RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 PLSCR1O15162 318 aa10.35□□□□□ -0.75
SMAD1-210ENST00000511255 ZPR1O75312 459 aa10.35□□□□□ -0.75
SMAD1-210ENST00000511255 FUT2Q10981 343 aa10.35□□□□□ -0.75
SMAD1-210ENST00000511255 R3HDM1Q15032 1099 aaKnown RBP10.35□□□□□ -0.75
SMAD1-210ENST00000511255 SSTR3P32745 418 aaPredicted RBP10.34□□□□□ -0.75
SMAD1-210ENST00000511255 SULT6B1Q6IMI4 303 aa10.34□□□□□ -0.75
SMAD1-210ENST00000511255 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
SMAD1-210ENST00000511255 NHSQ6T4R5 1651 aa10.34□□□□□ -0.75
SMAD1-210ENST00000511255 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
SMAD1-210ENST00000511255 U2SURPO15042 1029 aaKnown RBP10.33□□□□□ -0.76
SMAD1-210ENST00000511255 CYP27B1O15528 508 aa10.33□□□□□ -0.76
SMAD1-210ENST00000511255 DIAPH1O60610 1272 aaKnown RBP10.33□□□□□ -0.76
SMAD1-210ENST00000511255 IL13P35225 146 aa10.33□□□□□ -0.76
SMAD1-210ENST00000511255 DDX10Q13206 875 aaKnown RBP10.33□□□□□ -0.76
SMAD1-210ENST00000511255 TTLL12Q14166 644 aaPredicted RBP10.33□□□□□ -0.76
SMAD1-210ENST00000511255 TXNRD1Q16881 649 aa10.33□□□□□ -0.76
SMAD1-210ENST00000511255 AEBP1Q8IUX7 1158 aa10.33□□□□□ -0.76
SMAD1-210ENST00000511255 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
SMAD1-210ENST00000511255 CFAP53Q96M91 514 aa10.33□□□□□ -0.76
SMAD1-210ENST00000511255 PRKD2Q9BZL6 878 aa10.33□□□□□ -0.76
SMAD1-210ENST00000511255 HMOX1P09601 288 aa10.32□□□□□ -0.76
SMAD1-210ENST00000511255 PDE4DQ08499 809 aa10.32□□□□□ -0.76
SMAD1-210ENST00000511255 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
SMAD1-210ENST00000511255 MORN1Q5T089 497 aa10.32□□□□□ -0.76
SMAD1-210ENST00000511255 ZNF787Q6DD87 383 aa10.32□□□□□ -0.76
SMAD1-210ENST00000511255 ZNF530Q6P9A1 599 aaPredicted RBP10.32□□□□□ -0.76
SMAD1-210ENST00000511255 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
SMAD1-210ENST00000511255 IFNL2Q8IZJ0 200 aa10.32□□□□□ -0.76
SMAD1-210ENST00000511255 DOT1LQ8TEK3 1739 aa10.32□□□□□ -0.76
SMAD1-210ENST00000511255 SHANK3Q9BYB0 1731 aa10.32□□□□□ -0.76
SMAD1-210ENST00000511255 PHKG2P15735 406 aa10.31□□□□□ -0.76
SMAD1-210ENST00000511255 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
SMAD1-210ENST00000511255 AMOTQ4VCS5 1084 aa10.31□□□□□ -0.76
SMAD1-210ENST00000511255 MPRIPQ6WCQ1 1025 aa10.31□□□□□ -0.76
SMAD1-210ENST00000511255 ZNF775Q96BV0 537 aaPredicted RBP10.31□□□□□ -0.76
SMAD1-210ENST00000511255 RREB1Q92766 1687 aa10.31□□□□□ -0.76
SMAD1-210ENST00000511255 PKD1L3Q7Z443 1732 aa10.3□□□□□ -0.76
SMAD1-210ENST00000511255 PPP2R1AP30153 589 aa10.3□□□□□ -0.76
SMAD1-210ENST00000511255 C1orf141Q5JVX7 400 aa10.3□□□□□ -0.76
SMAD1-210ENST00000511255 STK32BQ9NY57 414 aa10.3□□□□□ -0.76
SMAD1-210ENST00000511255 BTAF1O14981 1849 aa10.3□□□□□ -0.76
SMAD1-210ENST00000511255 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
SMAD1-210ENST00000511255 KDM4AO75164 1064 aa10.29□□□□□ -0.76
SMAD1-210ENST00000511255 HSP90AB1P08238 724 aaKnown RBP10.29□□□□□ -0.76
SMAD1-210ENST00000511255 MS4A1P11836 297 aa10.29□□□□□ -0.76
SMAD1-210ENST00000511255 NUDCQ9Y266 331 aa10.29□□□□□ -0.76
SMAD1-210ENST00000511255 SLC27A5Q9Y2P5 690 aa10.29□□□□□ -0.76
SMAD1-210ENST00000511255 RGPD3A6NKT7 1758 aaPredicted RBP10.29□□□□□ -0.76
SMAD1-210ENST00000511255 RGPD4Q7Z3J3 1758 aa10.29□□□□□ -0.76
SMAD1-210ENST00000511255 PLEKHG2Q9H7P9 1386 aa10.28□□□□□ -0.76
SMAD1-210ENST00000511255 TLL1O43897 1013 aa10.28□□□□□ -0.76
SMAD1-210ENST00000511255 NR1I2O75469 434 aa10.28□□□□□ -0.76
SMAD1-210ENST00000511255 TMOD3Q9NYL9 352 aa10.28□□□□□ -0.76
SMAD1-210ENST00000511255 KDRP35968 1356 aa10.27□□□□□ -0.76
SMAD1-210ENST00000511255 KCNQ4P56696 695 aa10.27□□□□□ -0.77
SMAD1-210ENST00000511255 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
SMAD1-210ENST00000511255 PPP1R18Q6NYC8 613 aa10.27□□□□□ -0.77
SMAD1-210ENST00000511255 PIGBQ92521 554 aa10.27□□□□□ -0.77
SMAD1-210ENST00000511255 HLA-CQ95604 372 aa10.27□□□□□ -0.77
SMAD1-210ENST00000511255 THAP11Q96EK4 314 aa10.27□□□□□ -0.77
SMAD1-210ENST00000511255 CCNL1Q9UK58 526 aaPredicted RBP10.27□□□□□ -0.77
SMAD1-210ENST00000511255 COL3A1P02461 1466 aaPredicted RBP10.27□□□□□ -0.77
SMAD1-210ENST00000511255 PALLDQ8WX93 1383 aa10.26□□□□□ -0.77
SMAD1-210ENST00000511255 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
SMAD1-210ENST00000511255 CABP4P57796 275 aa10.26□□□□□ -0.77
SMAD1-210ENST00000511255 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMAD1-210ENST00000511255 SLC15A2Q16348 729 aa10.26□□□□□ -0.77
SMAD1-210ENST00000511255 SMARCC1Q92922 1105 aaPredicted RBP10.26□□□□□ -0.77
SMAD1-210ENST00000511255 DCAF5Q96JK2 942 aa10.26□□□□□ -0.77
SMAD1-210ENST00000511255 LRRC4BQ9NT99 713 aa10.26□□□□□ -0.77
SMAD1-210ENST00000511255 V9GY48 417 aaPredicted RBP10.26□□□□□ -0.77
SMAD1-210ENST00000511255 TOGARAM1Q9Y4F4 1720 aa10.25□□□□□ -0.77
SMAD1-210ENST00000511255 AKAP4Q5JQC9 854 aa10.25□□□□□ -0.77
SMAD1-210ENST00000511255 ERVV-2B6SEH9 535 aa10.24□□□□□ -0.77
SMAD1-210ENST00000511255 HOXA2O43364 376 aa10.24□□□□□ -0.77
SMAD1-210ENST00000511255 PRKAR2BP31323 418 aa10.24□□□□□ -0.77
SMAD1-210ENST00000511255 RALBP1Q15311 655 aa10.24□□□□□ -0.77
SMAD1-210ENST00000511255 ZNF827Q17R98 1081 aa10.24□□□□□ -0.77
SMAD1-210ENST00000511255 MTHFSDQ2M296 383 aaKnown RBP10.24□□□□□ -0.77
SMAD1-210ENST00000511255 SPIRE2Q8WWL2 714 aa10.24□□□□□ -0.77
SMAD1-210ENST00000511255 BEGAINQ9BUH8 593 aa10.24□□□□□ -0.77
SMAD1-210ENST00000511255 TFCP2L1Q9NZI6 479 aa10.24□□□□□ -0.77
SMAD1-210ENST00000511255 KDM6AO15550 1401 aaPredicted RBP10.24□□□□□ -0.77
SMAD1-210ENST00000511255 USP46P62068 366 aa10.23□□□□□ -0.77
SMAD1-210ENST00000511255 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
SMAD1-210ENST00000511255 ASAP1Q9ULH1 1129 aa10.23□□□□□ -0.77
SMAD1-210ENST00000511255 ITGB4P16144 1822 aa10.23□□□□□ -0.77
SMAD1-210ENST00000511255 RNMTO43148 476 aaKnown RBP10.22□□□□□ -0.77
SMAD1-210ENST00000511255 ZBTB7AO95365 584 aa10.22□□□□□ -0.77
SMAD1-210ENST00000511255 NEFMP07197 916 aa10.22□□□□□ -0.77
SMAD1-210ENST00000511255 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
SMAD1-210ENST00000511255 GRIPAP1Q4V328 841 aa10.22□□□□□ -0.77
SMAD1-210ENST00000511255 BRICD5Q6PL45 260 aa10.22□□□□□ -0.77
SMAD1-210ENST00000511255 GAS2L2Q8NHY3 880 aa10.22□□□□□ -0.77
SMAD1-210ENST00000511255 PDGFDQ9GZP0 370 aaPredicted RBP10.22□□□□□ -0.77
SMAD1-210ENST00000511255 RSPH6AQ9H0K4 717 aa10.22□□□□□ -0.77
SMAD1-210ENST00000511255 SPON1Q9HCB6 807 aa10.22□□□□□ -0.77
SMAD1-210ENST00000511255 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.22□□□□□ -0.77
SMAD1-210ENST00000511255 PPP1R1BQ9UD71 204 aaPredicted RBP10.22□□□□□ -0.77
SMAD1-210ENST00000511255 SALL2Q9Y467 1007 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms