RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PDE6BP35913 854 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
COL6A6-203ENST00000511332 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 NLGN2Q8NFZ4 835 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 DNAAF4Q8WXU2 420 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
COL6A6-203ENST00000511332 MYD88Q99836 296 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 UTP14AQ9BVJ6 771 aaKnown RBP16.38■□□□□ 0.21
COL6A6-203ENST00000511332 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
COL6A6-203ENST00000511332 RARSP54136 660 aaKnown RBP16.37■□□□□ 0.21
COL6A6-203ENST00000511332 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
COL6A6-203ENST00000511332 BRPF1P55201 1214 aaPredicted RBP16.36■□□□□ 0.21
COL6A6-203ENST00000511332 CWC25Q9NXE8 425 aaPredicted RBP16.36■□□□□ 0.21
COL6A6-203ENST00000511332 SH3TC1Q8TE82 1336 aa16.36■□□□□ 0.21
COL6A6-203ENST00000511332 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
COL6A6-203ENST00000511332 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
COL6A6-203ENST00000511332 ERFEQ4G0M1 354 aa16.34■□□□□ 0.21
COL6A6-203ENST00000511332 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
COL6A6-203ENST00000511332 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
COL6A6-203ENST00000511332 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
COL6A6-203ENST00000511332 NEURL1BA8MQ27 555 aa16.33■□□□□ 0.2
COL6A6-203ENST00000511332 F6X3S4 739 aa16.33■□□□□ 0.2
COL6A6-203ENST00000511332 H0YIN7 160 aa16.33■□□□□ 0.2
COL6A6-203ENST00000511332 IGKV5-2P06315 115 aa16.33■□□□□ 0.2
COL6A6-203ENST00000511332 HSP90B1P14625 803 aaKnown RBP16.33■□□□□ 0.2
COL6A6-203ENST00000511332 DPEP1P16444 411 aa16.33■□□□□ 0.2
COL6A6-203ENST00000511332 C2CD5Q86YS7 1000 aa16.33■□□□□ 0.2
COL6A6-203ENST00000511332 A0A0G2JLW4 131 aa16.32■□□□□ 0.2
COL6A6-203ENST00000511332 CHRNA5P30532 468 aa16.32■□□□□ 0.2
COL6A6-203ENST00000511332 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
COL6A6-203ENST00000511332 CHD4Q14839 1912 aa16.31■□□□□ 0.2
COL6A6-203ENST00000511332 IPO8O15397 1037 aaKnown RBP16.31■□□□□ 0.2
COL6A6-203ENST00000511332 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
COL6A6-203ENST00000511332 CWF19L2Q2TBE0 894 aaKnown RBP16.31■□□□□ 0.2
COL6A6-203ENST00000511332 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
COL6A6-203ENST00000511332 API5Q9BZZ5 524 aaKnown RBP16.31■□□□□ 0.2
COL6A6-203ENST00000511332 PIM2Q9P1W9 311 aa16.31■□□□□ 0.2
COL6A6-203ENST00000511332 SLX4Q8IY92 1834 aa16.31■□□□□ 0.2
COL6A6-203ENST00000511332 CDHR2Q9BYE9 1310 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
COL6A6-203ENST00000511332 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 SRGNP10124 158 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 NPR1P16066 1061 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 GCKRQ14397 625 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 SLC10A5Q5PT55 438 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 BEND3Q5T5X7 828 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 STYK1Q6J9G0 422 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 ARHGAP45Q92619 1136 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 FAM89AQ96GI7 184 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 NLRP3Q96P20 1036 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 SRCIN1Q9C0H9 1055 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 NOB1Q9ULX3 412 aaKnown RBP16.3■□□□□ 0.2
COL6A6-203ENST00000511332 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
COL6A6-203ENST00000511332 GPR162Q16538 588 aa16.29■□□□□ 0.2
COL6A6-203ENST00000511332 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
COL6A6-203ENST00000511332 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
COL6A6-203ENST00000511332 MASTLQ96GX5 879 aa16.29■□□□□ 0.2
COL6A6-203ENST00000511332 IRS4O14654 1257 aaPredicted RBP16.28■□□□□ 0.2
COL6A6-203ENST00000511332 BCAR3O75815 825 aa16.28■□□□□ 0.2
COL6A6-203ENST00000511332 KCNA3P22001 575 aa16.28■□□□□ 0.2
COL6A6-203ENST00000511332 DALRD3Q5D0E6 543 aaKnown RBP16.28■□□□□ 0.2
COL6A6-203ENST00000511332 CNKSR1Q969H4 720 aa16.28■□□□□ 0.2
COL6A6-203ENST00000511332 ZNF622Q969S3 477 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL6A6-203ENST00000511332 TAF1P21675 1872 aa16.28■□□□□ 0.2
COL6A6-203ENST00000511332 FER1L6Q2WGJ9 1857 aa16.28■□□□□ 0.2
COL6A6-203ENST00000511332 LRRC37AA6NMS7 1700 aa16.28■□□□□ 0.2
COL6A6-203ENST00000511332 HCLS1P14317 486 aaPredicted RBP16.27■□□□□ 0.2
COL6A6-203ENST00000511332 RTL5Q5HYW3 569 aaPredicted RBP16.27■□□□□ 0.2
COL6A6-203ENST00000511332 UBE3BQ7Z3V4 1068 aa16.27■□□□□ 0.2
COL6A6-203ENST00000511332 TTLL6Q8N841 843 aa16.27■□□□□ 0.2
COL6A6-203ENST00000511332 FRAT1Q92837 279 aaPredicted RBP16.27■□□□□ 0.2
COL6A6-203ENST00000511332 ABCC4O15439 1325 aa16.26■□□□□ 0.19
COL6A6-203ENST00000511332 CCT4P50991 539 aaKnown RBP16.26■□□□□ 0.19
COL6A6-203ENST00000511332 ZKSCAN2Q63HK3 967 aa16.26■□□□□ 0.19
COL6A6-203ENST00000511332 ATF7IPQ6VMQ6 1270 aa16.26■□□□□ 0.19
COL6A6-203ENST00000511332 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
COL6A6-203ENST00000511332 RBM17Q96I25 401 aaKnown RBP16.26■□□□□ 0.19
COL6A6-203ENST00000511332 RCAN3Q9UKA8 241 aa16.26■□□□□ 0.19
COL6A6-203ENST00000511332 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
COL6A6-203ENST00000511332 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
COL6A6-203ENST00000511332 GRM8O00222 908 aa16.25■□□□□ 0.19
COL6A6-203ENST00000511332 GRIN3BO60391 1043 aa16.25■□□□□ 0.19
COL6A6-203ENST00000511332 PDE8AO60658 829 aa16.25■□□□□ 0.19
COL6A6-203ENST00000511332 TRIM27P14373 513 aa16.25■□□□□ 0.19
COL6A6-203ENST00000511332 YBX3P16989 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL6A6-203ENST00000511332 ALDH1B1P30837 517 aa16.25■□□□□ 0.19
COL6A6-203ENST00000511332 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
COL6A6-203ENST00000511332 H7C1W4 665 aa16.24■□□□□ 0.19
COL6A6-203ENST00000511332 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
COL6A6-203ENST00000511332 PRPF40BQ6NWY9 871 aaKnown RBP16.24■□□□□ 0.19
COL6A6-203ENST00000511332 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
COL6A6-203ENST00000511332 CCDC88AQ3V6T2 1871 aa16.24■□□□□ 0.19
COL6A6-203ENST00000511332 GOLGB1Q14789 3259 aaKnown RBP16.24■□□□□ 0.19
COL6A6-203ENST00000511332 SBF1O95248 1867 aa16.23■□□□□ 0.19
COL6A6-203ENST00000511332 CTSWP56202 376 aa16.23■□□□□ 0.19
COL6A6-203ENST00000511332 SF3B3Q15393 1217 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms