RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 HSH2DQ96JZ2 352 aa9.4□□□□□ -0.9
CHD1-206ENST00000511067 A0A1W2PNR3 127 aa9.39□□□□□ -0.91
CHD1-206ENST00000511067 WIPF1O43516 503 aa9.39□□□□□ -0.91
CHD1-206ENST00000511067 F11P03951 625 aa9.39□□□□□ -0.91
CHD1-206ENST00000511067 IDH3AP50213 366 aa9.39□□□□□ -0.91
CHD1-206ENST00000511067 ARSDP51689 593 aa9.39□□□□□ -0.91
CHD1-206ENST00000511067 LBRQ14739 615 aaKnown RBP9.39□□□□□ -0.91
CHD1-206ENST00000511067 BTLAQ7Z6A9 289 aa9.39□□□□□ -0.91
CHD1-206ENST00000511067 NLRP8Q86W28 1048 aa9.39□□□□□ -0.91
CHD1-206ENST00000511067 PIK3R5Q8WYR1 880 aa9.39□□□□□ -0.91
CHD1-206ENST00000511067 H3BM21 787 aa9.38□□□□□ -0.91
CHD1-206ENST00000511067 GPR182O15218 404 aa9.38□□□□□ -0.91
CHD1-206ENST00000511067 P4HBP07237 508 aaKnown RBP9.38□□□□□ -0.91
CHD1-206ENST00000511067 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
CHD1-206ENST00000511067 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
CHD1-206ENST00000511067 SAMD5Q5TGI4 173 aa9.38□□□□□ -0.91
CHD1-206ENST00000511067 PGBD3Q8N328 593 aa9.38□□□□□ -0.91
CHD1-206ENST00000511067 GPR152Q8TDT2 470 aa9.38□□□□□ -0.91
CHD1-206ENST00000511067 OPLAHO14841 1288 aa9.37□□□□□ -0.91
CHD1-206ENST00000511067 EPB42P16452 691 aa9.37□□□□□ -0.91
CHD1-206ENST00000511067 INPP5BP32019 993 aa9.37□□□□□ -0.91
CHD1-206ENST00000511067 PLCB3Q01970 1234 aa9.37□□□□□ -0.91
CHD1-206ENST00000511067 LRRC69Q6ZNQ3 347 aa9.37□□□□□ -0.91
CHD1-206ENST00000511067 NUDT16Q96DE0 195 aaKnown RBP9.37□□□□□ -0.91
CHD1-206ENST00000511067 KLRG1Q96E93 195 aa9.37□□□□□ -0.91
CHD1-206ENST00000511067 BCL11AQ9H165 835 aa9.37□□□□□ -0.91
CHD1-206ENST00000511067 GJA3Q9Y6H8 435 aa9.37□□□□□ -0.91
CHD1-206ENST00000511067 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
CHD1-206ENST00000511067 TTC16Q8NEE8 873 aa9.36□□□□□ -0.91
CHD1-206ENST00000511067 GPAMQ9HCL2 828 aa9.36□□□□□ -0.91
CHD1-206ENST00000511067 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
CHD1-206ENST00000511067 FNDC3AQ9Y2H6 1198 aaKnown RBP9.36□□□□□ -0.91
CHD1-206ENST00000511067 SENP3-EIF4A1A0A087X0R7 540 aa9.35□□□□□ -0.91
CHD1-206ENST00000511067 NEFLP07196 543 aa9.35□□□□□ -0.91
CHD1-206ENST00000511067 TYRO3Q06418 890 aa9.35□□□□□ -0.91
CHD1-206ENST00000511067 EFHC2Q5JST6 749 aa9.35□□□□□ -0.91
CHD1-206ENST00000511067 RUBCNLQ9H714 662 aa9.35□□□□□ -0.91
CHD1-206ENST00000511067 VAMP1P23763 118 aa9.33□□□□□ -0.92
CHD1-206ENST00000511067 GMPRP36959 345 aa9.33□□□□□ -0.92
CHD1-206ENST00000511067 ATP2B2Q01814 1243 aa9.33□□□□□ -0.92
CHD1-206ENST00000511067 PDE12Q6L8Q7 609 aaKnown RBP9.33□□□□□ -0.92
CHD1-206ENST00000511067 FIGNL1Q6PIW4 674 aa9.33□□□□□ -0.92
CHD1-206ENST00000511067 XKR5Q6UX68 686 aa9.33□□□□□ -0.92
CHD1-206ENST00000511067 MRRFQ96E11 262 aaKnown RBP9.33□□□□□ -0.92
CHD1-206ENST00000511067 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
CHD1-206ENST00000511067 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
CHD1-206ENST00000511067 PRPF40AO75400 957 aaKnown RBP9.32□□□□□ -0.92
CHD1-206ENST00000511067 LDHBP07195 334 aaKnown RBP9.32□□□□□ -0.92
CHD1-206ENST00000511067 MAPK8P45983 427 aa9.32□□□□□ -0.92
CHD1-206ENST00000511067 ENOX2Q16206 610 aaKnown RBP9.32□□□□□ -0.92
CHD1-206ENST00000511067 C8orf34Q49A92 452 aa9.32□□□□□ -0.92
CHD1-206ENST00000511067 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
CHD1-206ENST00000511067 NIF3L1Q9GZT8 377 aa9.32□□□□□ -0.92
CHD1-206ENST00000511067 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
CHD1-206ENST00000511067 SLC35F4A4IF30 521 aa9.31□□□□□ -0.92
CHD1-206ENST00000511067 FAM157BP0CG42 384 aa9.31□□□□□ -0.92
CHD1-206ENST00000511067 ITGAEP38570 1179 aa9.31□□□□□ -0.92
CHD1-206ENST00000511067 PTSQ03393 145 aa9.31□□□□□ -0.92
CHD1-206ENST00000511067 DNAJC25Q9H1X3 360 aa9.31□□□□□ -0.92
CHD1-206ENST00000511067 KIAA1522Q9P206 1035 aaPredicted RBP9.31□□□□□ -0.92
CHD1-206ENST00000511067 KCNMB2Q9Y691 235 aa9.31□□□□□ -0.92
CHD1-206ENST00000511067 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
CHD1-206ENST00000511067 H7C1W4 665 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 EGFRP00533 1210 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 KCNQ4P56696 695 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 TRIP4Q15650 581 aaPredicted RBP9.3□□□□□ -0.92
CHD1-206ENST00000511067 ALG1LQ6GMV1 187 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 FBF1Q8TES7 1133 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 CSRNP1Q96S65 589 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 BRD7Q9NPI1 651 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
CHD1-206ENST00000511067 PPFIA3O75145 1194 aa9.29□□□□□ -0.92
CHD1-206ENST00000511067 TAGLNQ01995 201 aaKnown RBP9.29□□□□□ -0.92
CHD1-206ENST00000511067 CMTR1Q8N1G2 835 aaKnown RBP9.29□□□□□ -0.92
CHD1-206ENST00000511067 SNX29Q8TEQ0 813 aa9.29□□□□□ -0.92
CHD1-206ENST00000511067 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
CHD1-206ENST00000511067 UBAP1LF5GYI3 381 aa9.28□□□□□ -0.92
CHD1-206ENST00000511067 EFSO43281 561 aa9.28□□□□□ -0.92
CHD1-206ENST00000511067 GRNP28799 593 aaKnown RBP9.28□□□□□ -0.92
CHD1-206ENST00000511067 LAMC2Q13753 1193 aa9.28□□□□□ -0.92
CHD1-206ENST00000511067 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
CHD1-206ENST00000511067 ZNF438Q7Z4V0 828 aa9.28□□□□□ -0.92
CHD1-206ENST00000511067 ZCCHC2Q9C0B9 1178 aaKnown RBP9.28□□□□□ -0.92
CHD1-206ENST00000511067 NUCKS1Q9H1E3 243 aaKnown RBP9.28□□□□□ -0.92
CHD1-206ENST00000511067 PCDHGC4Q9Y5F7 938 aa9.28□□□□□ -0.92
CHD1-206ENST00000511067 ATXN7O15265 892 aaPredicted RBP9.27□□□□□ -0.93
CHD1-206ENST00000511067 TRIM22Q8IYM9 498 aa9.27□□□□□ -0.93
CHD1-206ENST00000511067 CCDC155Q8N6L0 562 aa9.27□□□□□ -0.93
CHD1-206ENST00000511067 KCNH4Q9UQ05 1017 aa9.27□□□□□ -0.93
CHD1-206ENST00000511067 USP20Q9Y2K6 914 aa9.27□□□□□ -0.93
CHD1-206ENST00000511067 A6NHS1 94 aa9.26□□□□□ -0.93
CHD1-206ENST00000511067 EIF1AYO14602 144 aaKnown RBP9.26□□□□□ -0.93
CHD1-206ENST00000511067 CPNE3O75131 537 aaKnown RBP9.26□□□□□ -0.93
CHD1-206ENST00000511067 XYLBO75191 536 aa9.26□□□□□ -0.93
CHD1-206ENST00000511067 TNFRSF21O75509 655 aa9.26□□□□□ -0.93
CHD1-206ENST00000511067 THBS1P07996 1170 aa9.26□□□□□ -0.93
CHD1-206ENST00000511067 ORC1Q13415 861 aa9.26□□□□□ -0.93
CHD1-206ENST00000511067 UBAP2LQ14157 1087 aaKnown RBP9.26□□□□□ -0.93
CHD1-206ENST00000511067 ELP3Q9H9T3 547 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms