RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 NPR1P16066 1061 aa15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 GTF2E1P29083 439 aaPredicted RBP15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 KSR2Q6VAB6 950 aa15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 ARHGAP27Q6ZUM4 889 aa15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 SYNE4Q8N205 404 aa15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 CNKSR1Q969H4 720 aa15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 CDCA7LQ96GN5 454 aa15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 METTL22Q9BUU2 404 aaPredicted RBP15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
HMGXB3-203ENST00000510472 NUP98P52948 1817 aa15.1■□□□□ 0.01
HMGXB3-203ENST00000510472 ANKRD31Q8N7Z5 1873 aa15.1■□□□□ 0.01
HMGXB3-203ENST00000510472 ATP5J2-PTCD1G3V325 749 aa15.1■□□□□ 0.01
HMGXB3-203ENST00000510472 RIC3Q7Z5B4 369 aa15.1■□□□□ 0.01
HMGXB3-203ENST00000510472 BRCA1P38398 1863 aaKnown RBP15.1■□□□□ 0.01
HMGXB3-203ENST00000510472 PI4KAP2A4QPH2 592 aa15.09■□□□□ 0.01
HMGXB3-203ENST00000510472 DDX58O95786 925 aaKnown RBP15.09■□□□□ 0.01
HMGXB3-203ENST00000510472 PI4KAP1Q8N8J0 262 aa15.09■□□□□ 0.01
HMGXB3-203ENST00000510472 TRMT112Q9UI30 125 aaKnown RBP15.09■□□□□ 0.01
HMGXB3-203ENST00000510472 ADCY9O60503 1353 aa15.09■□□□□ 0.01
HMGXB3-203ENST00000510472 FLIIQ13045 1269 aa15.08■□□□□ 0
HMGXB3-203ENST00000510472 PRPF40BQ6NWY9 871 aaKnown RBP15.08■□□□□ 0
HMGXB3-203ENST00000510472 ZNF784Q8NCA9 323 aaPredicted RBP15.08■□□□□ 0
HMGXB3-203ENST00000510472 MAP3K2Q9Y2U5 619 aa15.08■□□□□ 0
HMGXB3-203ENST00000510472 SH3TC1Q8TE82 1336 aa15.08■□□□□ 0
HMGXB3-203ENST00000510472 C21orf2O43822 256 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 IGKV5-2P06315 115 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 ALDH1B1P30837 517 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 PRELPP51888 382 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 FAM89AQ96GI7 184 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 NLRP3Q96P20 1036 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 CRAMP1Q96RY5 1269 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 MYD88Q99836 296 aa15.07■□□□□ 0
HMGXB3-203ENST00000510472 NFKBIEO00221 500 aa15.06■□□□□ 0
HMGXB3-203ENST00000510472 HCLS1P14317 486 aaPredicted RBP15.06■□□□□ 0
HMGXB3-203ENST00000510472 ZBTB38Q8NAP3 1195 aaPredicted RBP15.05■□□□□ -0
HMGXB3-203ENST00000510472 ZNF428Q96B54 188 aa15.05■□□□□ -0
HMGXB3-203ENST00000510472 DLEC1Q9Y238 1755 aa15.04■□□□□ -0
HMGXB3-203ENST00000510472 COL11A2P13942 1736 aaPredicted RBP15.04■□□□□ -0
HMGXB3-203ENST00000510472 LTBP3Q9NS15 1303 aa15.04■□□□□ -0
HMGXB3-203ENST00000510472 PCCAP05165 728 aaPredicted RBP15.04■□□□□ -0
HMGXB3-203ENST00000510472 SF3B3Q15393 1217 aaKnown RBP15.04■□□□□ -0
HMGXB3-203ENST00000510472 C9orf131Q5VYM1 1079 aa15.04■□□□□ -0
HMGXB3-203ENST00000510472 CWC25Q9NXE8 425 aaPredicted RBP15.04■□□□□ -0
HMGXB3-203ENST00000510472 NEURL1BA8MQ27 555 aa15.03■□□□□ -0
HMGXB3-203ENST00000510472 RASSF7Q02833 373 aa15.03■□□□□ -0
HMGXB3-203ENST00000510472 SOGA3Q5TF21 947 aa15.03■□□□□ -0
HMGXB3-203ENST00000510472 MRPL50Q8N5N7 158 aaKnown RBP15.03■□□□□ -0
HMGXB3-203ENST00000510472 DNAAF4Q8WXU2 420 aa15.03■□□□□ -0
HMGXB3-203ENST00000510472 RPGRQ92834 1020 aaKnown RBP15.03■□□□□ -0
HMGXB3-203ENST00000510472 RBM17Q96I25 401 aaKnown RBP15.03■□□□□ -0
HMGXB3-203ENST00000510472 ARFGEF1Q9Y6D6 1849 aa15.03■□□□□ -0
HMGXB3-203ENST00000510472 TNRC6CQ9HCJ0 1690 aaKnown RBP15.03■□□□□ -0
HMGXB3-203ENST00000510472 SNED1Q8TER0 1413 aa15.02■□□□□ -0
HMGXB3-203ENST00000510472 CHD4Q14839 1912 aa15.02■□□□□ -0
HMGXB3-203ENST00000510472 H7C1W4 665 aa15.02■□□□□ -0
HMGXB3-203ENST00000510472 IRS4O14654 1257 aaPredicted RBP15.02■□□□□ -0
HMGXB3-203ENST00000510472 LMNB1P20700 586 aa15.02■□□□□ -0
HMGXB3-203ENST00000510472 FKBP5Q13451 457 aaPredicted RBP15.02■□□□□ -0
HMGXB3-203ENST00000510472 CWF19L2Q2TBE0 894 aaKnown RBP15.02■□□□□ -0
HMGXB3-203ENST00000510472 OLFM4Q6UX06 510 aa15.02■□□□□ -0
HMGXB3-203ENST00000510472 SSH1Q8WYL5 1049 aa15.02■□□□□ -0
HMGXB3-203ENST00000510472 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
HMGXB3-203ENST00000510472 SLX4Q8IY92 1834 aa15.01□□□□□ -0.01
HMGXB3-203ENST00000510472 BBOX1O75936 387 aa15.01□□□□□ -0.01
HMGXB3-203ENST00000510472 CT47B1P0C2W7 299 aaPredicted RBP15.01□□□□□ -0.01
HMGXB3-203ENST00000510472 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
HMGXB3-203ENST00000510472 BEND3Q5T5X7 828 aa15.01□□□□□ -0.01
HMGXB3-203ENST00000510472 LINS1Q8NG48 757 aa15.01□□□□□ -0.01
HMGXB3-203ENST00000510472 ABCC4O15439 1325 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 F6X3S4 739 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 CASP7P55210 303 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 C1QTNF8P60827 252 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 NEXNQ0ZGT2 675 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 GCKRQ14397 625 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 CCDC93Q567U6 631 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 CC2D2BQ6DHV5 1058 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 SLC51AQ86UW1 340 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 RTKN2Q8IZC4 609 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 JARID2Q92833 1246 aaPredicted RBP15□□□□□ -0.01
HMGXB3-203ENST00000510472 RNF181Q9P0P0 153 aa15□□□□□ -0.01
HMGXB3-203ENST00000510472 CDHR2Q9BYE9 1310 aa14.99□□□□□ -0.01
HMGXB3-203ENST00000510472 ANKRD36CQ5JPF3 1778 aa14.99□□□□□ -0.01
HMGXB3-203ENST00000510472 BRPF1P55201 1214 aaPredicted RBP14.99□□□□□ -0.01
HMGXB3-203ENST00000510472 HNRNPUQ00839 825 aaKnown RBP eCLIP14.99□□□□□ -0.01
HMGXB3-203ENST00000510472 ALDH1L2Q3SY69 923 aa14.99□□□□□ -0.01
HMGXB3-203ENST00000510472 TAOK3Q9H2K8 898 aa14.99□□□□□ -0.01
HMGXB3-203ENST00000510472 ATP6V0A2Q9Y487 856 aa14.99□□□□□ -0.01
HMGXB3-203ENST00000510472 ARFGEF2Q9Y6D5 1785 aa14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 PDE8AO60658 829 aa14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 HSP90B1P14625 803 aaKnown RBP14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 FKBP4Q02790 459 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 GRAPQ13588 217 aa14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 GRIPAP1Q4V328 841 aa14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 DDX46Q7L014 1031 aaKnown RBP14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 GRAPLQ8TC17 118 aaPredicted RBP14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 PSMD1Q99460 953 aa14.98□□□□□ -0.01
HMGXB3-203ENST00000510472 ZC3H4Q9UPT8 1303 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms