RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 MEIS3Q99687 375 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 BACH2Q9BYV9 841 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 UPF3BQ9BZI7 483 aaKnown RBP8.37□□□□□ -1.07
KDM3B-207ENST00000510866 ARHGEF12Q9NZN5 1544 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC144CPQ8IYA2 1237 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 VEZTQ9HBM0 779 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 SBNO1A3KN83 1393 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 GPS2Q13227 327 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 CARD14Q9BXL6 1004 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 ZC3H12CQ9C0D7 883 aaKnown RBP8.37□□□□□ -1.07
KDM3B-207ENST00000510866 LTKP29376 864 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC173Q0VFZ6 552 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 RHPN1Q8TCX5 695 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 PODXL2Q9NZ53 605 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 NSFL1CQ9UNZ2 370 aaKnown RBP8.36□□□□□ -1.07
KDM3B-207ENST00000510866 POLR3AO14802 1390 aaPredicted RBP8.36□□□□□ -1.07
KDM3B-207ENST00000510866 ZNHIT6Q9NWK9 470 aaKnown RBP8.36□□□□□ -1.07
KDM3B-207ENST00000510866 APBA3O96018 575 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 NASPP49321 788 aaPredicted RBP8.36□□□□□ -1.07
KDM3B-207ENST00000510866 GUCY1B3Q02153 619 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 C8orf76Q96K31 380 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 SLC4A4Q9Y6R1 1079 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 IL15P40933 162 aaPredicted RBP8.36□□□□□ -1.07
KDM3B-207ENST00000510866 CCT2P78371 535 aaKnown RBP8.36□□□□□ -1.07
KDM3B-207ENST00000510866 NAA16Q6N069 864 aaPredicted RBP8.36□□□□□ -1.07
KDM3B-207ENST00000510866 CNBD1Q8NA66 436 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 TSPY3P0CV98 308 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 TSPY8P0CW00 308 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 KIF5BP33176 963 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 DHX8Q14562 1220 aaKnown RBP8.36□□□□□ -1.07
KDM3B-207ENST00000510866 TEX35Q5T0J7 233 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 TESK2Q96S53 571 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 EYA3Q99504 573 aa8.36□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC192P0DO97 292 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 ARHGAP45Q92619 1136 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC194A0A1B0GVG4 234 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
KDM3B-207ENST00000510866 NF2P35240 595 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 PRIM1P49642 420 aaKnown RBP8.35□□□□□ -1.07
KDM3B-207ENST00000510866 CWF19L2Q2TBE0 894 aaKnown RBP8.35□□□□□ -1.07
KDM3B-207ENST00000510866 NOM1Q5C9Z4 860 aaKnown RBP8.35□□□□□ -1.07
KDM3B-207ENST00000510866 ANKRD2Q9GZV1 360 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 RDXP35241 583 aaKnown RBP8.35□□□□□ -1.07
KDM3B-207ENST00000510866 TMEM266Q2M3C6 531 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 MNS1Q8NEH6 495 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 PHACTR3Q96KR7 559 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 SEPT11Q9NVA2 429 aaKnown RBP8.35□□□□□ -1.07
KDM3B-207ENST00000510866 ZCCHC11Q5TAX3 1644 aaKnown RBP8.35□□□□□ -1.07
KDM3B-207ENST00000510866 PPFIBP1Q86W92 1011 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
KDM3B-207ENST00000510866 DEF6Q9H4E7 631 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC39Q9UFE4 941 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 FERMT3Q86UX7 667 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 NCOA7Q8NI08 942 aa8.35□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC12Q8WUD4 166 aaPredicted RBP8.34□□□□□ -1.07
KDM3B-207ENST00000510866 SH2B1Q9NRF2 756 aaPredicted RBP8.34□□□□□ -1.07
KDM3B-207ENST00000510866 PA2G4Q9UQ80 394 aaKnown RBP8.34□□□□□ -1.07
KDM3B-207ENST00000510866 KAT6BQ8WYB5 2073 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 KRT24Q2M2I5 525 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 GJA3Q9Y6H8 435 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 PIK3C2GO75747 1445 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 BAG4O95429 457 aaKnown RBP8.34□□□□□ -1.07
KDM3B-207ENST00000510866 PKNOX2Q96KN3 472 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 MAP7D2Q96T17 732 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 MPHOSPH6Q99547 160 aaKnown RBP8.34□□□□□ -1.07
KDM3B-207ENST00000510866 LARP6Q9BRS8 491 aaKnown RBP8.34□□□□□ -1.07
KDM3B-207ENST00000510866 PHAXQ9H814 394 aaKnown RBP8.34□□□□□ -1.07
KDM3B-207ENST00000510866 RAB11FIP4Q86YS3 637 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 LINS1Q8NG48 757 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 PLEKHH1Q9ULM0 1364 aa8.34□□□□□ -1.07
KDM3B-207ENST00000510866 ABCA8O94911 1581 aa8.34□□□□□ -1.08
KDM3B-207ENST00000510866 MAGEB6P1A0A0J9YX57 407 aa8.34□□□□□ -1.08
KDM3B-207ENST00000510866 ZNF790Q6PG37 636 aa8.34□□□□□ -1.08
KDM3B-207ENST00000510866 RAB34Q9BZG1 259 aa8.34□□□□□ -1.08
KDM3B-207ENST00000510866 UBA5Q9GZZ9 404 aa8.34□□□□□ -1.08
KDM3B-207ENST00000510866 NPHP4O75161 1426 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-207ENST00000510866 PDIA4P13667 645 aaKnown RBP8.33□□□□□ -1.08
KDM3B-207ENST00000510866 BAG6P46379 1132 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 SKAP1Q86WV1 359 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 RUFY1Q96T51 708 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 STX8Q9UNK0 236 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 PARD3Q8TEW0 1356 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 ZFYP08048 801 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-207ENST00000510866 TRIM21P19474 475 aaKnown RBP8.33□□□□□ -1.08
KDM3B-207ENST00000510866 ATP8B2P98198 1209 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 TTC22Q5TAA0 569 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 PLCD4Q9BRC7 762 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 JAG2Q9Y219 1238 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 ARHGEF5Q12774 1597 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 MICU3Q86XE3 530 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 SPC24Q8NBT2 197 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 NUP62CLQ9H1M0 184 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 KDM5DQ9BY66 1539 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 LIG1P18858 919 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 METAP2P50579 478 aaKnown RBP eCLIP8.33□□□□□ -1.086e-6■□□□□ 10.3
KDM3B-207ENST00000510866 TSPYL6Q8N831 410 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 SLC52A2Q9HAB3 445 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 SLC9C2Q5TAH2 1124 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms