RNA–Protein interactions for RNA: ENST00000511097.6

CAST-235, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-235ENST00000511097 SLC10A5Q5PT55 438 aa21.95■■□□□ 1.1
CAST-235ENST00000511097 PHAXQ9H814 394 aaKnown RBP21.95■■□□□ 1.1
CAST-235ENST00000511097 SPINK5Q9NQ38 1064 aaPredicted RBP21.95■■□□□ 1.1
CAST-235ENST00000511097 SOGA3Q5TF21 947 aa21.94■■□□□ 1.1
CAST-235ENST00000511097 ISCA1Q9BUE6 129 aa21.94■■□□□ 1.1
CAST-235ENST00000511097 COL11A2P13942 1736 aaPredicted RBP21.93■■□□□ 1.1
CAST-235ENST00000511097 VAMP4O75379 141 aa21.93■■□□□ 1.1
CAST-235ENST00000511097 ALDH1B1P30837 517 aa21.93■■□□□ 1.1
CAST-235ENST00000511097 PRPF40BQ6NWY9 871 aaKnown RBP21.93■■□□□ 1.1
CAST-235ENST00000511097 RIC3Q7Z5B4 369 aa21.93■■□□□ 1.1
CAST-235ENST00000511097 HOXA10P31260 410 aaPredicted RBP21.92■■□□□ 1.1
CAST-235ENST00000511097 EXOSC9Q06265 439 aaKnown RBP21.92■■□□□ 1.1
CAST-235ENST00000511097 SH3TC1Q8TE82 1336 aa21.91■■□□□ 1.1
CAST-235ENST00000511097 NLRP3Q96P20 1036 aa21.91■■□□□ 1.1
CAST-235ENST00000511097 TRMT112Q9UI30 125 aaKnown RBP21.91■■□□□ 1.1
CAST-235ENST00000511097 ANKRD36CQ5JPF3 1778 aa21.9■■□□□ 1.1
CAST-235ENST00000511097 E9PSI1 815 aa21.89■■□□□ 1.1
CAST-235ENST00000511097 C21orf2O43822 256 aa21.89■■□□□ 1.1
CAST-235ENST00000511097 SLC4A2P04920 1241 aa21.89■■□□□ 1.1
CAST-235ENST00000511097 KSR2Q6VAB6 950 aa21.89■■□□□ 1.1
CAST-235ENST00000511097 RPGRQ92834 1020 aaKnown RBP21.89■■□□□ 1.1
CAST-235ENST00000511097 C7orf43Q8WVR3 580 aa21.88■■□□□ 1.09
CAST-235ENST00000511097 METTL22Q9BUU2 404 aaPredicted RBP21.88■■□□□ 1.09
CAST-235ENST00000511097 LTBP3Q9NS15 1303 aa21.88■■□□□ 1.09
CAST-235ENST00000511097 LMNB1P20700 586 aa21.87■■□□□ 1.09
CAST-235ENST00000511097 C9orf131Q5VYM1 1079 aa21.87■■□□□ 1.09
CAST-235ENST00000511097 CCDC191Q8NCU4 936 aa21.87■■□□□ 1.09
CAST-235ENST00000511097 CRAMP1Q96RY5 1269 aa21.87■■□□□ 1.09
CAST-235ENST00000511097 TNRC6CQ9HCJ0 1690 aaKnown RBP21.87■■□□□ 1.09
CAST-235ENST00000511097 ZC3H4Q9UPT8 1303 aaKnown RBP21.87■■□□□ 1.09
CAST-235ENST00000511097 ATP5J2-PTCD1G3V325 749 aa21.87■■□□□ 1.09
CAST-235ENST00000511097 NFKBIEO00221 500 aa21.87■■□□□ 1.09
CAST-235ENST00000511097 PI4KAP2A4QPH2 592 aa21.86■■□□□ 1.09
CAST-235ENST00000511097 HSP90B1P14625 803 aaKnown RBP21.86■■□□□ 1.09
CAST-235ENST00000511097 FLIIQ13045 1269 aa21.86■■□□□ 1.09
CAST-235ENST00000511097 PI4KAP1Q8N8J0 262 aa21.86■■□□□ 1.09
CAST-235ENST00000511097 RBM17Q96I25 401 aaKnown RBP21.86■■□□□ 1.09
CAST-235ENST00000511097 MAP3K2Q9Y2U5 619 aa21.86■■□□□ 1.09
CAST-235ENST00000511097 ARFGEF2Q9Y6D5 1785 aa21.85■■□□□ 1.09
CAST-235ENST00000511097 TCERG1O14776 1098 aaKnown RBP21.85■■□□□ 1.09
CAST-235ENST00000511097 CCDC93Q567U6 631 aa21.85■■□□□ 1.09
CAST-235ENST00000511097 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
CAST-235ENST00000511097 ZBTB38Q8NAP3 1195 aaPredicted RBP21.85■■□□□ 1.09
CAST-235ENST00000511097 MYD88Q99836 296 aa21.85■■□□□ 1.09
CAST-235ENST00000511097 TAOK3Q9H2K8 898 aa21.85■■□□□ 1.09
CAST-235ENST00000511097 RNF181Q9P0P0 153 aa21.85■■□□□ 1.09
CAST-235ENST00000511097 RASSF7Q02833 373 aa21.84■■□□□ 1.09
CAST-235ENST00000511097 SLFN5Q08AF3 891 aa21.84■■□□□ 1.09
CAST-235ENST00000511097 GRIPAP1Q4V328 841 aa21.84■■□□□ 1.09
CAST-235ENST00000511097 C3orf67Q6ZVT6 689 aa21.84■■□□□ 1.09
CAST-235ENST00000511097 RTKN2Q8IZC4 609 aa21.84■■□□□ 1.09
CAST-235ENST00000511097 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.08
CAST-235ENST00000511097 NEXNQ0ZGT2 675 aa21.83■■□□□ 1.08
CAST-235ENST00000511097 G2E3Q7L622 706 aa21.83■■□□□ 1.08
CAST-235ENST00000511097 FAM89AQ96GI7 184 aa21.83■■□□□ 1.08
CAST-235ENST00000511097 CWC25Q9NXE8 425 aaPredicted RBP21.83■■□□□ 1.08
CAST-235ENST00000511097 ZNF219Q9P2Y4 722 aaPredicted RBP21.83■■□□□ 1.08
CAST-235ENST00000511097 SLX4Q8IY92 1834 aa21.83■■□□□ 1.08
CAST-235ENST00000511097 SYNE4Q8N205 404 aa21.82■■□□□ 1.08
CAST-235ENST00000511097 ZNF428Q96B54 188 aa21.82■■□□□ 1.08
CAST-235ENST00000511097 GPBP1L1Q9HC44 474 aaPredicted RBP21.82■■□□□ 1.08
CAST-235ENST00000511097 FKBP5Q13451 457 aaPredicted RBP21.81■■□□□ 1.08
CAST-235ENST00000511097 SF3B3Q15393 1217 aaKnown RBP21.81■■□□□ 1.08
CAST-235ENST00000511097 PCCAP05165 728 aaPredicted RBP21.8■■□□□ 1.08
CAST-235ENST00000511097 PRELPP51888 382 aa21.8■■□□□ 1.08
CAST-235ENST00000511097 TRMT2AQ8IZ69 625 aaKnown RBP21.8■■□□□ 1.08
CAST-235ENST00000511097 IRS4O14654 1257 aaPredicted RBP21.79■■□□□ 1.08
CAST-235ENST00000511097 BBOX1O75936 387 aa21.79■■□□□ 1.08
CAST-235ENST00000511097 IGKV5-2P06315 115 aa21.79■■□□□ 1.08
CAST-235ENST00000511097 SNED1Q8TER0 1413 aa21.79■■□□□ 1.08
CAST-235ENST00000511097 FKBP4Q02790 459 aaKnown RBP eCLIP21.78■■□□□ 1.08
CAST-235ENST00000511097 DDX46Q7L014 1031 aaKnown RBP21.78■■□□□ 1.08
CAST-235ENST00000511097 DNAAF4Q8WXU2 420 aa21.78■■□□□ 1.08
CAST-235ENST00000511097 ABCC4O15439 1325 aa21.78■■□□□ 1.08
CAST-235ENST00000511097 FER1L6Q2WGJ9 1857 aa21.77■■□□□ 1.08
CAST-235ENST00000511097 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.08
CAST-235ENST00000511097 TMC4Q7Z404 712 aa21.77■■□□□ 1.08
CAST-235ENST00000511097 PSMD1Q99460 953 aa21.77■■□□□ 1.08
CAST-235ENST00000511097 CACNA1FO60840 1977 aa21.77■■□□□ 1.07
CAST-235ENST00000511097 NEURL1BA8MQ27 555 aa21.76■■□□□ 1.07
CAST-235ENST00000511097 CT47B1P0C2W7 299 aaPredicted RBP21.76■■□□□ 1.07
CAST-235ENST00000511097 GRAPQ13588 217 aa21.76■■□□□ 1.07
CAST-235ENST00000511097 LINS1Q8NG48 757 aa21.76■■□□□ 1.07
CAST-235ENST00000511097 GRAPLQ8TC17 118 aaPredicted RBP21.76■■□□□ 1.07
CAST-235ENST00000511097 CDCA7LQ96GN5 454 aa21.76■■□□□ 1.07
CAST-235ENST00000511097 TMX4Q9H1E5 349 aaPredicted RBP21.76■■□□□ 1.07
CAST-235ENST00000511097 ATP6V0A2Q9Y487 856 aa21.76■■□□□ 1.07
CAST-235ENST00000511097 CDHR2Q9BYE9 1310 aa21.76■■□□□ 1.07
CAST-235ENST00000511097 SBF1O95248 1867 aa21.75■■□□□ 1.07
CAST-235ENST00000511097 RTL5Q5HYW3 569 aaPredicted RBP21.75■■□□□ 1.07
CAST-235ENST00000511097 KDM2BQ8NHM5 1336 aa21.75■■□□□ 1.07
CAST-235ENST00000511097 PDE8AO60658 829 aa21.74■■□□□ 1.07
CAST-235ENST00000511097 CWF19L2Q2TBE0 894 aaKnown RBP21.74■■□□□ 1.07
CAST-235ENST00000511097 OLFM4Q6UX06 510 aa21.74■■□□□ 1.07
CAST-235ENST00000511097 ZNF526Q8TF50 670 aaPredicted RBP21.74■■□□□ 1.07
CAST-235ENST00000511097 SP8Q8IXZ3 490 aa21.74■■□□□ 1.07
CAST-235ENST00000511097 DDX60Q8IY21 1712 aaKnown RBP21.73■■□□□ 1.07
CAST-235ENST00000511097 GCKRQ14397 625 aa21.73■■□□□ 1.07
CAST-235ENST00000511097 CACNA1SQ13698 1873 aa21.72■■□□□ 1.07
CAST-235ENST00000511097 GLTPD2A6NH11 291 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms