q49AN0 593 aa9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 ZBTB38Q8NAP3 1195 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 FAM89AQ96GI7 184 aa9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 CWC25Q9NXE8 425 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 RIC1Q4ADV7 1423 aa9.12□□□□□ -0.95
PDLIM5-215ENST00000511586 ZBED9Q6R2W3 1325 aa9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 IGKV5-2P06315 115 aa9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 CENPBP07199 599 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 HCLS1P14317 486 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 HSP90B1P14625 803 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 ALDH1B1P30837 517 aa9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 ALDH1L2Q3SY69 923 aa9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 ARHGAP27Q6ZUM4 889 aa9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 SYNE4Q8N205 404 aa9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 DNAAF4Q8WXU2 420 aa9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 SSH1Q8WYL5 1049 aa9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-215ENST00000511586 NEURL1BA8MQ27 555 aa9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 F6X3S4 739 aa9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 PCCAP05165 728 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 YY1P25490 414 aa9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 HOXA10P31260 410 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 CWF19L2Q2TBE0 894 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 RTL5Q5HYW3 569 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 PRPF40BQ6NWY9 871 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 LINS1Q8NG48 757 aa9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 RBM17Q96I25 401 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 BCL2L13Q9BXK5 485 aa9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 SMC4Q9NTJ3 1288 aa9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 ANKRD31Q8N7Z5 1873 aa9.1□□□□□ -0.95
PDLIM5-215ENST00000511586 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 PTPRCP08575 1304 aa9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 GOLGB1Q14789 3259 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 IRS4O14654 1257 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 C21orf2O43822 256 aa9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 SOGA3Q5TF21 947 aa9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 C3orf67Q6ZVT6 689 aa9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 CRAMP1Q96RY5 1269 aa9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 CACNA1FO60840 1977 aa9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 ANKRD36CQ5JPF3 1778 aa9.09□□□□□ -0.95
PDLIM5-215ENST00000511586 UTRNP46939 3433 aa9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 H7C1W4 665 aa9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 PDE8AO60658 829 aa9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 BRPF1P55201 1214 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 GCKRQ14397 625 aa9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 SF3B3Q15393 1217 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 BEND3Q5T5X7 828 aa9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 SLC4A10Q6U841 1118 aa9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 DDX46Q7L014 1031 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 C7orf43Q8WVR3 580 aa9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 JARID2Q92833 1246 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 BRCA1P38398 1863 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-215ENST00000511586 CDHR2Q9BYE9 1310 aa9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 DLEC1Q9Y238 1755 aa9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 ALDH1L1O75891 902 aa9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 BBOX1O75936 387 aa9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 UBE3BQ7Z3V4 1068 aa9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 SRCIN1Q9C0H9 1055 aa9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 TMX4Q9H1E5 349 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 NOB1Q9ULX3 412 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 COL11A2P13942 1736 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-215ENST00000511586 PPEF1O14829 653 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 GRAPQ13588 217 aa9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 CCDC152Q4G0S7 254 aa9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 GRIPAP1Q4V328 841 aa9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 CCDC93Q567U6 631 aa9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 CC2D2BQ6DHV5 1058 aa9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 RTKN2Q8IZC4 609 aa9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 GRAPLQ8TC17 118 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 TNRC6CQ9HCJ0 1690 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-215ENST00000511586 ABCC4O15439 1325 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 KIF16BQ96L93 1317 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 ARFGEF1Q9Y6D6 1849 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 NFKBIEO00221 500 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 GRM8O00222 908 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 IPO8O15397 1037 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 CASP7P55210 303 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms